RNA–Protein interactions for RNA: ENST00000424738.1

ATRNL1-202, Transcript of attractin like 1, humanhuman

TSL 3

Gene ATRNL1, Length 768 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRNL1-202ENST00000424738 AEBP2Q6ZN18 517 aaPredicted RBP28.86■■■□□ 2.21
ATRNL1-202ENST00000424738 CHIC1Q5VXU3 224 aa27.87■■■□□ 2.05
ATRNL1-202ENST00000424738 NISCHQ9Y2I1 1504 aa25.35■■□□□ 1.65
ATRNL1-202ENST00000424738 SENP3Q9H4L4 574 aaPredicted RBP24.53■■□□□ 1.52
ATRNL1-202ENST00000424738 PHF23Q9BUL5 403 aaPredicted RBP24.49■■□□□ 1.51
ATRNL1-202ENST00000424738 ABCC9O60706 1549 aa23.76■■□□□ 1.39
ATRNL1-202ENST00000424738 CCDC180Q9P1Z9 1646 aa22.94■■□□□ 1.26
ATRNL1-202ENST00000424738 DNAJC5BQ9UF47 199 aa22.85■■□□□ 1.25
ATRNL1-202ENST00000424738 FOXD1Q16676 465 aa22.82■■□□□ 1.24
ATRNL1-202ENST00000424738 PLPPR3Q6T4P5 718 aa22.49■■□□□ 1.19
ATRNL1-202ENST00000424738 RB1CC1Q8TDY2 1594 aa22.24■■□□□ 1.15
ATRNL1-202ENST00000424738 PABPN1Q86U42 306 aaKnown RBP eCLIP22.06■■□□□ 1.12
ATRNL1-202ENST00000424738 NACADO15069 1562 aa21.91■■□□□ 1.1
ATRNL1-202ENST00000424738 DCAF8L2P0C7V8 631 aa21.89■■□□□ 1.09
ATRNL1-202ENST00000424738 PPP6R1Q9UPN7 881 aa21.72■■□□□ 1.07
ATRNL1-202ENST00000424738 ADRA2BP18089 450 aa21.69■■□□□ 1.06
ATRNL1-202ENST00000424738 BICRAQ9NZM4 1560 aa21.57■■□□□ 1.04
ATRNL1-202ENST00000424738 UNC13AQ9UPW8 1703 aa21.56■■□□□ 1.04
ATRNL1-202ENST00000424738 DNAJC5Q9H3Z4 198 aa21.47■■□□□ 1.03
ATRNL1-202ENST00000424738 CECR2Q9BXF3 1484 aa21.45■■□□□ 1.03
ATRNL1-202ENST00000424738 PIAS4Q8N2W9 510 aaPredicted RBP21.45■■□□□ 1.02
ATRNL1-202ENST00000424738 MYO15BQ96JP2 1530 aa21.35■■□□□ 1.01
ATRNL1-202ENST00000424738 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1.01
ATRNL1-202ENST00000424738 SHROOM4Q9ULL8 1493 aa21.23■□□□□ 0.99
ATRNL1-202ENST00000424738 MSH5O43196 834 aa21.16■□□□□ 0.98
ATRNL1-202ENST00000424738 EIF4G1Q04637 1599 aaKnown RBP21.14■□□□□ 0.97
ATRNL1-202ENST00000424738 SCRIBQ14160 1630 aa20.98■□□□□ 0.95
ATRNL1-202ENST00000424738 ZCCHC6Q5VYS8 1495 aaKnown RBP20.87■□□□□ 0.93
ATRNL1-202ENST00000424738 DCAF1Q9Y4B6 1507 aa20.84■□□□□ 0.93
ATRNL1-202ENST00000424738 CUX2O14529 1486 aa20.69■□□□□ 0.9
ATRNL1-202ENST00000424738 ERCC6Q03468 1493 aa20.6■□□□□ 0.89
ATRNL1-202ENST00000424738 TRIM41Q8WV44 630 aa20.37■□□□□ 0.85
ATRNL1-202ENST00000424738 NCAPD3P42695 1498 aa20.26■□□□□ 0.83
ATRNL1-202ENST00000424738 NESP48681 1621 aa20.18■□□□□ 0.82
ATRNL1-202ENST00000424738 ATAD2BQ9ULI0 1458 aa20.12■□□□□ 0.81
ATRNL1-202ENST00000424738 THOC2Q8NI27 1593 aaKnown RBP20.04■□□□□ 0.8
ATRNL1-202ENST00000424738 HMGXB3Q12766 1538 aa20.02■□□□□ 0.8
ATRNL1-202ENST00000424738 SMARCA2P51531 1590 aa20.02■□□□□ 0.8
ATRNL1-202ENST00000424738 BAZ1BQ9UIG0 1483 aaKnown RBP19.92■□□□□ 0.78
ATRNL1-202ENST00000424738 SMARCA4P51532 1647 aa19.89■□□□□ 0.77
ATRNL1-202ENST00000424738 LAMC3Q9Y6N6 1575 aa19.88■□□□□ 0.77
ATRNL1-202ENST00000424738 PDS5BQ9NTI5 1447 aa19.88■□□□□ 0.77
ATRNL1-202ENST00000424738 POTEDQ86YR6 584 aa19.84■□□□□ 0.77
ATRNL1-202ENST00000424738 SCAF1Q9H7N4 1312 aaKnown RBP19.81■□□□□ 0.76
ATRNL1-202ENST00000424738 KIF21AQ7Z4S6 1674 aa19.8■□□□□ 0.76
ATRNL1-202ENST00000424738 PPP4R3CPQ6ZMV5 832 aa19.78■□□□□ 0.76
ATRNL1-202ENST00000424738 MAPK8IP2Q13387 824 aaPredicted RBP19.77■□□□□ 0.76
ATRNL1-202ENST00000424738 MRC2Q9UBG0 1479 aa19.73■□□□□ 0.75
ATRNL1-202ENST00000424738 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
ATRNL1-202ENST00000424738 OSCARQ8IYS5 282 aa19.71■□□□□ 0.75
ATRNL1-202ENST00000424738 CADPSQ9ULU8 1353 aa19.66■□□□□ 0.74
ATRNL1-202ENST00000424738 PEG3Q9GZU2 1588 aa19.66■□□□□ 0.74
ATRNL1-202ENST00000424738 WDR62O43379 1518 aa19.64■□□□□ 0.73
ATRNL1-202ENST00000424738 MROH2BQ7Z745 1585 aa19.54■□□□□ 0.72
ATRNL1-202ENST00000424738 DMRT2Q9Y5R5 561 aa19.53■□□□□ 0.72
ATRNL1-202ENST00000424738 CEP164Q9UPV0 1460 aa19.53■□□□□ 0.72
ATRNL1-202ENST00000424738 FANCD2Q9BXW9 1451 aa19.44■□□□□ 0.7
ATRNL1-202ENST00000424738 RIMBP3CA6NJZ7 1639 aa19.43■□□□□ 0.7
ATRNL1-202ENST00000424738 RIMBP3BA6NNM3 1639 aa19.43■□□□□ 0.7
ATRNL1-202ENST00000424738 RIMBP3Q9UFD9 1639 aa19.43■□□□□ 0.7
ATRNL1-202ENST00000424738 TRHP20396 242 aaPredicted RBP19.38■□□□□ 0.69
ATRNL1-202ENST00000424738 ARHGEF11O15085 1522 aa19.34■□□□□ 0.69
ATRNL1-202ENST00000424738 CYB5RLQ6IPT4 315 aa19.33■□□□□ 0.68
ATRNL1-202ENST00000424738 CNKSR2Q8WXI2 1034 aa19.3■□□□□ 0.68
ATRNL1-202ENST00000424738 URB2Q14146 1524 aaKnown RBP19.29■□□□□ 0.68
ATRNL1-202ENST00000424738 CFTRP13569 1480 aa19.26■□□□□ 0.67
ATRNL1-202ENST00000424738 WIZO95785 1651 aa19.23■□□□□ 0.67
ATRNL1-202ENST00000424738 ZNF608Q9ULD9 1512 aaPredicted RBP19.18■□□□□ 0.66
ATRNL1-202ENST00000424738 NCBP3Q53F19 620 aaKnown RBP19.17■□□□□ 0.66
ATRNL1-202ENST00000424738 IFT140Q96RY7 1462 aa19.15■□□□□ 0.66
ATRNL1-202ENST00000424738 ARAP1Q96P48 1450 aa19.11■□□□□ 0.65
ATRNL1-202ENST00000424738 FBLN2P98095 1184 aa19.07■□□□□ 0.64
ATRNL1-202ENST00000424738 EIF4G3O43432 1585 aaKnown RBP19■□□□□ 0.63
ATRNL1-202ENST00000424738 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
ATRNL1-202ENST00000424738 HOXD11P31277 338 aaPredicted RBP18.99■□□□□ 0.63
ATRNL1-202ENST00000424738 RNF216Q9NWF9 866 aaPredicted RBP18.99■□□□□ 0.63
ATRNL1-202ENST00000424738 KCNA4P22459 653 aa18.98■□□□□ 0.63
ATRNL1-202ENST00000424738 TOP2AP11388 1531 aaKnown RBP18.98■□□□□ 0.63
ATRNL1-202ENST00000424738 TOPBP1Q92547 1522 aa18.97■□□□□ 0.63
ATRNL1-202ENST00000424738 AQRO60306 1485 aaKnown RBP eCLIP18.96■□□□□ 0.63
ATRNL1-202ENST00000424738 CHD1O14646 1710 aa18.92■□□□□ 0.62
ATRNL1-202ENST00000424738 NPM3O75607 178 aaKnown RBP18.9■□□□□ 0.62
ATRNL1-202ENST00000424738 ABCC8Q09428 1581 aa18.88■□□□□ 0.61
ATRNL1-202ENST00000424738 PRDM2Q13029 1718 aa18.84■□□□□ 0.61
ATRNL1-202ENST00000424738 DNMBPQ6XZF7 1577 aa18.82■□□□□ 0.6
ATRNL1-202ENST00000424738 CCDC88BA6NC98 1476 aa18.79■□□□□ 0.6
ATRNL1-202ENST00000424738 TARBP1Q13395 1621 aaKnown RBP18.78■□□□□ 0.6
ATRNL1-202ENST00000424738 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
ATRNL1-202ENST00000424738 TDRD9Q8NDG6 1382 aaKnown RBP18.76■□□□□ 0.59
ATRNL1-202ENST00000424738 DCAF8L1A6NGE4 600 aa18.75■□□□□ 0.59
ATRNL1-202ENST00000424738 POLA1P09884 1462 aaPredicted RBP18.74■□□□□ 0.59
ATRNL1-202ENST00000424738 CLASP1Q7Z460 1538 aa18.74■□□□□ 0.59
ATRNL1-202ENST00000424738 SNAPC4Q5SXM2 1469 aa18.73■□□□□ 0.59
ATRNL1-202ENST00000424738 RAD54L2Q9Y4B4 1467 aa18.71■□□□□ 0.59
ATRNL1-202ENST00000424738 SYNJ1O43426 1573 aa18.71■□□□□ 0.59
ATRNL1-202ENST00000424738 SOGA1O94964 1423 aa18.69■□□□□ 0.58
ATRNL1-202ENST00000424738 GAPVD1Q14C86 1478 aa18.66■□□□□ 0.58
ATRNL1-202ENST00000424738 MAGI1Q96QZ7 1491 aaPredicted RBP18.63■□□□□ 0.57
ATRNL1-202ENST00000424738 SYNJ2O15056 1496 aa18.58■□□□□ 0.57
ATRNL1-202ENST00000424738 GRIN2BQ13224 1484 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms