RNA–Protein interactions for RNA: ENST00000421058.1

PUDPP1-201, Transcript of pseudouridine 5'-phosphatase pseudogene 1, humanhuman

BASIC

Gene PUDPP1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPP1-201ENST00000421058 NISCHQ9Y2I1 1504 aa19.55■□□□□ 0.72
PUDPP1-201ENST00000421058 CCDC180Q9P1Z9 1646 aa17.29■□□□□ 0.36
PUDPP1-201ENST00000421058 ABCC9O60706 1549 aa16.77■□□□□ 0.28
PUDPP1-201ENST00000421058 DCAF8L2P0C7V8 631 aa16.48■□□□□ 0.23
PUDPP1-201ENST00000421058 ZCCHC6Q5VYS8 1495 aaKnown RBP16.29■□□□□ 0.2
PUDPP1-201ENST00000421058 NACADO15069 1562 aa16.27■□□□□ 0.2
PUDPP1-201ENST00000421058 RB1CC1Q8TDY2 1594 aa16.26■□□□□ 0.19
PUDPP1-201ENST00000421058 MYO15BQ96JP2 1530 aa16.2■□□□□ 0.18
PUDPP1-201ENST00000421058 DCAF1Q9Y4B6 1507 aa16.19■□□□□ 0.18
PUDPP1-201ENST00000421058 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
PUDPP1-201ENST00000421058 PABPN1Q86U42 306 aaKnown RBP eCLIP15.74■□□□□ 0.11
PUDPP1-201ENST00000421058 UNC13AQ9UPW8 1703 aa15.72■□□□□ 0.11
PUDPP1-201ENST00000421058 BICRAQ9NZM4 1560 aa15.6■□□□□ 0.09
PUDPP1-201ENST00000421058 SHROOM4Q9ULL8 1493 aa15.59■□□□□ 0.09
PUDPP1-201ENST00000421058 EIF4G1Q04637 1599 aaKnown RBP15.26■□□□□ 0.03
PUDPP1-201ENST00000421058 BAZ1AQ9NRL2 1556 aaPredicted RBP15.18■□□□□ 0.02
PUDPP1-201ENST00000421058 CECR2Q9BXF3 1484 aa15.15■□□□□ 0.02
PUDPP1-201ENST00000421058 CC2D2AQ9P2K1 1620 aa15.15■□□□□ 0.02
PUDPP1-201ENST00000421058 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
PUDPP1-201ENST00000421058 SMARCA4P51532 1647 aa15.1■□□□□ 0.01
PUDPP1-201ENST00000421058 SMARCA2P51531 1590 aa15.05■□□□□ -0
PUDPP1-201ENST00000421058 MROH2BQ7Z745 1585 aa15.02□□□□□ -0.01
PUDPP1-201ENST00000421058 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
PUDPP1-201ENST00000421058 NCAPD3P42695 1498 aa14.99□□□□□ -0.01
PUDPP1-201ENST00000421058 RSF1Q96T23 1441 aaPredicted RBP14.95□□□□□ -0.02
PUDPP1-201ENST00000421058 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
PUDPP1-201ENST00000421058 PEG3Q9GZU2 1588 aa14.94□□□□□ -0.02
PUDPP1-201ENST00000421058 HMGXB3Q12766 1538 aa14.91□□□□□ -0.02
PUDPP1-201ENST00000421058 WIZO95785 1651 aa14.87□□□□□ -0.03
PUDPP1-201ENST00000421058 SUPT5HO00267 1087 aaKnown RBP14.86□□□□□ -0.03
PUDPP1-201ENST00000421058 TOP2AP11388 1531 aaKnown RBP14.76□□□□□ -0.05
PUDPP1-201ENST00000421058 CADPSQ9ULU8 1353 aa14.6□□□□□ -0.07
PUDPP1-201ENST00000421058 CCDC88BA6NC98 1476 aa14.6□□□□□ -0.07
PUDPP1-201ENST00000421058 LAMC3Q9Y6N6 1575 aa14.58□□□□□ -0.08
PUDPP1-201ENST00000421058 PDS5BQ9NTI5 1447 aa14.57□□□□□ -0.08
PUDPP1-201ENST00000421058 ERCC6Q03468 1493 aa14.54□□□□□ -0.08
PUDPP1-201ENST00000421058 CFTRP13569 1480 aa14.5□□□□□ -0.09
PUDPP1-201ENST00000421058 NESP48681 1621 aa14.5□□□□□ -0.09
PUDPP1-201ENST00000421058 FANCD2Q9BXW9 1451 aa14.41□□□□□ -0.1
PUDPP1-201ENST00000421058 CEP164Q9UPV0 1460 aa14.4□□□□□ -0.1
PUDPP1-201ENST00000421058 PRDM2Q13029 1718 aa14.37□□□□□ -0.11
PUDPP1-201ENST00000421058 KIF21AQ7Z4S6 1674 aa14.33□□□□□ -0.11
PUDPP1-201ENST00000421058 MRC2Q9UBG0 1479 aa14.31□□□□□ -0.12
PUDPP1-201ENST00000421058 ABCC8Q09428 1581 aa14.3□□□□□ -0.12
PUDPP1-201ENST00000421058 CUX2O14529 1486 aa14.26□□□□□ -0.13
PUDPP1-201ENST00000421058 THOC2Q8NI27 1593 aaKnown RBP14.22□□□□□ -0.13
PUDPP1-201ENST00000421058 WDR62O43379 1518 aa14.21□□□□□ -0.13
PUDPP1-201ENST00000421058 DNMBPQ6XZF7 1577 aa14.17□□□□□ -0.14
PUDPP1-201ENST00000421058 URB2Q14146 1524 aaKnown RBP14.17□□□□□ -0.14
PUDPP1-201ENST00000421058 WRNQ14191 1432 aaPredicted RBP eCLIP14.16□□□□□ -0.14
PUDPP1-201ENST00000421058 TOPBP1Q92547 1522 aa14.16□□□□□ -0.14
PUDPP1-201ENST00000421058 IFT140Q96RY7 1462 aa14.09□□□□□ -0.15
PUDPP1-201ENST00000421058 SOGA1O94964 1423 aa14.08□□□□□ -0.15
PUDPP1-201ENST00000421058 TRIM41Q8WV44 630 aa14.08□□□□□ -0.16
PUDPP1-201ENST00000421058 CUX1P39880 1505 aa14.08□□□□□ -0.16
PUDPP1-201ENST00000421058 FGD5Q6ZNL6 1462 aa14.06□□□□□ -0.16
PUDPP1-201ENST00000421058 TOP2BQ02880 1626 aa14.05□□□□□ -0.16
PUDPP1-201ENST00000421058 POLA1P09884 1462 aaPredicted RBP14.05□□□□□ -0.16
PUDPP1-201ENST00000421058 BIVM-ERCC5R4GMW8 1640 aa14.02□□□□□ -0.16
PUDPP1-201ENST00000421058 SYNJ1O43426 1573 aa14□□□□□ -0.17
PUDPP1-201ENST00000421058 RAD54L2Q9Y4B4 1467 aa13.99□□□□□ -0.17
PUDPP1-201ENST00000421058 TDRD9Q8NDG6 1382 aaKnown RBP13.95□□□□□ -0.18
PUDPP1-201ENST00000421058 WDR97A6NE52 1622 aa13.94□□□□□ -0.18
PUDPP1-201ENST00000421058 TARBP1Q13395 1621 aaKnown RBP13.94□□□□□ -0.18
PUDPP1-201ENST00000421058 ABCA10Q8WWZ4 1543 aa13.94□□□□□ -0.18
PUDPP1-201ENST00000421058 AQRO60306 1485 aaKnown RBP eCLIP13.92□□□□□ -0.18
PUDPP1-201ENST00000421058 ZNF608Q9ULD9 1512 aaPredicted RBP13.91□□□□□ -0.18
PUDPP1-201ENST00000421058 CHIC1Q5VXU3 224 aa13.91□□□□□ -0.18
PUDPP1-201ENST00000421058 KIF27Q86VH2 1401 aa13.9□□□□□ -0.18
PUDPP1-201ENST00000421058 GAPVD1Q14C86 1478 aa13.9□□□□□ -0.18
PUDPP1-201ENST00000421058 GRIN2BQ13224 1484 aa13.88□□□□□ -0.19
PUDPP1-201ENST00000421058 EIF4G3O43432 1585 aaKnown RBP13.88□□□□□ -0.19
PUDPP1-201ENST00000421058 FBLN2P98095 1184 aa13.87□□□□□ -0.19
PUDPP1-201ENST00000421058 CHMP7Q8WUX9 453 aaPredicted RBP13.86□□□□□ -0.19
PUDPP1-201ENST00000421058 OSCARQ8IYS5 282 aa13.82□□□□□ -0.2
PUDPP1-201ENST00000421058 MAGI1Q96QZ7 1491 aaPredicted RBP13.81□□□□□ -0.2
PUDPP1-201ENST00000421058 ABCA5Q8WWZ7 1642 aa13.8□□□□□ -0.2
PUDPP1-201ENST00000421058 ERICH3Q5RHP9 1530 aa13.8□□□□□ -0.2
PUDPP1-201ENST00000421058 SNAPC4Q5SXM2 1469 aa13.79□□□□□ -0.2
PUDPP1-201ENST00000421058 EEA1Q15075 1411 aa13.78□□□□□ -0.2
PUDPP1-201ENST00000421058 PBRM1Q86U86 1689 aa13.78□□□□□ -0.2
PUDPP1-201ENST00000421058 SYNJ2O15056 1496 aa13.75□□□□□ -0.21
PUDPP1-201ENST00000421058 FHAD1B1AJZ9 1412 aa13.75□□□□□ -0.21
PUDPP1-201ENST00000421058 IGF1RP08069 1367 aa13.75□□□□□ -0.21
PUDPP1-201ENST00000421058 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
PUDPP1-201ENST00000421058 CARMIL1Q5VZK9 1371 aa13.73□□□□□ -0.21
PUDPP1-201ENST00000421058 FAM9AQ8IZU1 332 aaPredicted RBP13.73□□□□□ -0.21
PUDPP1-201ENST00000421058 CUL7Q14999 1698 aa13.71□□□□□ -0.21
PUDPP1-201ENST00000421058 ADAMTS12P58397 1594 aa13.67□□□□□ -0.22
PUDPP1-201ENST00000421058 RUSC2Q8N2Y8 1516 aa13.67□□□□□ -0.22
PUDPP1-201ENST00000421058 CHD1O14646 1710 aa13.66□□□□□ -0.22
PUDPP1-201ENST00000421058 GRIN2AQ12879 1464 aa13.66□□□□□ -0.22
PUDPP1-201ENST00000421058 RAPGEF2Q9Y4G8 1499 aa13.65□□□□□ -0.22
PUDPP1-201ENST00000421058 DNAJC5Q9H3Z4 198 aa13.64□□□□□ -0.23
PUDPP1-201ENST00000421058 UBTFP17480 764 aaKnown RBP13.59□□□□□ -0.23
PUDPP1-201ENST00000421058 PRXQ9BXM0 1461 aa13.57□□□□□ -0.24
PUDPP1-201ENST00000421058 NUP160Q12769 1436 aa13.56□□□□□ -0.24
PUDPP1-201ENST00000421058 JPH4Q96JJ6 628 aa13.56□□□□□ -0.24
PUDPP1-201ENST00000421058 KIAA0586Q9BVV6 1533 aa13.54□□□□□ -0.24
PUDPP1-201ENST00000421058 EHMT2Q96KQ7 1210 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms