RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 CHIC1Q5VXU3 224 aa10.13□□□□□ -0.79
PTPN22-202ENST00000420377 AEBP2Q6ZN18 517 aaPredicted RBP10.13□□□□□ -0.79
PTPN22-202ENST00000420377 POTEDQ86YR6 584 aa9.59□□□□□ -0.87
PTPN22-202ENST00000420377 NISCHQ9Y2I1 1504 aa9.31□□□□□ -0.92
PTPN22-202ENST00000420377 PHF23Q9BUL5 403 aaPredicted RBP9.07□□□□□ -0.96
PTPN22-202ENST00000420377 CCDC180Q9P1Z9 1646 aa8.84□□□□□ -0.99
PTPN22-202ENST00000420377 SHROOM4Q9ULL8 1493 aa8.48□□□□□ -1.05
PTPN22-202ENST00000420377 ABCC9O60706 1549 aa8.44□□□□□ -1.06
PTPN22-202ENST00000420377 MYO15BQ96JP2 1530 aa8.41□□□□□ -1.06
PTPN22-202ENST00000420377 RB1CC1Q8TDY2 1594 aa8.4□□□□□ -1.07
PTPN22-202ENST00000420377 PLPPR3Q6T4P5 718 aa8.39□□□□□ -1.07
PTPN22-202ENST00000420377 SENP3Q9H4L4 574 aaPredicted RBP8.37□□□□□ -1.07
PTPN22-202ENST00000420377 NACADO15069 1562 aa8.36□□□□□ -1.07
PTPN22-202ENST00000420377 DNAJC5BQ9UF47 199 aa8.09□□□□□ -1.11
PTPN22-202ENST00000420377 DCAF1Q9Y4B6 1507 aa8.07□□□□□ -1.12
PTPN22-202ENST00000420377 DNAJC5Q9H3Z4 198 aa8.06□□□□□ -1.12
PTPN22-202ENST00000420377 ADRA2BP18089 450 aa8.05□□□□□ -1.12
PTPN22-202ENST00000420377 BICRAQ9NZM4 1560 aa8□□□□□ -1.13
PTPN22-202ENST00000420377 UNC13AQ9UPW8 1703 aa7.99□□□□□ -1.13
PTPN22-202ENST00000420377 CUX2O14529 1486 aa7.99□□□□□ -1.13
PTPN22-202ENST00000420377 EHMT2Q96KQ7 1210 aa7.94□□□□□ -1.14
PTPN22-202ENST00000420377 PPP6R1Q9UPN7 881 aa7.93□□□□□ -1.14
PTPN22-202ENST00000420377 KCNA4P22459 653 aa7.89□□□□□ -1.15
PTPN22-202ENST00000420377 CECR2Q9BXF3 1484 aa7.85□□□□□ -1.15
PTPN22-202ENST00000420377 CC2D2AQ9P2K1 1620 aa7.85□□□□□ -1.15
PTPN22-202ENST00000420377 FOXD1Q16676 465 aa7.83□□□□□ -1.16
PTPN22-202ENST00000420377 EIF4G1Q04637 1599 aaKnown RBP7.82□□□□□ -1.16
PTPN22-202ENST00000420377 ZCCHC6Q5VYS8 1495 aaKnown RBP7.67□□□□□ -1.18
PTPN22-202ENST00000420377 NCAPD3P42695 1498 aa7.64□□□□□ -1.19
PTPN22-202ENST00000420377 MYT1Q01538 1121 aa7.64□□□□□ -1.19
PTPN22-202ENST00000420377 HMGXB3Q12766 1538 aa7.62□□□□□ -1.19
PTPN22-202ENST00000420377 PELP1Q8IZL8 1130 aaKnown RBP7.61□□□□□ -1.19
PTPN22-202ENST00000420377 PABPN1Q86U42 306 aaKnown RBP eCLIP7.59□□□□□ -1.19
PTPN22-202ENST00000420377 SMARCA2P51531 1590 aa7.57□□□□□ -1.2
PTPN22-202ENST00000420377 LAMC3Q9Y6N6 1575 aa7.55□□□□□ -1.2
PTPN22-202ENST00000420377 PEG3Q9GZU2 1588 aa7.52□□□□□ -1.21
PTPN22-202ENST00000420377 CSRNP3Q8WYN3 585 aa7.52□□□□□ -1.21
PTPN22-202ENST00000420377 PIAS4Q8N2W9 510 aaPredicted RBP7.51□□□□□ -1.21
PTPN22-202ENST00000420377 SLC4A1APQ9BWU0 796 aaKnown RBP7.5□□□□□ -1.21
PTPN22-202ENST00000420377 THOC2Q8NI27 1593 aaKnown RBP7.5□□□□□ -1.21
PTPN22-202ENST00000420377 PPP4R3CPQ6ZMV5 832 aa7.5□□□□□ -1.21
PTPN22-202ENST00000420377 TTBK1Q5TCY1 1321 aaPredicted RBP7.49□□□□□ -1.21
PTPN22-202ENST00000420377 SCRIBQ14160 1630 aa7.47□□□□□ -1.21
PTPN22-202ENST00000420377 SLC24A1O60721 1099 aa7.47□□□□□ -1.21
PTPN22-202ENST00000420377 ERCC6Q03468 1493 aa7.45□□□□□ -1.22
PTPN22-202ENST00000420377 PDS5BQ9NTI5 1447 aa7.41□□□□□ -1.22
PTPN22-202ENST00000420377 WDR62O43379 1518 aa7.4□□□□□ -1.22
PTPN22-202ENST00000420377 ATAD2BQ9ULI0 1458 aa7.39□□□□□ -1.23
PTPN22-202ENST00000420377 NPM3O75607 178 aaKnown RBP7.35□□□□□ -1.23
PTPN22-202ENST00000420377 WDR97A6NE52 1622 aa7.34□□□□□ -1.23
PTPN22-202ENST00000420377 MRC2Q9UBG0 1479 aa7.34□□□□□ -1.23
PTPN22-202ENST00000420377 BAZ1AQ9NRL2 1556 aaPredicted RBP7.32□□□□□ -1.24
PTPN22-202ENST00000420377 SMARCA4P51532 1647 aa7.32□□□□□ -1.24
PTPN22-202ENST00000420377 NCBP3Q53F19 620 aaKnown RBP7.3□□□□□ -1.24
PTPN22-202ENST00000420377 ZBTB22O15209 634 aa7.29□□□□□ -1.24
PTPN22-202ENST00000420377 BAZ1BQ9UIG0 1483 aaKnown RBP7.29□□□□□ -1.24
PTPN22-202ENST00000420377 RSF1Q96T23 1441 aaPredicted RBP7.25□□□□□ -1.25
PTPN22-202ENST00000420377 ABCC8Q09428 1581 aa7.25□□□□□ -1.25
PTPN22-202ENST00000420377 CADPSQ9ULU8 1353 aa7.23□□□□□ -1.25
PTPN22-202ENST00000420377 KIF21AQ7Z4S6 1674 aa7.23□□□□□ -1.25
PTPN22-202ENST00000420377 OSCARQ8IYS5 282 aa7.22□□□□□ -1.25
PTPN22-202ENST00000420377 PRDM2Q13029 1718 aa7.22□□□□□ -1.25
PTPN22-202ENST00000420377 DCAF8L2P0C7V8 631 aa7.2□□□□□ -1.26
PTPN22-202ENST00000420377 POTEHQ6S545 545 aa7.2□□□□□ -1.26
PTPN22-202ENST00000420377 RIMBP3CA6NJZ7 1639 aa7.19□□□□□ -1.26
PTPN22-202ENST00000420377 RIMBP3BA6NNM3 1639 aa7.19□□□□□ -1.26
PTPN22-202ENST00000420377 RIMBP3Q9UFD9 1639 aa7.19□□□□□ -1.26
PTPN22-202ENST00000420377 IFT140Q96RY7 1462 aa7.17□□□□□ -1.26
PTPN22-202ENST00000420377 CEP164Q9UPV0 1460 aa7.17□□□□□ -1.26
PTPN22-202ENST00000420377 APLP2Q06481 763 aa7.15□□□□□ -1.26
PTPN22-202ENST00000420377 CFTRP13569 1480 aa7.14□□□□□ -1.27
PTPN22-202ENST00000420377 PRKCSHP14314 528 aaPredicted RBP7.14□□□□□ -1.27
PTPN22-202ENST00000420377 NESP48681 1621 aa7.13□□□□□ -1.27
PTPN22-202ENST00000420377 ERICH6Q7L0X2 663 aa7.13□□□□□ -1.27
PTPN22-202ENST00000420377 CNKSR2Q8WXI2 1034 aa7.13□□□□□ -1.27
PTPN22-202ENST00000420377 MAPK8IP2Q13387 824 aaPredicted RBP7.12□□□□□ -1.27
PTPN22-202ENST00000420377 ARHGEF11O15085 1522 aa7.11□□□□□ -1.27
PTPN22-202ENST00000420377 DAXXQ9UER7 740 aaPredicted RBP7.07□□□□□ -1.28
PTPN22-202ENST00000420377 FANCD2Q9BXW9 1451 aa7.07□□□□□ -1.28
PTPN22-202ENST00000420377 TRIM41Q8WV44 630 aa7.05□□□□□ -1.28
PTPN22-202ENST00000420377 CLASP1Q7Z460 1538 aa7.04□□□□□ -1.28
PTPN22-202ENST00000420377 SCAF1Q9H7N4 1312 aaKnown RBP7.03□□□□□ -1.28
PTPN22-202ENST00000420377 FOXD4L1Q9NU39 408 aa7.02□□□□□ -1.29
PTPN22-202ENST00000420377 SYNJ1O43426 1573 aa7.01□□□□□ -1.29
PTPN22-202ENST00000420377 DNMBPQ6XZF7 1577 aa7□□□□□ -1.29
PTPN22-202ENST00000420377 URB2Q14146 1524 aaKnown RBP7□□□□□ -1.29
PTPN22-202ENST00000420377 TOP2AP11388 1531 aaKnown RBP6.99□□□□□ -1.29
PTPN22-202ENST00000420377 ARAP1Q96P48 1450 aa6.99□□□□□ -1.29
PTPN22-202ENST00000420377 MAGI1Q96QZ7 1491 aaPredicted RBP6.99□□□□□ -1.29
PTPN22-202ENST00000420377 MROH2BQ7Z745 1585 aa6.97□□□□□ -1.29
PTPN22-202ENST00000420377 TARBP1Q13395 1621 aaKnown RBP6.97□□□□□ -1.29
PTPN22-202ENST00000420377 RTN4Q9NQC3 1192 aaKnown RBP6.96□□□□□ -1.29
PTPN22-202ENST00000420377 EIF4G3O43432 1585 aaKnown RBP6.95□□□□□ -1.3
PTPN22-202ENST00000420377 ERCC6L2Q5T890 1561 aa6.94□□□□□ -1.3
PTPN22-202ENST00000420377 CHD1O14646 1710 aa6.93□□□□□ -1.3
PTPN22-202ENST00000420377 TOPBP1Q92547 1522 aa6.92□□□□□ -1.3
PTPN22-202ENST00000420377 MSH5O43196 834 aa6.92□□□□□ -1.3
PTPN22-202ENST00000420377 SHROOM2Q13796 1616 aa6.89□□□□□ -1.31
PTPN22-202ENST00000420377 MAPKBP1O60336 1514 aa6.88□□□□□ -1.31
PTPN22-202ENST00000420377 SYNJ2O15056 1496 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 291.9 ms