RNA–Protein interactions for RNA: ENST00000426922.6

LINC01517-201, Transcript of long intergenic non-protein coding RNA 1517, humanhuman

TSL 5 BASIC

Gene LINC01517, Length 980 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01517-201ENST00000426922 NISCHQ9Y2I1 1504 aa26.58■■□□□ 1.85
LINC01517-201ENST00000426922 CCDC180Q9P1Z9 1646 aa23.48■■□□□ 1.35
LINC01517-201ENST00000426922 ABCC9O60706 1549 aa22.83■■□□□ 1.25
LINC01517-201ENST00000426922 DCAF8L2P0C7V8 631 aa22.3■■□□□ 1.16
LINC01517-201ENST00000426922 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
LINC01517-201ENST00000426922 NACADO15069 1562 aa22.07■■□□□ 1.12
LINC01517-201ENST00000426922 RB1CC1Q8TDY2 1594 aa22.05■■□□□ 1.12
LINC01517-201ENST00000426922 MYO15BQ96JP2 1530 aa21.99■■□□□ 1.11
LINC01517-201ENST00000426922 DCAF1Q9Y4B6 1507 aa21.98■■□□□ 1.11
LINC01517-201ENST00000426922 SCRIBQ14160 1630 aa21.47■■□□□ 1.03
LINC01517-201ENST00000426922 UNC13AQ9UPW8 1703 aa21.45■■□□□ 1.02
LINC01517-201ENST00000426922 PABPN1Q86U42 306 aaKnown RBP eCLIP21.42■■□□□ 1.02
LINC01517-201ENST00000426922 BICRAQ9NZM4 1560 aa21.31■■□□□ 1
LINC01517-201ENST00000426922 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
LINC01517-201ENST00000426922 EIF4G1Q04637 1599 aaKnown RBP20.76■□□□□ 0.91
LINC01517-201ENST00000426922 DNAJC5BQ9UF47 199 aa20.75■□□□□ 0.91
LINC01517-201ENST00000426922 CECR2Q9BXF3 1484 aa20.67■□□□□ 0.9
LINC01517-201ENST00000426922 CC2D2AQ9P2K1 1620 aa20.62■□□□□ 0.89
LINC01517-201ENST00000426922 BAZ1AQ9NRL2 1556 aaPredicted RBP20.59■□□□□ 0.89
LINC01517-201ENST00000426922 SMARCA4P51532 1647 aa20.55■□□□□ 0.88
LINC01517-201ENST00000426922 MROH2BQ7Z745 1585 aa20.47■□□□□ 0.87
LINC01517-201ENST00000426922 ATAD2BQ9ULI0 1458 aa20.41■□□□□ 0.86
LINC01517-201ENST00000426922 SMARCA2P51531 1590 aa20.41■□□□□ 0.86
LINC01517-201ENST00000426922 NCAPD3P42695 1498 aa20.37■□□□□ 0.85
LINC01517-201ENST00000426922 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
LINC01517-201ENST00000426922 PEG3Q9GZU2 1588 aa20.33■□□□□ 0.84
LINC01517-201ENST00000426922 BAZ1BQ9UIG0 1483 aaKnown RBP20.28■□□□□ 0.84
LINC01517-201ENST00000426922 WIZO95785 1651 aa20.26■□□□□ 0.83
LINC01517-201ENST00000426922 HMGXB3Q12766 1538 aa20.26■□□□□ 0.83
LINC01517-201ENST00000426922 SUPT5HO00267 1087 aaKnown RBP20.13■□□□□ 0.81
LINC01517-201ENST00000426922 TOP2AP11388 1531 aaKnown RBP20.06■□□□□ 0.8
LINC01517-201ENST00000426922 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
LINC01517-201ENST00000426922 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.76
LINC01517-201ENST00000426922 NESP48681 1621 aa19.8■□□□□ 0.76
LINC01517-201ENST00000426922 LAMC3Q9Y6N6 1575 aa19.79■□□□□ 0.76
LINC01517-201ENST00000426922 CFTRP13569 1480 aa19.72■□□□□ 0.75
LINC01517-201ENST00000426922 PDS5BQ9NTI5 1447 aa19.71■□□□□ 0.75
LINC01517-201ENST00000426922 ERCC6Q03468 1493 aa19.7■□□□□ 0.74
LINC01517-201ENST00000426922 FANCD2Q9BXW9 1451 aa19.58■□□□□ 0.72
LINC01517-201ENST00000426922 KIF21AQ7Z4S6 1674 aa19.53■□□□□ 0.72
LINC01517-201ENST00000426922 CEP164Q9UPV0 1460 aa19.53■□□□□ 0.72
LINC01517-201ENST00000426922 PRDM2Q13029 1718 aa19.51■□□□□ 0.71
LINC01517-201ENST00000426922 MRC2Q9UBG0 1479 aa19.44■□□□□ 0.7
LINC01517-201ENST00000426922 THOC2Q8NI27 1593 aaKnown RBP19.39■□□□□ 0.69
LINC01517-201ENST00000426922 CUX2O14529 1486 aa19.35■□□□□ 0.69
LINC01517-201ENST00000426922 ABCC8Q09428 1581 aa19.34■□□□□ 0.69
LINC01517-201ENST00000426922 WDR62O43379 1518 aa19.33■□□□□ 0.68
LINC01517-201ENST00000426922 URB2Q14146 1524 aaKnown RBP19.33■□□□□ 0.68
LINC01517-201ENST00000426922 TOPBP1Q92547 1522 aa19.26■□□□□ 0.67
LINC01517-201ENST00000426922 DNMBPQ6XZF7 1577 aa19.25■□□□□ 0.67
LINC01517-201ENST00000426922 WRNQ14191 1432 aaPredicted RBP eCLIP19.21■□□□□ 0.67
LINC01517-201ENST00000426922 CUX1P39880 1505 aa19.19■□□□□ 0.66
LINC01517-201ENST00000426922 POLA1P09884 1462 aaPredicted RBP19.11■□□□□ 0.65
LINC01517-201ENST00000426922 FGD5Q6ZNL6 1462 aa19.11■□□□□ 0.65
LINC01517-201ENST00000426922 IFT140Q96RY7 1462 aa19.11■□□□□ 0.65
LINC01517-201ENST00000426922 SOGA1O94964 1423 aa19.11■□□□□ 0.65
LINC01517-201ENST00000426922 TOP2BQ02880 1626 aa19.09■□□□□ 0.65
LINC01517-201ENST00000426922 SYNJ1O43426 1573 aa19.08■□□□□ 0.65
LINC01517-201ENST00000426922 BIVM-ERCC5R4GMW8 1640 aa19.06■□□□□ 0.64
LINC01517-201ENST00000426922 RAD54L2Q9Y4B4 1467 aa19.04■□□□□ 0.64
LINC01517-201ENST00000426922 TARBP1Q13395 1621 aaKnown RBP19.01■□□□□ 0.63
LINC01517-201ENST00000426922 TRIM41Q8WV44 630 aa19.01■□□□□ 0.63
LINC01517-201ENST00000426922 ZNF608Q9ULD9 1512 aaPredicted RBP18.98■□□□□ 0.63
LINC01517-201ENST00000426922 TDRD9Q8NDG6 1382 aaKnown RBP18.96■□□□□ 0.63
LINC01517-201ENST00000426922 AQRO60306 1485 aaKnown RBP eCLIP18.94■□□□□ 0.62
LINC01517-201ENST00000426922 ABCA10Q8WWZ4 1543 aa18.93■□□□□ 0.62
LINC01517-201ENST00000426922 EIF4G3O43432 1585 aaKnown RBP18.89■□□□□ 0.61
LINC01517-201ENST00000426922 WDR97A6NE52 1622 aa18.88■□□□□ 0.61
LINC01517-201ENST00000426922 CHIC1Q5VXU3 224 aa18.87■□□□□ 0.61
LINC01517-201ENST00000426922 GAPVD1Q14C86 1478 aa18.86■□□□□ 0.61
LINC01517-201ENST00000426922 GRIN2BQ13224 1484 aa18.83■□□□□ 0.6
LINC01517-201ENST00000426922 KIF27Q86VH2 1401 aa18.81■□□□□ 0.6
LINC01517-201ENST00000426922 ABCA5Q8WWZ7 1642 aa18.79■□□□□ 0.6
LINC01517-201ENST00000426922 FBLN2P98095 1184 aa18.78■□□□□ 0.6
LINC01517-201ENST00000426922 SNAPC4Q5SXM2 1469 aa18.74■□□□□ 0.59
LINC01517-201ENST00000426922 CHMP7Q8WUX9 453 aaPredicted RBP18.74■□□□□ 0.59
LINC01517-201ENST00000426922 PBRM1Q86U86 1689 aa18.73■□□□□ 0.59
LINC01517-201ENST00000426922 MAGI1Q96QZ7 1491 aaPredicted RBP18.73■□□□□ 0.59
LINC01517-201ENST00000426922 ERICH3Q5RHP9 1530 aa18.72■□□□□ 0.59
LINC01517-201ENST00000426922 OSCARQ8IYS5 282 aa18.7■□□□□ 0.58
LINC01517-201ENST00000426922 IGF1RP08069 1367 aa18.69■□□□□ 0.58
LINC01517-201ENST00000426922 SYNJ2O15056 1496 aa18.66■□□□□ 0.58
LINC01517-201ENST00000426922 FHAD1B1AJZ9 1412 aa18.66■□□□□ 0.58
LINC01517-201ENST00000426922 RUSC2Q8N2Y8 1516 aa18.65■□□□□ 0.58
LINC01517-201ENST00000426922 FAM9AQ8IZU1 332 aaPredicted RBP18.61■□□□□ 0.57
LINC01517-201ENST00000426922 EEA1Q15075 1411 aa18.6■□□□□ 0.57
LINC01517-201ENST00000426922 CARMIL1Q5VZK9 1371 aa18.6■□□□□ 0.57
LINC01517-201ENST00000426922 CSRNP3Q8WYN3 585 aa18.6■□□□□ 0.57
LINC01517-201ENST00000426922 CHD1O14646 1710 aa18.6■□□□□ 0.57
LINC01517-201ENST00000426922 ADAMTS12P58397 1594 aa18.59■□□□□ 0.57
LINC01517-201ENST00000426922 CUL7Q14999 1698 aa18.58■□□□□ 0.57
LINC01517-201ENST00000426922 GRIN2AQ12879 1464 aa18.57■□□□□ 0.56
LINC01517-201ENST00000426922 DNAJC5Q9H3Z4 198 aa18.56■□□□□ 0.56
LINC01517-201ENST00000426922 RAPGEF2Q9Y4G8 1499 aa18.5■□□□□ 0.55
LINC01517-201ENST00000426922 NUP160Q12769 1436 aa18.45■□□□□ 0.54
LINC01517-201ENST00000426922 PRXQ9BXM0 1461 aa18.45■□□□□ 0.54
LINC01517-201ENST00000426922 CEP170Q5SW79 1584 aa18.42■□□□□ 0.54
LINC01517-201ENST00000426922 CLASP1Q7Z460 1538 aa18.4■□□□□ 0.54
LINC01517-201ENST00000426922 KIAA0586Q9BVV6 1533 aa18.38■□□□□ 0.53
LINC01517-201ENST00000426922 JPH4Q96JJ6 628 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms