RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 CHIC1Q5VXU3 224 aa10.13□□□□□ -0.79
PTPN22-202ENST00000420377 AEBP2Q6ZN18 517 aaPredicted RBP10.13□□□□□ -0.79
PTPN22-202ENST00000420377 POTEDQ86YR6 584 aa9.59□□□□□ -0.87
PTPN22-202ENST00000420377 NISCHQ9Y2I1 1504 aa9.31□□□□□ -0.92
PTPN22-202ENST00000420377 PHF23Q9BUL5 403 aaPredicted RBP9.07□□□□□ -0.96
PTPN22-202ENST00000420377 CCDC180Q9P1Z9 1646 aa8.84□□□□□ -0.99
PTPN22-202ENST00000420377 SHROOM4Q9ULL8 1493 aa8.48□□□□□ -1.05
PTPN22-202ENST00000420377 ABCC9O60706 1549 aa8.44□□□□□ -1.06
PTPN22-202ENST00000420377 MYO15BQ96JP2 1530 aa8.41□□□□□ -1.06
PTPN22-202ENST00000420377 RB1CC1Q8TDY2 1594 aa8.4□□□□□ -1.07
PTPN22-202ENST00000420377 PLPPR3Q6T4P5 718 aa8.39□□□□□ -1.07
PTPN22-202ENST00000420377 SENP3Q9H4L4 574 aaPredicted RBP8.37□□□□□ -1.07
PTPN22-202ENST00000420377 NACADO15069 1562 aa8.36□□□□□ -1.07
PTPN22-202ENST00000420377 DNAJC5BQ9UF47 199 aa8.09□□□□□ -1.11
PTPN22-202ENST00000420377 DCAF1Q9Y4B6 1507 aa8.07□□□□□ -1.12
PTPN22-202ENST00000420377 DNAJC5Q9H3Z4 198 aa8.06□□□□□ -1.12
PTPN22-202ENST00000420377 ADRA2BP18089 450 aa8.05□□□□□ -1.12
PTPN22-202ENST00000420377 BICRAQ9NZM4 1560 aa8□□□□□ -1.13
PTPN22-202ENST00000420377 UNC13AQ9UPW8 1703 aa7.99□□□□□ -1.13
PTPN22-202ENST00000420377 CUX2O14529 1486 aa7.99□□□□□ -1.13
PTPN22-202ENST00000420377 EHMT2Q96KQ7 1210 aa7.94□□□□□ -1.14
PTPN22-202ENST00000420377 PPP6R1Q9UPN7 881 aa7.93□□□□□ -1.14
PTPN22-202ENST00000420377 KCNA4P22459 653 aa7.89□□□□□ -1.15
PTPN22-202ENST00000420377 CECR2Q9BXF3 1484 aa7.85□□□□□ -1.15
PTPN22-202ENST00000420377 CC2D2AQ9P2K1 1620 aa7.85□□□□□ -1.15
PTPN22-202ENST00000420377 FOXD1Q16676 465 aa7.83□□□□□ -1.16
PTPN22-202ENST00000420377 EIF4G1Q04637 1599 aaKnown RBP7.82□□□□□ -1.16
PTPN22-202ENST00000420377 ZCCHC6Q5VYS8 1495 aaKnown RBP7.67□□□□□ -1.18
PTPN22-202ENST00000420377 NCAPD3P42695 1498 aa7.64□□□□□ -1.19
PTPN22-202ENST00000420377 MYT1Q01538 1121 aa7.64□□□□□ -1.19
PTPN22-202ENST00000420377 HMGXB3Q12766 1538 aa7.62□□□□□ -1.19
PTPN22-202ENST00000420377 PELP1Q8IZL8 1130 aaKnown RBP7.61□□□□□ -1.19
PTPN22-202ENST00000420377 PABPN1Q86U42 306 aaKnown RBP eCLIP7.59□□□□□ -1.19
PTPN22-202ENST00000420377 SMARCA2P51531 1590 aa7.57□□□□□ -1.2
PTPN22-202ENST00000420377 LAMC3Q9Y6N6 1575 aa7.55□□□□□ -1.2
PTPN22-202ENST00000420377 PEG3Q9GZU2 1588 aa7.52□□□□□ -1.21
PTPN22-202ENST00000420377 CSRNP3Q8WYN3 585 aa7.52□□□□□ -1.21
PTPN22-202ENST00000420377 PIAS4Q8N2W9 510 aaPredicted RBP7.51□□□□□ -1.21
PTPN22-202ENST00000420377 SLC4A1APQ9BWU0 796 aaKnown RBP7.5□□□□□ -1.21
PTPN22-202ENST00000420377 THOC2Q8NI27 1593 aaKnown RBP7.5□□□□□ -1.21
PTPN22-202ENST00000420377 PPP4R3CPQ6ZMV5 832 aa7.5□□□□□ -1.21
PTPN22-202ENST00000420377 TTBK1Q5TCY1 1321 aaPredicted RBP7.49□□□□□ -1.21
PTPN22-202ENST00000420377 SCRIBQ14160 1630 aa7.47□□□□□ -1.21
PTPN22-202ENST00000420377 SLC24A1O60721 1099 aa7.47□□□□□ -1.21
PTPN22-202ENST00000420377 ERCC6Q03468 1493 aa7.45□□□□□ -1.22
PTPN22-202ENST00000420377 PDS5BQ9NTI5 1447 aa7.41□□□□□ -1.22
PTPN22-202ENST00000420377 WDR62O43379 1518 aa7.4□□□□□ -1.22
PTPN22-202ENST00000420377 ATAD2BQ9ULI0 1458 aa7.39□□□□□ -1.23
PTPN22-202ENST00000420377 NPM3O75607 178 aaKnown RBP7.35□□□□□ -1.23
PTPN22-202ENST00000420377 WDR97A6NE52 1622 aa7.34□□□□□ -1.23
PTPN22-202ENST00000420377 MRC2Q9UBG0 1479 aa7.34□□□□□ -1.23
PTPN22-202ENST00000420377 BAZ1AQ9NRL2 1556 aaPredicted RBP7.32□□□□□ -1.24
PTPN22-202ENST00000420377 SMARCA4P51532 1647 aa7.32□□□□□ -1.24
PTPN22-202ENST00000420377 NCBP3Q53F19 620 aaKnown RBP7.3□□□□□ -1.24
PTPN22-202ENST00000420377 ZBTB22O15209 634 aa7.29□□□□□ -1.24
PTPN22-202ENST00000420377 BAZ1BQ9UIG0 1483 aaKnown RBP7.29□□□□□ -1.24
PTPN22-202ENST00000420377 RSF1Q96T23 1441 aaPredicted RBP7.25□□□□□ -1.25
PTPN22-202ENST00000420377 ABCC8Q09428 1581 aa7.25□□□□□ -1.25
PTPN22-202ENST00000420377 CADPSQ9ULU8 1353 aa7.23□□□□□ -1.25
PTPN22-202ENST00000420377 KIF21AQ7Z4S6 1674 aa7.23□□□□□ -1.25
PTPN22-202ENST00000420377 OSCARQ8IYS5 282 aa7.22□□□□□ -1.25
PTPN22-202ENST00000420377 PRDM2Q13029 1718 aa7.22□□□□□ -1.25
PTPN22-202ENST00000420377 DCAF8L2P0C7V8 631 aa7.2□□□□□ -1.26
PTPN22-202ENST00000420377 POTEHQ6S545 545 aa7.2□□□□□ -1.26
PTPN22-202ENST00000420377 RIMBP3CA6NJZ7 1639 aa7.19□□□□□ -1.26
PTPN22-202ENST00000420377 RIMBP3BA6NNM3 1639 aa7.19□□□□□ -1.26
PTPN22-202ENST00000420377 RIMBP3Q9UFD9 1639 aa7.19□□□□□ -1.26
PTPN22-202ENST00000420377 IFT140Q96RY7 1462 aa7.17□□□□□ -1.26
PTPN22-202ENST00000420377 CEP164Q9UPV0 1460 aa7.17□□□□□ -1.26
PTPN22-202ENST00000420377 APLP2Q06481 763 aa7.15□□□□□ -1.26
PTPN22-202ENST00000420377 CFTRP13569 1480 aa7.14□□□□□ -1.27
PTPN22-202ENST00000420377 PRKCSHP14314 528 aaPredicted RBP7.14□□□□□ -1.27
PTPN22-202ENST00000420377 NESP48681 1621 aa7.13□□□□□ -1.27
PTPN22-202ENST00000420377 ERICH6Q7L0X2 663 aa7.13□□□□□ -1.27
PTPN22-202ENST00000420377 CNKSR2Q8WXI2 1034 aa7.13□□□□□ -1.27
PTPN22-202ENST00000420377 MAPK8IP2Q13387 824 aaPredicted RBP7.12□□□□□ -1.27
PTPN22-202ENST00000420377 ARHGEF11O15085 1522 aa7.11□□□□□ -1.27
PTPN22-202ENST00000420377 DAXXQ9UER7 740 aaPredicted RBP7.07□□□□□ -1.28
PTPN22-202ENST00000420377 FANCD2Q9BXW9 1451 aa7.07□□□□□ -1.28
PTPN22-202ENST00000420377 TRIM41Q8WV44 630 aa7.05□□□□□ -1.28
PTPN22-202ENST00000420377 CLASP1Q7Z460 1538 aa7.04□□□□□ -1.28
PTPN22-202ENST00000420377 SCAF1Q9H7N4 1312 aaKnown RBP7.03□□□□□ -1.28
PTPN22-202ENST00000420377 FOXD4L1Q9NU39 408 aa7.02□□□□□ -1.29
PTPN22-202ENST00000420377 SYNJ1O43426 1573 aa7.01□□□□□ -1.29
PTPN22-202ENST00000420377 DNMBPQ6XZF7 1577 aa7□□□□□ -1.29
PTPN22-202ENST00000420377 URB2Q14146 1524 aaKnown RBP7□□□□□ -1.29
PTPN22-202ENST00000420377 TOP2AP11388 1531 aaKnown RBP6.99□□□□□ -1.29
PTPN22-202ENST00000420377 ARAP1Q96P48 1450 aa6.99□□□□□ -1.29
PTPN22-202ENST00000420377 MAGI1Q96QZ7 1491 aaPredicted RBP6.99□□□□□ -1.29
PTPN22-202ENST00000420377 MROH2BQ7Z745 1585 aa6.97□□□□□ -1.29
PTPN22-202ENST00000420377 TARBP1Q13395 1621 aaKnown RBP6.97□□□□□ -1.29
PTPN22-202ENST00000420377 RTN4Q9NQC3 1192 aaKnown RBP6.96□□□□□ -1.29
PTPN22-202ENST00000420377 EIF4G3O43432 1585 aaKnown RBP6.95□□□□□ -1.3
PTPN22-202ENST00000420377 ERCC6L2Q5T890 1561 aa6.94□□□□□ -1.3
PTPN22-202ENST00000420377 CHD1O14646 1710 aa6.93□□□□□ -1.3
PTPN22-202ENST00000420377 TOPBP1Q92547 1522 aa6.92□□□□□ -1.3
PTPN22-202ENST00000420377 MSH5O43196 834 aa6.92□□□□□ -1.3
PTPN22-202ENST00000420377 SHROOM2Q13796 1616 aa6.89□□□□□ -1.31
PTPN22-202ENST00000420377 MAPKBP1O60336 1514 aa6.88□□□□□ -1.31
PTPN22-202ENST00000420377 SYNJ2O15056 1496 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms