RNA–Protein interactions for RNA: ENST00000422857.1

CYCSP52-201, Transcript of cytochrome c, somatic pseudogene 52, humanhuman

BASIC

Gene CYCSP52, Length 310 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP52-201ENST00000422857 NISCHQ9Y2I1 1504 aa15.09■□□□□ 0.01
CYCSP52-201ENST00000422857 AEBP2Q6ZN18 517 aaPredicted RBP13.27□□□□□ -0.29
CYCSP52-201ENST00000422857 CCDC180Q9P1Z9 1646 aa13.24□□□□□ -0.29
CYCSP52-201ENST00000422857 CHIC1Q5VXU3 224 aa12.79□□□□□ -0.36
CYCSP52-201ENST00000422857 ZCCHC6Q5VYS8 1495 aaKnown RBP12.71□□□□□ -0.38
CYCSP52-201ENST00000422857 DCAF1Q9Y4B6 1507 aa12.67□□□□□ -0.38
CYCSP52-201ENST00000422857 MYO15BQ96JP2 1530 aa12.57□□□□□ -0.4
CYCSP52-201ENST00000422857 NACADO15069 1562 aa12.32□□□□□ -0.44
CYCSP52-201ENST00000422857 ABCC9O60706 1549 aa12.23□□□□□ -0.45
CYCSP52-201ENST00000422857 RB1CC1Q8TDY2 1594 aa12.14□□□□□ -0.47
CYCSP52-201ENST00000422857 DCAF8L2P0C7V8 631 aa12.04□□□□□ -0.48
CYCSP52-201ENST00000422857 SHROOM4Q9ULL8 1493 aa11.9□□□□□ -0.5
CYCSP52-201ENST00000422857 SCRIBQ14160 1630 aa11.9□□□□□ -0.5
CYCSP52-201ENST00000422857 UNC13AQ9UPW8 1703 aa11.83□□□□□ -0.52
CYCSP52-201ENST00000422857 BICRAQ9NZM4 1560 aa11.79□□□□□ -0.52
CYCSP52-201ENST00000422857 RSF1Q96T23 1441 aaPredicted RBP11.67□□□□□ -0.54
CYCSP52-201ENST00000422857 BAZ1AQ9NRL2 1556 aaPredicted RBP11.66□□□□□ -0.54
CYCSP52-201ENST00000422857 CECR2Q9BXF3 1484 aa11.61□□□□□ -0.55
CYCSP52-201ENST00000422857 PEG3Q9GZU2 1588 aa11.59□□□□□ -0.55
CYCSP52-201ENST00000422857 MROH2BQ7Z745 1585 aa11.58□□□□□ -0.56
CYCSP52-201ENST00000422857 SMARCA4P51532 1647 aa11.57□□□□□ -0.56
CYCSP52-201ENST00000422857 SENP3Q9H4L4 574 aaPredicted RBP11.54□□□□□ -0.56
CYCSP52-201ENST00000422857 SUPT5HO00267 1087 aaKnown RBP11.49□□□□□ -0.57
CYCSP52-201ENST00000422857 PABPN1Q86U42 306 aaKnown RBP eCLIP11.46□□□□□ -0.57
CYCSP52-201ENST00000422857 SMARCA2P51531 1590 aa11.43□□□□□ -0.58
CYCSP52-201ENST00000422857 TOP2AP11388 1531 aaKnown RBP11.43□□□□□ -0.58
CYCSP52-201ENST00000422857 WIZO95785 1651 aa11.42□□□□□ -0.58
CYCSP52-201ENST00000422857 ATAD2BQ9ULI0 1458 aa11.4□□□□□ -0.58
CYCSP52-201ENST00000422857 NCAPD3P42695 1498 aa11.39□□□□□ -0.59
CYCSP52-201ENST00000422857 EIF4G1Q04637 1599 aaKnown RBP11.39□□□□□ -0.59
CYCSP52-201ENST00000422857 HMGXB3Q12766 1538 aa11.37□□□□□ -0.59
CYCSP52-201ENST00000422857 PHF23Q9BUL5 403 aaPredicted RBP11.3□□□□□ -0.6
CYCSP52-201ENST00000422857 BAZ1BQ9UIG0 1483 aaKnown RBP11.26□□□□□ -0.61
CYCSP52-201ENST00000422857 CCDC88BA6NC98 1476 aa11.25□□□□□ -0.61
CYCSP52-201ENST00000422857 CC2D2AQ9P2K1 1620 aa11.17□□□□□ -0.62
CYCSP52-201ENST00000422857 CFTRP13569 1480 aa11.1□□□□□ -0.63
CYCSP52-201ENST00000422857 CADPSQ9ULU8 1353 aa11.02□□□□□ -0.65
CYCSP52-201ENST00000422857 PRDM2Q13029 1718 aa11.01□□□□□ -0.65
CYCSP52-201ENST00000422857 LAMC3Q9Y6N6 1575 aa10.95□□□□□ -0.66
CYCSP52-201ENST00000422857 WRNQ14191 1432 aaPredicted RBP eCLIP10.95□□□□□ -0.66
CYCSP52-201ENST00000422857 TRIM41Q8WV44 630 aa10.93□□□□□ -0.66
CYCSP52-201ENST00000422857 TOP2BQ02880 1626 aa10.92□□□□□ -0.66
CYCSP52-201ENST00000422857 EEA1Q15075 1411 aa10.92□□□□□ -0.66
CYCSP52-201ENST00000422857 BIVM-ERCC5R4GMW8 1640 aa10.91□□□□□ -0.66
CYCSP52-201ENST00000422857 ABCC8Q09428 1581 aa10.89□□□□□ -0.67
CYCSP52-201ENST00000422857 SYNJ1O43426 1573 aa10.86□□□□□ -0.67
CYCSP52-201ENST00000422857 CUX1P39880 1505 aa10.84□□□□□ -0.67
CYCSP52-201ENST00000422857 FANCD2Q9BXW9 1451 aa10.83□□□□□ -0.68
CYCSP52-201ENST00000422857 PDS5BQ9NTI5 1447 aa10.83□□□□□ -0.68
CYCSP52-201ENST00000422857 DNAJC5BQ9UF47 199 aa10.81□□□□□ -0.68
CYCSP52-201ENST00000422857 DNMBPQ6XZF7 1577 aa10.78□□□□□ -0.68
CYCSP52-201ENST00000422857 CEP164Q9UPV0 1460 aa10.76□□□□□ -0.69
CYCSP52-201ENST00000422857 NESP48681 1621 aa10.76□□□□□ -0.69
CYCSP52-201ENST00000422857 TOPBP1Q92547 1522 aa10.74□□□□□ -0.69
CYCSP52-201ENST00000422857 SOGA1O94964 1423 aa10.73□□□□□ -0.69
CYCSP52-201ENST00000422857 KIF21BO75037 1637 aa10.71□□□□□ -0.69
CYCSP52-201ENST00000422857 ABCA10Q8WWZ4 1543 aa10.71□□□□□ -0.69
CYCSP52-201ENST00000422857 CSRNP3Q8WYN3 585 aa10.71□□□□□ -0.69
CYCSP52-201ENST00000422857 URB2Q14146 1524 aaKnown RBP10.7□□□□□ -0.7
CYCSP52-201ENST00000422857 PRXQ9BXM0 1461 aa10.69□□□□□ -0.7
CYCSP52-201ENST00000422857 KIF27Q86VH2 1401 aa10.69□□□□□ -0.7
CYCSP52-201ENST00000422857 ERICH3Q5RHP9 1530 aa10.68□□□□□ -0.7
CYCSP52-201ENST00000422857 POLA1P09884 1462 aaPredicted RBP10.68□□□□□ -0.7
CYCSP52-201ENST00000422857 FGD5Q6ZNL6 1462 aa10.68□□□□□ -0.7
CYCSP52-201ENST00000422857 WDR97A6NE52 1622 aa10.67□□□□□ -0.7
CYCSP52-201ENST00000422857 POTEDQ86YR6 584 aa10.67□□□□□ -0.7
CYCSP52-201ENST00000422857 MRC2Q9UBG0 1479 aa10.67□□□□□ -0.7
CYCSP52-201ENST00000422857 KIF21AQ7Z4S6 1674 aa10.66□□□□□ -0.7
CYCSP52-201ENST00000422857 TNIKQ9UKE5 1360 aa10.66□□□□□ -0.7
CYCSP52-201ENST00000422857 WDR62O43379 1518 aa10.66□□□□□ -0.7
CYCSP52-201ENST00000422857 RUSC2Q8N2Y8 1516 aa10.66□□□□□ -0.7
CYCSP52-201ENST00000422857 GOLGA3Q08378 1498 aa10.63□□□□□ -0.71
CYCSP52-201ENST00000422857 IGF1RP08069 1367 aa10.62□□□□□ -0.71
CYCSP52-201ENST00000422857 TARBP1Q13395 1621 aaKnown RBP10.62□□□□□ -0.71
CYCSP52-201ENST00000422857 LOC105371045A0A1W2PR82 267 aa10.6□□□□□ -0.71
CYCSP52-201ENST00000422857 FOXD1Q16676 465 aa10.6□□□□□ -0.71
CYCSP52-201ENST00000422857 ABCA5Q8WWZ7 1642 aa10.59□□□□□ -0.71
CYCSP52-201ENST00000422857 CUX2O14529 1486 aa10.59□□□□□ -0.71
CYCSP52-201ENST00000422857 THOC2Q8NI27 1593 aaKnown RBP10.59□□□□□ -0.71
CYCSP52-201ENST00000422857 IFT140Q96RY7 1462 aa10.57□□□□□ -0.72
CYCSP52-201ENST00000422857 CUL7Q14999 1698 aa10.55□□□□□ -0.72
CYCSP52-201ENST00000422857 RAD54L2Q9Y4B4 1467 aa10.55□□□□□ -0.72
CYCSP52-201ENST00000422857 RAPGEF2Q9Y4G8 1499 aa10.55□□□□□ -0.72
CYCSP52-201ENST00000422857 FAM9AQ8IZU1 332 aaPredicted RBP10.52□□□□□ -0.73
CYCSP52-201ENST00000422857 CARMIL1Q5VZK9 1371 aa10.52□□□□□ -0.73
CYCSP52-201ENST00000422857 GAPVD1Q14C86 1478 aa10.51□□□□□ -0.73
CYCSP52-201ENST00000422857 CEP162Q5TB80 1403 aa10.5□□□□□ -0.73
CYCSP52-201ENST00000422857 ERCC6Q03468 1493 aa10.49□□□□□ -0.73
CYCSP52-201ENST00000422857 GRIN2BQ13224 1484 aa10.47□□□□□ -0.73
CYCSP52-201ENST00000422857 FHAD1B1AJZ9 1412 aa10.45□□□□□ -0.74
CYCSP52-201ENST00000422857 TDRD9Q8NDG6 1382 aaKnown RBP10.43□□□□□ -0.74
CYCSP52-201ENST00000422857 MAGI1Q96QZ7 1491 aaPredicted RBP10.42□□□□□ -0.74
CYCSP52-201ENST00000422857 CLIP1P30622 1438 aa10.42□□□□□ -0.74
CYCSP52-201ENST00000422857 ADAMTS12P58397 1594 aa10.42□□□□□ -0.74
CYCSP52-201ENST00000422857 PBRM1Q86U86 1689 aa10.41□□□□□ -0.74
CYCSP52-201ENST00000422857 UBTFP17480 764 aaKnown RBP10.4□□□□□ -0.74
CYCSP52-201ENST00000422857 EFCAB5A4FU69 1503 aa10.39□□□□□ -0.75
CYCSP52-201ENST00000422857 ZNF608Q9ULD9 1512 aaPredicted RBP10.39□□□□□ -0.75
CYCSP52-201ENST00000422857 VPS8Q8N3P4 1428 aa10.39□□□□□ -0.75
CYCSP52-201ENST00000422857 EIF4G3O43432 1585 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 693.7 ms