RNA–Protein interactions for RNA: ENST00000420588.5

SCAP-205, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-205ENST00000420588 NISCHQ9Y2I1 1504 aa32.84■■■□□ 2.85
SCAP-205ENST00000420588 CCDC180Q9P1Z9 1646 aa29.02■■■□□ 2.24
SCAP-205ENST00000420588 ABCC9O60706 1549 aa28.28■■■□□ 2.12
SCAP-205ENST00000420588 DCAF8L2P0C7V8 631 aa27.58■■■□□ 2.01
SCAP-205ENST00000420588 ZCCHC6Q5VYS8 1495 aaKnown RBP27.37■■□□□ 1.97
SCAP-205ENST00000420588 NACADO15069 1562 aa27.29■■□□□ 1.96
SCAP-205ENST00000420588 RB1CC1Q8TDY2 1594 aa27.27■■□□□ 1.96
SCAP-205ENST00000420588 MYO15BQ96JP2 1530 aa27.16■■□□□ 1.94
SCAP-205ENST00000420588 DCAF1Q9Y4B6 1507 aa27.14■■□□□ 1.94
SCAP-205ENST00000420588 SCRIBQ14160 1630 aa26.57■■□□□ 1.84
SCAP-205ENST00000420588 UNC13AQ9UPW8 1703 aa26.56■■□□□ 1.84
SCAP-205ENST00000420588 PABPN1Q86U42 306 aaKnown RBP eCLIP26.54■■□□□ 1.84
SCAP-205ENST00000420588 BICRAQ9NZM4 1560 aa26.37■■□□□ 1.81
SCAP-205ENST00000420588 SHROOM4Q9ULL8 1493 aa26.22■■□□□ 1.79
SCAP-205ENST00000420588 DNAJC5BQ9UF47 199 aa25.74■■□□□ 1.71
SCAP-205ENST00000420588 EIF4G1Q04637 1599 aaKnown RBP25.69■■□□□ 1.7
SCAP-205ENST00000420588 CECR2Q9BXF3 1484 aa25.57■■□□□ 1.68
SCAP-205ENST00000420588 CC2D2AQ9P2K1 1620 aa25.54■■□□□ 1.68
SCAP-205ENST00000420588 BAZ1AQ9NRL2 1556 aaPredicted RBP25.44■■□□□ 1.66
SCAP-205ENST00000420588 SMARCA4P51532 1647 aa25.41■■□□□ 1.66
SCAP-205ENST00000420588 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
SCAP-205ENST00000420588 ATAD2BQ9ULI0 1458 aa25.24■■□□□ 1.63
SCAP-205ENST00000420588 SMARCA2P51531 1590 aa25.22■■□□□ 1.63
SCAP-205ENST00000420588 NCAPD3P42695 1498 aa25.19■■□□□ 1.62
SCAP-205ENST00000420588 RSF1Q96T23 1441 aaPredicted RBP25.13■■□□□ 1.61
SCAP-205ENST00000420588 PEG3Q9GZU2 1588 aa25.11■■□□□ 1.61
SCAP-205ENST00000420588 BAZ1BQ9UIG0 1483 aaKnown RBP25.08■■□□□ 1.6
SCAP-205ENST00000420588 WIZO95785 1651 aa25.05■■□□□ 1.6
SCAP-205ENST00000420588 HMGXB3Q12766 1538 aa25.04■■□□□ 1.6
SCAP-205ENST00000420588 SUPT5HO00267 1087 aaKnown RBP24.85■■□□□ 1.57
SCAP-205ENST00000420588 TOP2AP11388 1531 aaKnown RBP24.79■■□□□ 1.56
SCAP-205ENST00000420588 CCDC88BA6NC98 1476 aa24.54■■□□□ 1.52
SCAP-205ENST00000420588 NESP48681 1621 aa24.52■■□□□ 1.52
SCAP-205ENST00000420588 CADPSQ9ULU8 1353 aa24.51■■□□□ 1.51
SCAP-205ENST00000420588 LAMC3Q9Y6N6 1575 aa24.46■■□□□ 1.51
SCAP-205ENST00000420588 ERCC6Q03468 1493 aa24.39■■□□□ 1.5
SCAP-205ENST00000420588 PDS5BQ9NTI5 1447 aa24.37■■□□□ 1.49
SCAP-205ENST00000420588 CFTRP13569 1480 aa24.37■■□□□ 1.49
SCAP-205ENST00000420588 FANCD2Q9BXW9 1451 aa24.21■■□□□ 1.47
SCAP-205ENST00000420588 KIF21AQ7Z4S6 1674 aa24.18■■□□□ 1.46
SCAP-205ENST00000420588 CEP164Q9UPV0 1460 aa24.15■■□□□ 1.46
SCAP-205ENST00000420588 PRDM2Q13029 1718 aa24.12■■□□□ 1.45
SCAP-205ENST00000420588 MRC2Q9UBG0 1479 aa24.06■■□□□ 1.44
SCAP-205ENST00000420588 THOC2Q8NI27 1593 aaKnown RBP24.01■■□□□ 1.43
SCAP-205ENST00000420588 CUX2O14529 1486 aa23.97■■□□□ 1.43
SCAP-205ENST00000420588 WDR62O43379 1518 aa23.92■■□□□ 1.42
SCAP-205ENST00000420588 URB2Q14146 1524 aaKnown RBP23.92■■□□□ 1.42
SCAP-205ENST00000420588 ABCC8Q09428 1581 aa23.88■■□□□ 1.41
SCAP-205ENST00000420588 TOPBP1Q92547 1522 aa23.84■■□□□ 1.41
SCAP-205ENST00000420588 DNMBPQ6XZF7 1577 aa23.81■■□□□ 1.4
SCAP-205ENST00000420588 CUX1P39880 1505 aa23.73■■□□□ 1.39
SCAP-205ENST00000420588 WRNQ14191 1432 aaPredicted RBP eCLIP23.72■■□□□ 1.39
SCAP-205ENST00000420588 POLA1P09884 1462 aaPredicted RBP23.64■■□□□ 1.38
SCAP-205ENST00000420588 IFT140Q96RY7 1462 aa23.64■■□□□ 1.38
SCAP-205ENST00000420588 FGD5Q6ZNL6 1462 aa23.63■■□□□ 1.37
SCAP-205ENST00000420588 SOGA1O94964 1423 aa23.62■■□□□ 1.37
SCAP-205ENST00000420588 SYNJ1O43426 1573 aa23.58■■□□□ 1.37
SCAP-205ENST00000420588 TOP2BQ02880 1626 aa23.58■■□□□ 1.36
SCAP-205ENST00000420588 RAD54L2Q9Y4B4 1467 aa23.57■■□□□ 1.36
SCAP-205ENST00000420588 BIVM-ERCC5R4GMW8 1640 aa23.55■■□□□ 1.36
SCAP-205ENST00000420588 TARBP1Q13395 1621 aaKnown RBP23.5■■□□□ 1.35
SCAP-205ENST00000420588 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
SCAP-205ENST00000420588 TDRD9Q8NDG6 1382 aaKnown RBP23.46■■□□□ 1.35
SCAP-205ENST00000420588 TRIM41Q8WV44 630 aa23.45■■□□□ 1.34
SCAP-205ENST00000420588 AQRO60306 1485 aaKnown RBP eCLIP23.44■■□□□ 1.341e-6■■■■■ 30.9
SCAP-205ENST00000420588 ABCA10Q8WWZ4 1543 aa23.4■■□□□ 1.34
SCAP-205ENST00000420588 EIF4G3O43432 1585 aaKnown RBP23.37■■□□□ 1.33
SCAP-205ENST00000420588 WDR97A6NE52 1622 aa23.33■■□□□ 1.32
SCAP-205ENST00000420588 GAPVD1Q14C86 1478 aa23.32■■□□□ 1.32
SCAP-205ENST00000420588 CHIC1Q5VXU3 224 aa23.28■■□□□ 1.32
SCAP-205ENST00000420588 GRIN2BQ13224 1484 aa23.28■■□□□ 1.32
SCAP-205ENST00000420588 ABCA5Q8WWZ7 1642 aa23.24■■□□□ 1.31
SCAP-205ENST00000420588 FBLN2P98095 1184 aa23.24■■□□□ 1.31
SCAP-205ENST00000420588 KIF27Q86VH2 1401 aa23.23■■□□□ 1.31
SCAP-205ENST00000420588 SNAPC4Q5SXM2 1469 aa23.2■■□□□ 1.3
SCAP-205ENST00000420588 CHMP7Q8WUX9 453 aaPredicted RBP23.18■■□□□ 1.3
SCAP-205ENST00000420588 PBRM1Q86U86 1689 aa23.17■■□□□ 1.3
SCAP-205ENST00000420588 MAGI1Q96QZ7 1491 aaPredicted RBP23.17■■□□□ 1.3
SCAP-205ENST00000420588 OSCARQ8IYS5 282 aa23.15■■□□□ 1.3
SCAP-205ENST00000420588 ERICH3Q5RHP9 1530 aa23.13■■□□□ 1.29
SCAP-205ENST00000420588 IGF1RP08069 1367 aa23.1■■□□□ 1.29
SCAP-205ENST00000420588 SYNJ2O15056 1496 aa23.08■■□□□ 1.29
SCAP-205ENST00000420588 FHAD1B1AJZ9 1412 aa23.07■■□□□ 1.28
SCAP-205ENST00000420588 RUSC2Q8N2Y8 1516 aa23.06■■□□□ 1.28
SCAP-205ENST00000420588 CHD1O14646 1710 aa23.03■■□□□ 1.28
SCAP-205ENST00000420588 DNAJC5Q9H3Z4 198 aa23.02■■□□□ 1.28
SCAP-205ENST00000420588 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
SCAP-205ENST00000420588 FAM9AQ8IZU1 332 aaPredicted RBP22.99■■□□□ 1.27
SCAP-205ENST00000420588 CARMIL1Q5VZK9 1371 aa22.99■■□□□ 1.27
SCAP-205ENST00000420588 GRIN2AQ12879 1464 aa22.96■■□□□ 1.27
SCAP-205ENST00000420588 CUL7Q14999 1698 aa22.95■■□□□ 1.26
SCAP-205ENST00000420588 CSRNP3Q8WYN3 585 aa22.95■■□□□ 1.26
SCAP-205ENST00000420588 EEA1Q15075 1411 aa22.94■■□□□ 1.26
SCAP-205ENST00000420588 RAPGEF2Q9Y4G8 1499 aa22.85■■□□□ 1.25
SCAP-205ENST00000420588 NUP160Q12769 1436 aa22.82■■□□□ 1.24
SCAP-205ENST00000420588 CEP170Q5SW79 1584 aa22.8■■□□□ 1.24
SCAP-205ENST00000420588 PRXQ9BXM0 1461 aa22.79■■□□□ 1.24
SCAP-205ENST00000420588 CLASP1Q7Z460 1538 aa22.77■■□□□ 1.24
SCAP-205ENST00000420588 KIAA0586Q9BVV6 1533 aa22.72■■□□□ 1.23
SCAP-205ENST00000420588 JPH4Q96JJ6 628 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 245.7 ms