RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 NISCHQ9Y2I1 1504 aa30.56■■■□□ 2.48
CCHCR1-205ENST00000428174 CCDC180Q9P1Z9 1646 aa26.97■■□□□ 1.91
CCHCR1-205ENST00000428174 ABCC9O60706 1549 aa26.17■■□□□ 1.78
CCHCR1-205ENST00000428174 ZCCHC6Q5VYS8 1495 aaKnown RBP25.51■■□□□ 1.67
CCHCR1-205ENST00000428174 DCAF8L2P0C7V8 631 aa25.49■■□□□ 1.67
CCHCR1-205ENST00000428174 NACADO15069 1562 aa25.32■■□□□ 1.64
CCHCR1-205ENST00000428174 DCAF1Q9Y4B6 1507 aa25.27■■□□□ 1.64
CCHCR1-205ENST00000428174 RB1CC1Q8TDY2 1594 aa25.27■■□□□ 1.64
CCHCR1-205ENST00000428174 MYO15BQ96JP2 1530 aa25.27■■□□□ 1.64
CCHCR1-205ENST00000428174 SCRIBQ14160 1630 aa24.68■■□□□ 1.54
CCHCR1-205ENST00000428174 UNC13AQ9UPW8 1703 aa24.64■■□□□ 1.53
CCHCR1-205ENST00000428174 PABPN1Q86U42 306 aaKnown RBP eCLIP24.54■■□□□ 1.52
CCHCR1-205ENST00000428174 BICRAQ9NZM4 1560 aa24.48■■□□□ 1.51
CCHCR1-205ENST00000428174 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
CCHCR1-205ENST00000428174 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
CCHCR1-205ENST00000428174 CECR2Q9BXF3 1484 aa23.78■■□□□ 1.4
CCHCR1-205ENST00000428174 DNAJC5BQ9UF47 199 aa23.74■■□□□ 1.39
CCHCR1-205ENST00000428174 BAZ1AQ9NRL2 1556 aaPredicted RBP23.65■■□□□ 1.38
CCHCR1-205ENST00000428174 CC2D2AQ9P2K1 1620 aa23.64■■□□□ 1.38
CCHCR1-205ENST00000428174 SMARCA4P51532 1647 aa23.62■■□□□ 1.37
CCHCR1-205ENST00000428174 MROH2BQ7Z745 1585 aa23.56■■□□□ 1.36
CCHCR1-205ENST00000428174 ATAD2BQ9ULI0 1458 aa23.44■■□□□ 1.34
CCHCR1-205ENST00000428174 SMARCA2P51531 1590 aa23.42■■□□□ 1.34
CCHCR1-205ENST00000428174 RSF1Q96T23 1441 aaPredicted RBP23.42■■□□□ 1.34
CCHCR1-205ENST00000428174 NCAPD3P42695 1498 aa23.38■■□□□ 1.33
CCHCR1-205ENST00000428174 PEG3Q9GZU2 1588 aa23.37■■□□□ 1.33
CCHCR1-205ENST00000428174 WIZO95785 1651 aa23.29■■□□□ 1.32
CCHCR1-205ENST00000428174 BAZ1BQ9UIG0 1483 aaKnown RBP23.27■■□□□ 1.32
CCHCR1-205ENST00000428174 HMGXB3Q12766 1538 aa23.27■■□□□ 1.32
CCHCR1-205ENST00000428174 SUPT5HO00267 1087 aaKnown RBP23.13■■□□□ 1.29
CCHCR1-205ENST00000428174 TOP2AP11388 1531 aaKnown RBP23.08■■□□□ 1.29
CCHCR1-205ENST00000428174 CCDC88BA6NC98 1476 aa22.83■■□□□ 1.25
CCHCR1-205ENST00000428174 CADPSQ9ULU8 1353 aa22.74■■□□□ 1.23
CCHCR1-205ENST00000428174 NESP48681 1621 aa22.71■■□□□ 1.23
CCHCR1-205ENST00000428174 LAMC3Q9Y6N6 1575 aa22.69■■□□□ 1.22
CCHCR1-205ENST00000428174 CFTRP13569 1480 aa22.65■■□□□ 1.22
CCHCR1-205ENST00000428174 PDS5BQ9NTI5 1447 aa22.57■■□□□ 1.2
CCHCR1-205ENST00000428174 ERCC6Q03468 1493 aa22.54■■□□□ 1.2
CCHCR1-205ENST00000428174 FANCD2Q9BXW9 1451 aa22.47■■□□□ 1.19
CCHCR1-205ENST00000428174 PRDM2Q13029 1718 aa22.42■■□□□ 1.18
CCHCR1-205ENST00000428174 KIF21AQ7Z4S6 1674 aa22.41■■□□□ 1.18
CCHCR1-205ENST00000428174 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
CCHCR1-205ENST00000428174 MRC2Q9UBG0 1479 aa22.3■■□□□ 1.16
CCHCR1-205ENST00000428174 THOC2Q8NI27 1593 aaKnown RBP22.26■■□□□ 1.15
CCHCR1-205ENST00000428174 URB2Q14146 1524 aaKnown RBP22.21■■□□□ 1.15
CCHCR1-205ENST00000428174 WDR62O43379 1518 aa22.19■■□□□ 1.14
CCHCR1-205ENST00000428174 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
CCHCR1-205ENST00000428174 CUX2O14529 1486 aa22.15■■□□□ 1.14
CCHCR1-205ENST00000428174 TOPBP1Q92547 1522 aa22.13■■□□□ 1.13
CCHCR1-205ENST00000428174 DNMBPQ6XZF7 1577 aa22.12■■□□□ 1.13
CCHCR1-205ENST00000428174 WRNQ14191 1432 aaPredicted RBP eCLIP22.08■■□□□ 1.13
CCHCR1-205ENST00000428174 CUX1P39880 1505 aa22.07■■□□□ 1.12
CCHCR1-205ENST00000428174 POLA1P09884 1462 aaPredicted RBP21.96■■□□□ 1.11
CCHCR1-205ENST00000428174 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
CCHCR1-205ENST00000428174 SYNJ1O43426 1573 aa21.96■■□□□ 1.11
CCHCR1-205ENST00000428174 TOP2BQ02880 1626 aa21.95■■□□□ 1.1
CCHCR1-205ENST00000428174 IFT140Q96RY7 1462 aa21.93■■□□□ 1.1
CCHCR1-205ENST00000428174 BIVM-ERCC5R4GMW8 1640 aa21.93■■□□□ 1.1
CCHCR1-205ENST00000428174 SOGA1O94964 1423 aa21.91■■□□□ 1.1
CCHCR1-205ENST00000428174 RAD54L2Q9Y4B4 1467 aa21.89■■□□□ 1.09
CCHCR1-205ENST00000428174 TRIM41Q8WV44 630 aa21.83■■□□□ 1.09
CCHCR1-205ENST00000428174 TARBP1Q13395 1621 aaKnown RBP21.83■■□□□ 1.08
CCHCR1-205ENST00000428174 ZNF608Q9ULD9 1512 aaPredicted RBP21.79■■□□□ 1.08
CCHCR1-205ENST00000428174 ABCA10Q8WWZ4 1543 aa21.76■■□□□ 1.07
CCHCR1-205ENST00000428174 CHIC1Q5VXU3 224 aa21.76■■□□□ 1.07
CCHCR1-205ENST00000428174 TDRD9Q8NDG6 1382 aaKnown RBP21.75■■□□□ 1.07
CCHCR1-205ENST00000428174 AQRO60306 1485 aaKnown RBP eCLIP21.73■■□□□ 1.072e-10■■■■■ 47.9
CCHCR1-205ENST00000428174 WDR97A6NE52 1622 aa21.69■■□□□ 1.06
CCHCR1-205ENST00000428174 EIF4G3O43432 1585 aaKnown RBP21.68■■□□□ 1.06
CCHCR1-205ENST00000428174 GAPVD1Q14C86 1478 aa21.64■■□□□ 1.06
CCHCR1-205ENST00000428174 ABCA5Q8WWZ7 1642 aa21.62■■□□□ 1.05
CCHCR1-205ENST00000428174 GRIN2BQ13224 1484 aa21.61■■□□□ 1.05
CCHCR1-205ENST00000428174 KIF27Q86VH2 1401 aa21.61■■□□□ 1.05
CCHCR1-205ENST00000428174 SNAPC4Q5SXM2 1469 aa21.52■■□□□ 1.04
CCHCR1-205ENST00000428174 PBRM1Q86U86 1689 aa21.51■■□□□ 1.03
CCHCR1-205ENST00000428174 MAGI1Q96QZ7 1491 aaPredicted RBP21.5■■□□□ 1.03
CCHCR1-205ENST00000428174 ERICH3Q5RHP9 1530 aa21.5■■□□□ 1.03
CCHCR1-205ENST00000428174 RUSC2Q8N2Y8 1516 aa21.49■■□□□ 1.03
CCHCR1-205ENST00000428174 IGF1RP08069 1367 aa21.48■■□□□ 1.03
CCHCR1-205ENST00000428174 FBLN2P98095 1184 aa21.46■■□□□ 1.03
CCHCR1-205ENST00000428174 CHMP7Q8WUX9 453 aaPredicted RBP21.44■■□□□ 1.02
CCHCR1-205ENST00000428174 FHAD1B1AJZ9 1412 aa21.42■■□□□ 1.02
CCHCR1-205ENST00000428174 SYNJ2O15056 1496 aa21.41■■□□□ 1.02
CCHCR1-205ENST00000428174 EEA1Q15075 1411 aa21.4■■□□□ 1.02
CCHCR1-205ENST00000428174 ADAMTS12P58397 1594 aa21.4■■□□□ 1.02
CCHCR1-205ENST00000428174 FAM9AQ8IZU1 332 aaPredicted RBP21.38■■□□□ 1.01
CCHCR1-205ENST00000428174 CARMIL1Q5VZK9 1371 aa21.36■■□□□ 1.01
CCHCR1-205ENST00000428174 CSRNP3Q8WYN3 585 aa21.36■■□□□ 1.01
CCHCR1-205ENST00000428174 OSCARQ8IYS5 282 aa21.35■■□□□ 1.01
CCHCR1-205ENST00000428174 CUL7Q14999 1698 aa21.34■■□□□ 1.01
CCHCR1-205ENST00000428174 CHD1O14646 1710 aa21.33■■□□□ 1.01
CCHCR1-205ENST00000428174 GRIN2AQ12879 1464 aa21.31■■□□□ 1
CCHCR1-205ENST00000428174 RAPGEF2Q9Y4G8 1499 aa21.26■□□□□ 0.99
CCHCR1-205ENST00000428174 PRXQ9BXM0 1461 aa21.25■□□□□ 0.99
CCHCR1-205ENST00000428174 NUP160Q12769 1436 aa21.21■□□□□ 0.99
CCHCR1-205ENST00000428174 CEP170Q5SW79 1584 aa21.17■□□□□ 0.98
CCHCR1-205ENST00000428174 DNAJC5Q9H3Z4 198 aa21.14■□□□□ 0.97
CCHCR1-205ENST00000428174 CLASP1Q7Z460 1538 aa21.14■□□□□ 0.97
CCHCR1-205ENST00000428174 KIF21BO75037 1637 aa21.11■□□□□ 0.97
CCHCR1-205ENST00000428174 KIAA0586Q9BVV6 1533 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms