RNA–Protein interactions for RNA: ENST00000423917.5

FAM238B-202, Transcript of family with sequence similarity 238 member B, humanhuman

TSL 5 BASIC

Gene FAM238B, Length 1,220 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238B-202ENST00000423917 NISCHQ9Y2I1 1504 aa28.24■■■□□ 2.11
FAM238B-202ENST00000423917 CCDC180Q9P1Z9 1646 aa25.02■■□□□ 1.6
FAM238B-202ENST00000423917 ABCC9O60706 1549 aa24.25■■□□□ 1.47
FAM238B-202ENST00000423917 ZCCHC6Q5VYS8 1495 aaKnown RBP23.61■■□□□ 1.37
FAM238B-202ENST00000423917 DCAF8L2P0C7V8 631 aa23.6■■□□□ 1.37
FAM238B-202ENST00000423917 NACADO15069 1562 aa23.43■■□□□ 1.34
FAM238B-202ENST00000423917 RB1CC1Q8TDY2 1594 aa23.43■■□□□ 1.34
FAM238B-202ENST00000423917 DCAF1Q9Y4B6 1507 aa23.33■■□□□ 1.33
FAM238B-202ENST00000423917 MYO15BQ96JP2 1530 aa23.31■■□□□ 1.32
FAM238B-202ENST00000423917 SCRIBQ14160 1630 aa22.93■■□□□ 1.26
FAM238B-202ENST00000423917 UNC13AQ9UPW8 1703 aa22.88■■□□□ 1.25
FAM238B-202ENST00000423917 PABPN1Q86U42 306 aaKnown RBP eCLIP22.69■■□□□ 1.22
FAM238B-202ENST00000423917 BICRAQ9NZM4 1560 aa22.64■■□□□ 1.22
FAM238B-202ENST00000423917 SHROOM4Q9ULL8 1493 aa22.62■■□□□ 1.21
FAM238B-202ENST00000423917 EIF4G1Q04637 1599 aaKnown RBP22.08■■□□□ 1.12
FAM238B-202ENST00000423917 CECR2Q9BXF3 1484 aa21.97■■□□□ 1.11
FAM238B-202ENST00000423917 CC2D2AQ9P2K1 1620 aa21.92■■□□□ 1.1
FAM238B-202ENST00000423917 BAZ1AQ9NRL2 1556 aaPredicted RBP21.91■■□□□ 1.1
FAM238B-202ENST00000423917 SMARCA4P51532 1647 aa21.9■■□□□ 1.1
FAM238B-202ENST00000423917 DNAJC5BQ9UF47 199 aa21.86■■□□□ 1.09
FAM238B-202ENST00000423917 MROH2BQ7Z745 1585 aa21.79■■□□□ 1.08
FAM238B-202ENST00000423917 SMARCA2P51531 1590 aa21.7■■□□□ 1.06
FAM238B-202ENST00000423917 ATAD2BQ9ULI0 1458 aa21.66■■□□□ 1.06
FAM238B-202ENST00000423917 RSF1Q96T23 1441 aaPredicted RBP21.62■■□□□ 1.05
FAM238B-202ENST00000423917 PEG3Q9GZU2 1588 aa21.6■■□□□ 1.05
FAM238B-202ENST00000423917 WIZO95785 1651 aa21.6■■□□□ 1.05
FAM238B-202ENST00000423917 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.04
FAM238B-202ENST00000423917 NCAPD3P42695 1498 aa21.57■■□□□ 1.04
FAM238B-202ENST00000423917 HMGXB3Q12766 1538 aa21.55■■□□□ 1.04
FAM238B-202ENST00000423917 SUPT5HO00267 1087 aaKnown RBP21.4■■□□□ 1.02
FAM238B-202ENST00000423917 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.01
FAM238B-202ENST00000423917 CCDC88BA6NC98 1476 aa21.1■□□□□ 0.97
FAM238B-202ENST00000423917 NESP48681 1621 aa21.04■□□□□ 0.96
FAM238B-202ENST00000423917 LAMC3Q9Y6N6 1575 aa21.02■□□□□ 0.95
FAM238B-202ENST00000423917 CADPSQ9ULU8 1353 aa20.98■□□□□ 0.95
FAM238B-202ENST00000423917 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
FAM238B-202ENST00000423917 CFTRP13569 1480 aa20.92■□□□□ 0.94
FAM238B-202ENST00000423917 PDS5BQ9NTI5 1447 aa20.87■□□□□ 0.93
FAM238B-202ENST00000423917 PRDM2Q13029 1718 aa20.86■□□□□ 0.93
FAM238B-202ENST00000423917 KIF21AQ7Z4S6 1674 aa20.83■□□□□ 0.92
FAM238B-202ENST00000423917 FANCD2Q9BXW9 1451 aa20.8■□□□□ 0.92
FAM238B-202ENST00000423917 CEP164Q9UPV0 1460 aa20.77■□□□□ 0.92
FAM238B-202ENST00000423917 MRC2Q9UBG0 1479 aa20.67■□□□□ 0.9
FAM238B-202ENST00000423917 THOC2Q8NI27 1593 aaKnown RBP20.66■□□□□ 0.9
FAM238B-202ENST00000423917 WDR62O43379 1518 aa20.56■□□□□ 0.88
FAM238B-202ENST00000423917 URB2Q14146 1524 aaKnown RBP20.56■□□□□ 0.88
FAM238B-202ENST00000423917 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
FAM238B-202ENST00000423917 CUX2O14529 1486 aa20.5■□□□□ 0.87
FAM238B-202ENST00000423917 TOPBP1Q92547 1522 aa20.49■□□□□ 0.87
FAM238B-202ENST00000423917 ABCC8Q09428 1581 aa20.48■□□□□ 0.87
FAM238B-202ENST00000423917 CUX1P39880 1505 aa20.44■□□□□ 0.86
FAM238B-202ENST00000423917 WRNQ14191 1432 aaPredicted RBP eCLIP20.43■□□□□ 0.86
FAM238B-202ENST00000423917 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
FAM238B-202ENST00000423917 FGD5Q6ZNL6 1462 aa20.35■□□□□ 0.85
FAM238B-202ENST00000423917 TOP2BQ02880 1626 aa20.34■□□□□ 0.85
FAM238B-202ENST00000423917 BIVM-ERCC5R4GMW8 1640 aa20.34■□□□□ 0.85
FAM238B-202ENST00000423917 POLA1P09884 1462 aaPredicted RBP20.33■□□□□ 0.85
FAM238B-202ENST00000423917 IFT140Q96RY7 1462 aa20.29■□□□□ 0.84
FAM238B-202ENST00000423917 RAD54L2Q9Y4B4 1467 aa20.25■□□□□ 0.83
FAM238B-202ENST00000423917 SOGA1O94964 1423 aa20.25■□□□□ 0.83
FAM238B-202ENST00000423917 TARBP1Q13395 1621 aaKnown RBP20.22■□□□□ 0.83
FAM238B-202ENST00000423917 ZNF608Q9ULD9 1512 aaPredicted RBP20.17■□□□□ 0.82
FAM238B-202ENST00000423917 TRIM41Q8WV44 630 aa20.17■□□□□ 0.82
FAM238B-202ENST00000423917 EIF4G3O43432 1585 aaKnown RBP20.16■□□□□ 0.82
FAM238B-202ENST00000423917 WDR97A6NE52 1622 aa20.15■□□□□ 0.82
FAM238B-202ENST00000423917 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
FAM238B-202ENST00000423917 TDRD9Q8NDG6 1382 aaKnown RBP20.11■□□□□ 0.81
FAM238B-202ENST00000423917 AQRO60306 1485 aaKnown RBP eCLIP20.1■□□□□ 0.81
FAM238B-202ENST00000423917 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
FAM238B-202ENST00000423917 CHIC1Q5VXU3 224 aa20.04■□□□□ 0.8
FAM238B-202ENST00000423917 GAPVD1Q14C86 1478 aa20.04■□□□□ 0.8
FAM238B-202ENST00000423917 PBRM1Q86U86 1689 aa20.02■□□□□ 0.8
FAM238B-202ENST00000423917 GRIN2BQ13224 1484 aa19.99■□□□□ 0.79
FAM238B-202ENST00000423917 KIF27Q86VH2 1401 aa19.99■□□□□ 0.79
FAM238B-202ENST00000423917 SNAPC4Q5SXM2 1469 aa19.97■□□□□ 0.79
FAM238B-202ENST00000423917 MAGI1Q96QZ7 1491 aaPredicted RBP19.91■□□□□ 0.78
FAM238B-202ENST00000423917 ERICH3Q5RHP9 1530 aa19.9■□□□□ 0.78
FAM238B-202ENST00000423917 FBLN2P98095 1184 aa19.88■□□□□ 0.77
FAM238B-202ENST00000423917 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
FAM238B-202ENST00000423917 RUSC2Q8N2Y8 1516 aa19.86■□□□□ 0.77
FAM238B-202ENST00000423917 CHD1O14646 1710 aa19.85■□□□□ 0.77
FAM238B-202ENST00000423917 CUL7Q14999 1698 aa19.82■□□□□ 0.76
FAM238B-202ENST00000423917 SYNJ2O15056 1496 aa19.82■□□□□ 0.76
FAM238B-202ENST00000423917 CHMP7Q8WUX9 453 aaPredicted RBP19.82■□□□□ 0.76
FAM238B-202ENST00000423917 FHAD1B1AJZ9 1412 aa19.8■□□□□ 0.76
FAM238B-202ENST00000423917 FAM9AQ8IZU1 332 aaPredicted RBP19.8■□□□□ 0.76
FAM238B-202ENST00000423917 IGF1RP08069 1367 aa19.79■□□□□ 0.76
FAM238B-202ENST00000423917 EEA1Q15075 1411 aa19.77■□□□□ 0.76
FAM238B-202ENST00000423917 GRIN2AQ12879 1464 aa19.73■□□□□ 0.75
FAM238B-202ENST00000423917 CARMIL1Q5VZK9 1371 aa19.73■□□□□ 0.75
FAM238B-202ENST00000423917 OSCARQ8IYS5 282 aa19.69■□□□□ 0.74
FAM238B-202ENST00000423917 CSRNP3Q8WYN3 585 aa19.68■□□□□ 0.74
FAM238B-202ENST00000423917 RAPGEF2Q9Y4G8 1499 aa19.66■□□□□ 0.74
FAM238B-202ENST00000423917 CEP170Q5SW79 1584 aa19.63■□□□□ 0.73
FAM238B-202ENST00000423917 PRXQ9BXM0 1461 aa19.62■□□□□ 0.73
FAM238B-202ENST00000423917 NUP160Q12769 1436 aa19.59■□□□□ 0.73
FAM238B-202ENST00000423917 EHMT2Q96KQ7 1210 aa19.59■□□□□ 0.73
FAM238B-202ENST00000423917 CLASP1Q7Z460 1538 aa19.57■□□□□ 0.72
FAM238B-202ENST00000423917 KIF21BO75037 1637 aa19.57■□□□□ 0.72
FAM238B-202ENST00000423917 DNAJC5Q9H3Z4 198 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms