RNA–Protein interactions for RNA: ENST00000420705.1

LINC00237-201, long intergenic non-protein coding RNA 237, humanhuman

TSL 2

Gene LINC00237, Length 359 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00237-201ENST00000420705 NISCHQ9Y2I1 1504 aa40.03■■■■■ 4
LINC00237-201ENST00000420705 CCDC180Q9P1Z9 1646 aa35.46■■■■□ 3.27
LINC00237-201ENST00000420705 ABCC9O60706 1549 aa34.4■■■■□ 3.1
LINC00237-201ENST00000420705 DCAF8L2P0C7V8 631 aa33.47■■■□□ 2.95
LINC00237-201ENST00000420705 ZCCHC6Q5VYS8 1495 aaKnown RBP33.4■■■□□ 2.94
LINC00237-201ENST00000420705 NACADO15069 1562 aa33.3■■■□□ 2.92
LINC00237-201ENST00000420705 RB1CC1Q8TDY2 1594 aa33.28■■■□□ 2.92
LINC00237-201ENST00000420705 MYO15BQ96JP2 1530 aa33.18■■■□□ 2.9
LINC00237-201ENST00000420705 DCAF1Q9Y4B6 1507 aa33.16■■■□□ 2.9
LINC00237-201ENST00000420705 SCRIBQ14160 1630 aa32.39■■■□□ 2.78
LINC00237-201ENST00000420705 UNC13AQ9UPW8 1703 aa32.36■■■□□ 2.77
LINC00237-201ENST00000420705 PABPN1Q86U42 306 aaKnown RBP eCLIP32.2■■■□□ 2.75
LINC00237-201ENST00000420705 BICRAQ9NZM4 1560 aa32.1■■■□□ 2.73
LINC00237-201ENST00000420705 SHROOM4Q9ULL8 1493 aa31.97■■■□□ 2.71
LINC00237-201ENST00000420705 EIF4G1Q04637 1599 aaKnown RBP31.31■■■□□ 2.6
LINC00237-201ENST00000420705 DNAJC5BQ9UF47 199 aa31.14■■■□□ 2.58
LINC00237-201ENST00000420705 CC2D2AQ9P2K1 1620 aa31.1■■■□□ 2.57
LINC00237-201ENST00000420705 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
LINC00237-201ENST00000420705 BAZ1AQ9NRL2 1556 aaPredicted RBP31.06■■■□□ 2.56
LINC00237-201ENST00000420705 SMARCA4P51532 1647 aa30.99■■■□□ 2.55
LINC00237-201ENST00000420705 MROH2BQ7Z745 1585 aa30.82■■■□□ 2.52
LINC00237-201ENST00000420705 SMARCA2P51531 1590 aa30.8■■■□□ 2.52
LINC00237-201ENST00000420705 ATAD2BQ9ULI0 1458 aa30.75■■■□□ 2.51
LINC00237-201ENST00000420705 NCAPD3P42695 1498 aa30.69■■■□□ 2.5
LINC00237-201ENST00000420705 PEG3Q9GZU2 1588 aa30.66■■■□□ 2.5
LINC00237-201ENST00000420705 RSF1Q96T23 1441 aaPredicted RBP30.62■■■□□ 2.49
LINC00237-201ENST00000420705 HMGXB3Q12766 1538 aa30.58■■■□□ 2.49
LINC00237-201ENST00000420705 BAZ1BQ9UIG0 1483 aaKnown RBP30.58■■■□□ 2.49
LINC00237-201ENST00000420705 WIZO95785 1651 aa30.5■■■□□ 2.47
LINC00237-201ENST00000420705 TOP2AP11388 1531 aaKnown RBP30.27■■■□□ 2.44
LINC00237-201ENST00000420705 SUPT5HO00267 1087 aaKnown RBP30.2■■■□□ 2.43
LINC00237-201ENST00000420705 CCDC88BA6NC98 1476 aa29.88■■■□□ 2.37
LINC00237-201ENST00000420705 LAMC3Q9Y6N6 1575 aa29.86■■■□□ 2.37
LINC00237-201ENST00000420705 CADPSQ9ULU8 1353 aa29.85■■■□□ 2.37
LINC00237-201ENST00000420705 NESP48681 1621 aa29.79■■■□□ 2.36
LINC00237-201ENST00000420705 ERCC6Q03468 1493 aa29.74■■■□□ 2.35
LINC00237-201ENST00000420705 PDS5BQ9NTI5 1447 aa29.71■■■□□ 2.35
LINC00237-201ENST00000420705 CFTRP13569 1480 aa29.7■■■□□ 2.35
LINC00237-201ENST00000420705 FANCD2Q9BXW9 1451 aa29.5■■■□□ 2.31
LINC00237-201ENST00000420705 PRDM2Q13029 1718 aa29.5■■■□□ 2.31
LINC00237-201ENST00000420705 CEP164Q9UPV0 1460 aa29.47■■■□□ 2.31
LINC00237-201ENST00000420705 KIF21AQ7Z4S6 1674 aa29.47■■■□□ 2.31
LINC00237-201ENST00000420705 MRC2Q9UBG0 1479 aa29.34■■■□□ 2.29
LINC00237-201ENST00000420705 THOC2Q8NI27 1593 aaKnown RBP29.28■■■□□ 2.28
LINC00237-201ENST00000420705 CUX2O14529 1486 aa29.24■■■□□ 2.27
LINC00237-201ENST00000420705 WDR62O43379 1518 aa29.19■■■□□ 2.26
LINC00237-201ENST00000420705 ABCC8Q09428 1581 aa29.16■■■□□ 2.26
LINC00237-201ENST00000420705 URB2Q14146 1524 aaKnown RBP29.12■■■□□ 2.25
LINC00237-201ENST00000420705 DNMBPQ6XZF7 1577 aa29.06■■■□□ 2.24
LINC00237-201ENST00000420705 TOPBP1Q92547 1522 aa29.04■■■□□ 2.24
LINC00237-201ENST00000420705 WRNQ14191 1432 aaPredicted RBP eCLIP28.93■■■□□ 2.22
LINC00237-201ENST00000420705 CUX1P39880 1505 aa28.91■■■□□ 2.22
LINC00237-201ENST00000420705 IFT140Q96RY7 1462 aa28.84■■■□□ 2.21
LINC00237-201ENST00000420705 POLA1P09884 1462 aaPredicted RBP28.81■■■□□ 2.2
LINC00237-201ENST00000420705 FGD5Q6ZNL6 1462 aa28.8■■■□□ 2.2
LINC00237-201ENST00000420705 TOP2BQ02880 1626 aa28.78■■■□□ 2.2
LINC00237-201ENST00000420705 SOGA1O94964 1423 aa28.76■■■□□ 2.19
LINC00237-201ENST00000420705 BIVM-ERCC5R4GMW8 1640 aa28.76■■■□□ 2.19
LINC00237-201ENST00000420705 SYNJ1O43426 1573 aa28.75■■■□□ 2.19
LINC00237-201ENST00000420705 RAD54L2Q9Y4B4 1467 aa28.66■■■□□ 2.18
LINC00237-201ENST00000420705 TARBP1Q13395 1621 aaKnown RBP28.65■■■□□ 2.18
LINC00237-201ENST00000420705 ZNF608Q9ULD9 1512 aaPredicted RBP28.58■■■□□ 2.17
LINC00237-201ENST00000420705 TRIM41Q8WV44 630 aa28.56■■■□□ 2.16
LINC00237-201ENST00000420705 WDR97A6NE52 1622 aa28.55■■■□□ 2.16
LINC00237-201ENST00000420705 ABCA10Q8WWZ4 1543 aa28.54■■■□□ 2.16
LINC00237-201ENST00000420705 TDRD9Q8NDG6 1382 aaKnown RBP28.52■■■□□ 2.16
LINC00237-201ENST00000420705 EIF4G3O43432 1585 aaKnown RBP28.51■■■□□ 2.15
LINC00237-201ENST00000420705 AQRO60306 1485 aaKnown RBP eCLIP28.5■■■□□ 2.15
LINC00237-201ENST00000420705 GAPVD1Q14C86 1478 aa28.42■■■□□ 2.14
LINC00237-201ENST00000420705 GRIN2BQ13224 1484 aa28.39■■■□□ 2.13
LINC00237-201ENST00000420705 ABCA5Q8WWZ7 1642 aa28.36■■■□□ 2.13
LINC00237-201ENST00000420705 KIF27Q86VH2 1401 aa28.35■■■□□ 2.13
LINC00237-201ENST00000420705 CHIC1Q5VXU3 224 aa28.3■■■□□ 2.12
LINC00237-201ENST00000420705 PBRM1Q86U86 1689 aa28.29■■■□□ 2.12
LINC00237-201ENST00000420705 MAGI1Q96QZ7 1491 aaPredicted RBP28.28■■■□□ 2.12
LINC00237-201ENST00000420705 SNAPC4Q5SXM2 1469 aa28.27■■■□□ 2.12
LINC00237-201ENST00000420705 ERICH3Q5RHP9 1530 aa28.23■■■□□ 2.11
LINC00237-201ENST00000420705 FBLN2P98095 1184 aa28.23■■■□□ 2.11
LINC00237-201ENST00000420705 CHMP7Q8WUX9 453 aaPredicted RBP28.19■■■□□ 2.1
LINC00237-201ENST00000420705 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
LINC00237-201ENST00000420705 OSCARQ8IYS5 282 aa28.13■■■□□ 2.09
LINC00237-201ENST00000420705 FHAD1B1AJZ9 1412 aa28.12■■■□□ 2.09
LINC00237-201ENST00000420705 IGF1RP08069 1367 aa28.1■■■□□ 2.09
LINC00237-201ENST00000420705 ADAMTS12P58397 1594 aa28.09■■■□□ 2.09
LINC00237-201ENST00000420705 CHD1O14646 1710 aa28.07■■■□□ 2.08
LINC00237-201ENST00000420705 CUL7Q14999 1698 aa28.06■■■□□ 2.08
LINC00237-201ENST00000420705 EEA1Q15075 1411 aa28.04■■■□□ 2.08
LINC00237-201ENST00000420705 RUSC2Q8N2Y8 1516 aa28.01■■■□□ 2.07
LINC00237-201ENST00000420705 CARMIL1Q5VZK9 1371 aa27.99■■■□□ 2.07
LINC00237-201ENST00000420705 GRIN2AQ12879 1464 aa27.99■■■□□ 2.07
LINC00237-201ENST00000420705 DNAJC5Q9H3Z4 198 aa27.95■■■□□ 2.06
LINC00237-201ENST00000420705 CSRNP3Q8WYN3 585 aa27.92■■■□□ 2.06
LINC00237-201ENST00000420705 FAM9AQ8IZU1 332 aaPredicted RBP27.9■■■□□ 2.06
LINC00237-201ENST00000420705 RAPGEF2Q9Y4G8 1499 aa27.87■■■□□ 2.05
LINC00237-201ENST00000420705 NUP160Q12769 1436 aa27.83■■■□□ 2.05
LINC00237-201ENST00000420705 PRXQ9BXM0 1461 aa27.78■■■□□ 2.04
LINC00237-201ENST00000420705 CEP170Q5SW79 1584 aa27.77■■■□□ 2.04
LINC00237-201ENST00000420705 CLASP1Q7Z460 1538 aa27.77■■■□□ 2.04
LINC00237-201ENST00000420705 KIAA0586Q9BVV6 1533 aa27.68■■■□□ 2.02
LINC00237-201ENST00000420705 KIF21BO75037 1637 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms