RNA–Protein interactions for RNA: ENST00000424351.1

RNF144A-AS1-202, RNF144A antisense RNA 1, humanhuman

TSL 2

Gene RNF144A-AS1, Length 2,954 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144A-AS1-202ENST00000424351 NISCHQ9Y2I1 1504 aa22.6■■□□□ 1.21
RNF144A-AS1-202ENST00000424351 CCDC180Q9P1Z9 1646 aa20.55■□□□□ 0.88
RNF144A-AS1-202ENST00000424351 ABCC9O60706 1549 aa19.35■□□□□ 0.69
RNF144A-AS1-202ENST00000424351 MYO15BQ96JP2 1530 aa19.32■□□□□ 0.68
RNF144A-AS1-202ENST00000424351 NACADO15069 1562 aa19.2■□□□□ 0.66
RNF144A-AS1-202ENST00000424351 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
RNF144A-AS1-202ENST00000424351 DCAF1Q9Y4B6 1507 aa19.12■□□□□ 0.65
RNF144A-AS1-202ENST00000424351 ZCCHC6Q5VYS8 1495 aaKnown RBP18.87■□□□□ 0.61
RNF144A-AS1-202ENST00000424351 SHROOM4Q9ULL8 1493 aa18.83■□□□□ 0.6
RNF144A-AS1-202ENST00000424351 UNC13AQ9UPW8 1703 aa18.58■□□□□ 0.56
RNF144A-AS1-202ENST00000424351 SUPT5HO00267 1087 aaKnown RBP18.38■□□□□ 0.53
RNF144A-AS1-202ENST00000424351 BICRAQ9NZM4 1560 aa18.38■□□□□ 0.53
RNF144A-AS1-202ENST00000424351 SCRIBQ14160 1630 aa18.09■□□□□ 0.49
RNF144A-AS1-202ENST00000424351 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
RNF144A-AS1-202ENST00000424351 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
RNF144A-AS1-202ENST00000424351 EIF4G1Q04637 1599 aaKnown RBP17.9■□□□□ 0.46
RNF144A-AS1-202ENST00000424351 CC2D2AQ9P2K1 1620 aa17.78■□□□□ 0.44
RNF144A-AS1-202ENST00000424351 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
RNF144A-AS1-202ENST00000424351 CHIC1Q5VXU3 224 aa17.69■□□□□ 0.42
RNF144A-AS1-202ENST00000424351 PCGF6Q9BYE7 350 aa17.69■□□□□ 0.42
RNF144A-AS1-202ENST00000424351 PEG3Q9GZU2 1588 aa17.67■□□□□ 0.42
RNF144A-AS1-202ENST00000424351 CECR2Q9BXF3 1484 aa17.66■□□□□ 0.42
RNF144A-AS1-202ENST00000424351 BAZ1AQ9NRL2 1556 aaPredicted RBP17.63■□□□□ 0.41
RNF144A-AS1-202ENST00000424351 HMGXB3Q12766 1538 aa17.62■□□□□ 0.41
RNF144A-AS1-202ENST00000424351 PPARGC1BQ86YN6 1023 aaKnown RBP17.62■□□□□ 0.41
RNF144A-AS1-202ENST00000424351 SMARCA2P51531 1590 aa17.62■□□□□ 0.41
RNF144A-AS1-202ENST00000424351 HRCP23327 699 aa17.58■□□□□ 0.41
RNF144A-AS1-202ENST00000424351 SMARCA4P51532 1647 aa17.58■□□□□ 0.41
RNF144A-AS1-202ENST00000424351 NCAPD3P42695 1498 aa17.57■□□□□ 0.4
RNF144A-AS1-202ENST00000424351 LOC105371045A0A1W2PR82 267 aa17.48■□□□□ 0.39
RNF144A-AS1-202ENST00000424351 ATAD2BQ9ULI0 1458 aa17.41■□□□□ 0.38
RNF144A-AS1-202ENST00000424351 CUX2O14529 1486 aa17.28■□□□□ 0.36
RNF144A-AS1-202ENST00000424351 EHMT2Q96KQ7 1210 aa17.26■□□□□ 0.35
RNF144A-AS1-202ENST00000424351 BAZ1BQ9UIG0 1483 aaKnown RBP17.25■□□□□ 0.35
RNF144A-AS1-202ENST00000424351 LAMC3Q9Y6N6 1575 aa17.22■□□□□ 0.35
RNF144A-AS1-202ENST00000424351 MROH2BQ7Z745 1585 aa17.19■□□□□ 0.34
RNF144A-AS1-202ENST00000424351 TOP2AP11388 1531 aaKnown RBP17.11■□□□□ 0.33
RNF144A-AS1-202ENST00000424351 FAM9AQ8IZU1 332 aaPredicted RBP17.11■□□□□ 0.33
RNF144A-AS1-202ENST00000424351 PRDM2Q13029 1718 aa17.08■□□□□ 0.32
RNF144A-AS1-202ENST00000424351 WIZO95785 1651 aa17■□□□□ 0.31
RNF144A-AS1-202ENST00000424351 RSF1Q96T23 1441 aaPredicted RBP17■□□□□ 0.31
RNF144A-AS1-202ENST00000424351 PDS5BQ9NTI5 1447 aa16.95■□□□□ 0.3
RNF144A-AS1-202ENST00000424351 TRIM26Q12899 539 aaPredicted RBP16.94■□□□□ 0.3
RNF144A-AS1-202ENST00000424351 THOC2Q8NI27 1593 aaKnown RBP16.9■□□□□ 0.3
RNF144A-AS1-202ENST00000424351 CADPSQ9ULU8 1353 aa16.89■□□□□ 0.29
RNF144A-AS1-202ENST00000424351 CFTRP13569 1480 aa16.86■□□□□ 0.29
RNF144A-AS1-202ENST00000424351 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
RNF144A-AS1-202ENST00000424351 TRIM41Q8WV44 630 aa16.85■□□□□ 0.29
RNF144A-AS1-202ENST00000424351 DNAJC5Q9H3Z4 198 aa16.82■□□□□ 0.28
RNF144A-AS1-202ENST00000424351 WDR62O43379 1518 aa16.81■□□□□ 0.28
RNF144A-AS1-202ENST00000424351 KIF21AQ7Z4S6 1674 aa16.79■□□□□ 0.28
RNF144A-AS1-202ENST00000424351 MRC2Q9UBG0 1479 aa16.77■□□□□ 0.28
RNF144A-AS1-202ENST00000424351 ABCC8Q09428 1581 aa16.76■□□□□ 0.27
RNF144A-AS1-202ENST00000424351 CEP164Q9UPV0 1460 aa16.72■□□□□ 0.27
RNF144A-AS1-202ENST00000424351 TTBK1Q5TCY1 1321 aaPredicted RBP16.71■□□□□ 0.27
RNF144A-AS1-202ENST00000424351 WDR97A6NE52 1622 aa16.71■□□□□ 0.27
RNF144A-AS1-202ENST00000424351 NESP48681 1621 aa16.68■□□□□ 0.26
RNF144A-AS1-202ENST00000424351 FANCD2Q9BXW9 1451 aa16.65■□□□□ 0.26
RNF144A-AS1-202ENST00000424351 CCDC88BA6NC98 1476 aa16.65■□□□□ 0.26
RNF144A-AS1-202ENST00000424351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.56■□□□□ 0.24
RNF144A-AS1-202ENST00000424351 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
RNF144A-AS1-202ENST00000424351 DNMBPQ6XZF7 1577 aa16.56■□□□□ 0.24
RNF144A-AS1-202ENST00000424351 IFT140Q96RY7 1462 aa16.49■□□□□ 0.23
RNF144A-AS1-202ENST00000424351 ZEB1P37275 1124 aaPredicted RBP16.49■□□□□ 0.23
RNF144A-AS1-202ENST00000424351 URB2Q14146 1524 aaKnown RBP16.46■□□□□ 0.23
RNF144A-AS1-202ENST00000424351 TOPBP1Q92547 1522 aa16.42■□□□□ 0.22
RNF144A-AS1-202ENST00000424351 CCER1Q8TC90 406 aaPredicted RBP16.41■□□□□ 0.22
RNF144A-AS1-202ENST00000424351 TARBP1Q13395 1621 aaKnown RBP16.35■□□□□ 0.21
RNF144A-AS1-202ENST00000424351 BIVM-ERCC5R4GMW8 1640 aa16.35■□□□□ 0.21
RNF144A-AS1-202ENST00000424351 NEUROD1Q13562 356 aa16.28■□□□□ 0.2
RNF144A-AS1-202ENST00000424351 TOP2BQ02880 1626 aa16.24■□□□□ 0.19
RNF144A-AS1-202ENST00000424351 EIF4G3O43432 1585 aaKnown RBP16.23■□□□□ 0.19
RNF144A-AS1-202ENST00000424351 POLA1P09884 1462 aaPredicted RBP16.22■□□□□ 0.19
RNF144A-AS1-202ENST00000424351 CUX1P39880 1505 aa16.2■□□□□ 0.18
RNF144A-AS1-202ENST00000424351 ABCA10Q8WWZ4 1543 aa16.19■□□□□ 0.18
RNF144A-AS1-202ENST00000424351 MAGI1Q96QZ7 1491 aaPredicted RBP16.18■□□□□ 0.18
RNF144A-AS1-202ENST00000424351 DIEXFQ68CQ4 756 aaKnown RBP16.17■□□□□ 0.18
RNF144A-AS1-202ENST00000424351 ABCA5Q8WWZ7 1642 aa16.17■□□□□ 0.18
RNF144A-AS1-202ENST00000424351 YTHDC1Q96MU7 727 aaKnown RBP16.16■□□□□ 0.18
RNF144A-AS1-202ENST00000424351 ACIN1Q9UKV3 1341 aaKnown RBP16.15■□□□□ 0.18
RNF144A-AS1-202ENST00000424351 FGD5Q6ZNL6 1462 aa16.14■□□□□ 0.18
RNF144A-AS1-202ENST00000424351 GTF3C3Q9Y5Q9 886 aa16.14■□□□□ 0.17
RNF144A-AS1-202ENST00000424351 PBRM1Q86U86 1689 aa16.14■□□□□ 0.17
RNF144A-AS1-202ENST00000424351 RANGAP1P46060 587 aaPredicted RBP16.13■□□□□ 0.17
RNF144A-AS1-202ENST00000424351 UBTFP17480 764 aaKnown RBP16.11■□□□□ 0.17
RNF144A-AS1-202ENST00000424351 PELP1Q8IZL8 1130 aaKnown RBP16.11■□□□□ 0.17
RNF144A-AS1-202ENST00000424351 SOGA1O94964 1423 aa16.11■□□□□ 0.17
RNF144A-AS1-202ENST00000424351 GRIN2BQ13224 1484 aa16.1■□□□□ 0.17
RNF144A-AS1-202ENST00000424351 ERICH3Q5RHP9 1530 aa16.08■□□□□ 0.17
RNF144A-AS1-202ENST00000424351 OSCARQ8IYS5 282 aa16.08■□□□□ 0.16
RNF144A-AS1-202ENST00000424351 WRNQ14191 1432 aaPredicted RBP eCLIP16.08■□□□□ 0.16
RNF144A-AS1-202ENST00000424351 HNRNPUL2Q1KMD3 747 aaKnown RBP16.05■□□□□ 0.16
RNF144A-AS1-202ENST00000424351 SYNJ1O43426 1573 aa16.04■□□□□ 0.16
RNF144A-AS1-202ENST00000424351 CHD1O14646 1710 aa16.03■□□□□ 0.16
RNF144A-AS1-202ENST00000424351 RUSC2Q8N2Y8 1516 aa16.02■□□□□ 0.16
RNF144A-AS1-202ENST00000424351 ZNF608Q9ULD9 1512 aaPredicted RBP16.02■□□□□ 0.15
RNF144A-AS1-202ENST00000424351 SYNJ2O15056 1496 aa16.02■□□□□ 0.15
RNF144A-AS1-202ENST00000424351 CEP162Q5TB80 1403 aa16.01■□□□□ 0.15
RNF144A-AS1-202ENST00000424351 CLASP1Q7Z460 1538 aa16■□□□□ 0.15
RNF144A-AS1-202ENST00000424351 CUL7Q14999 1698 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms