RNA–Protein interactions for RNA: ENST00000428007.1

PAICSP3-201, Transcript of phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 3, humanhuman

BASIC

Gene PAICSP3, Length 1,168 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAICSP3-201ENST00000428007 AEBP2Q6ZN18 517 aaPredicted RBP22.21■■□□□ 1.15
PAICSP3-201ENST00000428007 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
PAICSP3-201ENST00000428007 NISCHQ9Y2I1 1504 aa21.24■□□□□ 0.99
PAICSP3-201ENST00000428007 PHF23Q9BUL5 403 aaPredicted RBP19.66■□□□□ 0.74
PAICSP3-201ENST00000428007 CCDC180Q9P1Z9 1646 aa18.89■□□□□ 0.61
PAICSP3-201ENST00000428007 SENP3Q9H4L4 574 aaPredicted RBP18.57■□□□□ 0.56
PAICSP3-201ENST00000428007 ABCC9O60706 1549 aa18.28■□□□□ 0.52
PAICSP3-201ENST00000428007 PLPPR3Q6T4P5 718 aa18.19■□□□□ 0.5
PAICSP3-201ENST00000428007 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
PAICSP3-201ENST00000428007 NACADO15069 1562 aa17.82■□□□□ 0.44
PAICSP3-201ENST00000428007 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
PAICSP3-201ENST00000428007 DCAF1Q9Y4B6 1507 aa17.72■□□□□ 0.43
PAICSP3-201ENST00000428007 DCAF8L2P0C7V8 631 aa17.69■□□□□ 0.42
PAICSP3-201ENST00000428007 ZCCHC6Q5VYS8 1495 aaKnown RBP17.69■□□□□ 0.42
PAICSP3-201ENST00000428007 FOXD1Q16676 465 aa17.29■□□□□ 0.36
PAICSP3-201ENST00000428007 ADRA2BP18089 450 aa17.24■□□□□ 0.35
PAICSP3-201ENST00000428007 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
PAICSP3-201ENST00000428007 PPP6R1Q9UPN7 881 aa17.18■□□□□ 0.34
PAICSP3-201ENST00000428007 UNC13AQ9UPW8 1703 aa17.11■□□□□ 0.33
PAICSP3-201ENST00000428007 PABPN1Q86U42 306 aaKnown RBP eCLIP17.09■□□□□ 0.33
PAICSP3-201ENST00000428007 BICRAQ9NZM4 1560 aa17.07■□□□□ 0.32
PAICSP3-201ENST00000428007 SCRIBQ14160 1630 aa17.06■□□□□ 0.32
PAICSP3-201ENST00000428007 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
PAICSP3-201ENST00000428007 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
PAICSP3-201ENST00000428007 CC2D2AQ9P2K1 1620 aa16.57■□□□□ 0.24
PAICSP3-201ENST00000428007 KCNA4P22459 653 aa16.57■□□□□ 0.24
PAICSP3-201ENST00000428007 CECR2Q9BXF3 1484 aa16.52■□□□□ 0.23
PAICSP3-201ENST00000428007 BAZ1AQ9NRL2 1556 aaPredicted RBP16.51■□□□□ 0.23
PAICSP3-201ENST00000428007 NCAPD3P42695 1498 aa16.44■□□□□ 0.22
PAICSP3-201ENST00000428007 SMARCA2P51531 1590 aa16.43■□□□□ 0.22
PAICSP3-201ENST00000428007 PIAS4Q8N2W9 510 aaPredicted RBP16.43■□□□□ 0.22
PAICSP3-201ENST00000428007 SMARCA4P51532 1647 aa16.41■□□□□ 0.22
PAICSP3-201ENST00000428007 ATAD2BQ9ULI0 1458 aa16.37■□□□□ 0.21
PAICSP3-201ENST00000428007 PEG3Q9GZU2 1588 aa16.36■□□□□ 0.21
PAICSP3-201ENST00000428007 HMGXB3Q12766 1538 aa16.33■□□□□ 0.2
PAICSP3-201ENST00000428007 MROH2BQ7Z745 1585 aa16.26■□□□□ 0.19
PAICSP3-201ENST00000428007 BAZ1BQ9UIG0 1483 aaKnown RBP16.25■□□□□ 0.19
PAICSP3-201ENST00000428007 PPP4R3CPQ6ZMV5 832 aa16.19■□□□□ 0.18
PAICSP3-201ENST00000428007 RSF1Q96T23 1441 aaPredicted RBP16.19■□□□□ 0.18
PAICSP3-201ENST00000428007 EHMT2Q96KQ7 1210 aa16.16■□□□□ 0.18
PAICSP3-201ENST00000428007 WIZO95785 1651 aa16.04■□□□□ 0.16
PAICSP3-201ENST00000428007 TOP2AP11388 1531 aaKnown RBP16.02■□□□□ 0.15
PAICSP3-201ENST00000428007 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.15
PAICSP3-201ENST00000428007 CADPSQ9ULU8 1353 aa15.96■□□□□ 0.15
PAICSP3-201ENST00000428007 PDS5BQ9NTI5 1447 aa15.94■□□□□ 0.14
PAICSP3-201ENST00000428007 ERCC6Q03468 1493 aa15.88■□□□□ 0.13
PAICSP3-201ENST00000428007 CFTRP13569 1480 aa15.84■□□□□ 0.13
PAICSP3-201ENST00000428007 CCDC88BA6NC98 1476 aa15.8■□□□□ 0.12
PAICSP3-201ENST00000428007 NCBP3Q53F19 620 aaKnown RBP15.8■□□□□ 0.12
PAICSP3-201ENST00000428007 SLC4A1APQ9BWU0 796 aaKnown RBP15.8■□□□□ 0.12
PAICSP3-201ENST00000428007 NESP48681 1621 aa15.78■□□□□ 0.12
PAICSP3-201ENST00000428007 CUX2O14529 1486 aa15.78■□□□□ 0.12
PAICSP3-201ENST00000428007 SUPT5HO00267 1087 aaKnown RBP15.77■□□□□ 0.12
PAICSP3-201ENST00000428007 NPM3O75607 178 aaKnown RBP15.73■□□□□ 0.11
PAICSP3-201ENST00000428007 FANCD2Q9BXW9 1451 aa15.7■□□□□ 0.1
PAICSP3-201ENST00000428007 CEP164Q9UPV0 1460 aa15.7■□□□□ 0.1
PAICSP3-201ENST00000428007 MRC2Q9UBG0 1479 aa15.65■□□□□ 0.1
PAICSP3-201ENST00000428007 CSRNP3Q8WYN3 585 aa15.65■□□□□ 0.1
PAICSP3-201ENST00000428007 ABCC8Q09428 1581 aa15.65■□□□□ 0.1
PAICSP3-201ENST00000428007 PRDM2Q13029 1718 aa15.61■□□□□ 0.09
PAICSP3-201ENST00000428007 THOC2Q8NI27 1593 aaKnown RBP15.58■□□□□ 0.09
PAICSP3-201ENST00000428007 KIF21AQ7Z4S6 1674 aa15.58■□□□□ 0.08
PAICSP3-201ENST00000428007 WDR62O43379 1518 aa15.58■□□□□ 0.08
PAICSP3-201ENST00000428007 MSH5O43196 834 aa15.55■□□□□ 0.08
PAICSP3-201ENST00000428007 CNKSR2Q8WXI2 1034 aa15.53■□□□□ 0.08
PAICSP3-201ENST00000428007 SCAF1Q9H7N4 1312 aaKnown RBP15.47■□□□□ 0.07
PAICSP3-201ENST00000428007 URB2Q14146 1524 aaKnown RBP15.45■□□□□ 0.06
PAICSP3-201ENST00000428007 MAPK8IP2Q13387 824 aaPredicted RBP15.45■□□□□ 0.06
PAICSP3-201ENST00000428007 DNMBPQ6XZF7 1577 aa15.43■□□□□ 0.06
PAICSP3-201ENST00000428007 TOPBP1Q92547 1522 aa15.43■□□□□ 0.06
PAICSP3-201ENST00000428007 IFT140Q96RY7 1462 aa15.41■□□□□ 0.06
PAICSP3-201ENST00000428007 ZBTB22O15209 634 aa15.31■□□□□ 0.04
PAICSP3-201ENST00000428007 SOGA1O94964 1423 aa15.31■□□□□ 0.04
PAICSP3-201ENST00000428007 WRNQ14191 1432 aaPredicted RBP eCLIP15.31■□□□□ 0.04
PAICSP3-201ENST00000428007 WDR97A6NE52 1622 aa15.31■□□□□ 0.04
PAICSP3-201ENST00000428007 POLA1P09884 1462 aaPredicted RBP15.29■□□□□ 0.04
PAICSP3-201ENST00000428007 CUX1P39880 1505 aa15.27■□□□□ 0.03
PAICSP3-201ENST00000428007 FGD5Q6ZNL6 1462 aa15.25■□□□□ 0.03
PAICSP3-201ENST00000428007 TOP2BQ02880 1626 aa15.22■□□□□ 0.03
PAICSP3-201ENST00000428007 TARBP1Q13395 1621 aaKnown RBP15.21■□□□□ 0.02
PAICSP3-201ENST00000428007 DNAJC5Q9H3Z4 198 aa15.2■□□□□ 0.02
PAICSP3-201ENST00000428007 ABCA10Q8WWZ4 1543 aa15.19■□□□□ 0.02
PAICSP3-201ENST00000428007 BIVM-ERCC5R4GMW8 1640 aa15.19■□□□□ 0.02
PAICSP3-201ENST00000428007 OSCARQ8IYS5 282 aa15.16■□□□□ 0.02
PAICSP3-201ENST00000428007 RAD54L2Q9Y4B4 1467 aa15.15■□□□□ 0.02
PAICSP3-201ENST00000428007 ZNF608Q9ULD9 1512 aaPredicted RBP15.15■□□□□ 0.02
PAICSP3-201ENST00000428007 GRIN2BQ13224 1484 aa15.14■□□□□ 0.01
PAICSP3-201ENST00000428007 AQRO60306 1485 aaKnown RBP eCLIP15.13■□□□□ 0.01
PAICSP3-201ENST00000428007 TDRD9Q8NDG6 1382 aaKnown RBP15.12■□□□□ 0.01
PAICSP3-201ENST00000428007 EIF4G3O43432 1585 aaKnown RBP15.11■□□□□ 0.01
PAICSP3-201ENST00000428007 GAPVD1Q14C86 1478 aa15.11■□□□□ 0.01
PAICSP3-201ENST00000428007 MAGI1Q96QZ7 1491 aaPredicted RBP15.11■□□□□ 0.01
PAICSP3-201ENST00000428007 SYNJ1O43426 1573 aa15.1■□□□□ 0.01
PAICSP3-201ENST00000428007 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
PAICSP3-201ENST00000428007 CHMP7Q8WUX9 453 aaPredicted RBP15.06■□□□□ 0
PAICSP3-201ENST00000428007 ERICH3Q5RHP9 1530 aa15.04■□□□□ -0
PAICSP3-201ENST00000428007 KIF27Q86VH2 1401 aa15.04■□□□□ -0
PAICSP3-201ENST00000428007 ABCA5Q8WWZ7 1642 aa15.03■□□□□ -0
PAICSP3-201ENST00000428007 SYNJ2O15056 1496 aa15.02■□□□□ -0
PAICSP3-201ENST00000428007 TRIM41Q8WV44 630 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms