RNA–Protein interactions for RNA: ENST00000419986.1

VIL1-203, Transcript of villin 1, humanhuman

TSL 3

Gene VIL1, Length 639 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-203ENST00000419986 NISCHQ9Y2I1 1504 aa30.06■■■□□ 2.4
VIL1-203ENST00000419986 CCDC180Q9P1Z9 1646 aa26.61■■□□□ 1.85
VIL1-203ENST00000419986 ABCC9O60706 1549 aa25.87■■□□□ 1.73
VIL1-203ENST00000419986 ZCCHC6Q5VYS8 1495 aaKnown RBP25.09■■□□□ 1.61
VIL1-203ENST00000419986 NACADO15069 1562 aa24.97■■□□□ 1.59
VIL1-203ENST00000419986 RB1CC1Q8TDY2 1594 aa24.94■■□□□ 1.58
VIL1-203ENST00000419986 DCAF8L2P0C7V8 631 aa24.94■■□□□ 1.58
VIL1-203ENST00000419986 MYO15BQ96JP2 1530 aa24.91■■□□□ 1.58
VIL1-203ENST00000419986 DCAF1Q9Y4B6 1507 aa24.88■■□□□ 1.57
VIL1-203ENST00000419986 UNC13AQ9UPW8 1703 aa24.43■■□□□ 1.5
VIL1-203ENST00000419986 SCRIBQ14160 1630 aa24.29■■□□□ 1.48
VIL1-203ENST00000419986 BICRAQ9NZM4 1560 aa24.27■■□□□ 1.48
VIL1-203ENST00000419986 PABPN1Q86U42 306 aaKnown RBP eCLIP24.21■■□□□ 1.477e-7■■□□□ 12.4
VIL1-203ENST00000419986 SHROOM4Q9ULL8 1493 aa23.95■■□□□ 1.42
VIL1-203ENST00000419986 DNAJC5BQ9UF47 199 aa23.66■■□□□ 1.38
VIL1-203ENST00000419986 EIF4G1Q04637 1599 aaKnown RBP23.56■■□□□ 1.36
VIL1-203ENST00000419986 CECR2Q9BXF3 1484 aa23.43■■□□□ 1.34
VIL1-203ENST00000419986 CC2D2AQ9P2K1 1620 aa23.42■■□□□ 1.34
VIL1-203ENST00000419986 SMARCA4P51532 1647 aa23.27■■□□□ 1.32
VIL1-203ENST00000419986 BAZ1AQ9NRL2 1556 aaPredicted RBP23.25■■□□□ 1.31
VIL1-203ENST00000419986 MROH2BQ7Z745 1585 aa23.18■■□□□ 1.3
VIL1-203ENST00000419986 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
VIL1-203ENST00000419986 NCAPD3P42695 1498 aa23.07■■□□□ 1.28
VIL1-203ENST00000419986 PEG3Q9GZU2 1588 aa23.06■■□□□ 1.28
VIL1-203ENST00000419986 SMARCA2P51531 1590 aa23.06■■□□□ 1.28
VIL1-203ENST00000419986 RSF1Q96T23 1441 aaPredicted RBP22.98■■□□□ 1.27
VIL1-203ENST00000419986 HMGXB3Q12766 1538 aa22.96■■□□□ 1.27
VIL1-203ENST00000419986 WIZO95785 1651 aa22.93■■□□□ 1.26
VIL1-203ENST00000419986 BAZ1BQ9UIG0 1483 aaKnown RBP22.89■■□□□ 1.25
VIL1-203ENST00000419986 TOP2AP11388 1531 aaKnown RBP22.67■■□□□ 1.22
VIL1-203ENST00000419986 NESP48681 1621 aa22.47■■□□□ 1.19
VIL1-203ENST00000419986 SUPT5HO00267 1087 aaKnown RBP22.46■■□□□ 1.19
VIL1-203ENST00000419986 CCDC88BA6NC98 1476 aa22.43■■□□□ 1.18
VIL1-203ENST00000419986 LAMC3Q9Y6N6 1575 aa22.4■■□□□ 1.18
VIL1-203ENST00000419986 CADPSQ9ULU8 1353 aa22.39■■□□□ 1.18
VIL1-203ENST00000419986 CFTRP13569 1480 aa22.32■■□□□ 1.16
VIL1-203ENST00000419986 PDS5BQ9NTI5 1447 aa22.23■■□□□ 1.15
VIL1-203ENST00000419986 ERCC6Q03468 1493 aa22.22■■□□□ 1.15
VIL1-203ENST00000419986 KIF21AQ7Z4S6 1674 aa22.18■■□□□ 1.14
VIL1-203ENST00000419986 FANCD2Q9BXW9 1451 aa22.13■■□□□ 1.13
VIL1-203ENST00000419986 PRDM2Q13029 1718 aa22.12■■□□□ 1.13
VIL1-203ENST00000419986 THOC2Q8NI27 1593 aaKnown RBP22.09■■□□□ 1.13
VIL1-203ENST00000419986 CEP164Q9UPV0 1460 aa22.06■■□□□ 1.12
VIL1-203ENST00000419986 MRC2Q9UBG0 1479 aa22.01■■□□□ 1.11
VIL1-203ENST00000419986 CUX2O14529 1486 aa21.96■■□□□ 1.11
VIL1-203ENST00000419986 WDR62O43379 1518 aa21.95■■□□□ 1.1
VIL1-203ENST00000419986 URB2Q14146 1524 aaKnown RBP21.93■■□□□ 1.1
VIL1-203ENST00000419986 TOPBP1Q92547 1522 aa21.81■■□□□ 1.08
VIL1-203ENST00000419986 DNMBPQ6XZF7 1577 aa21.78■■□□□ 1.08
VIL1-203ENST00000419986 ABCC8Q09428 1581 aa21.77■■□□□ 1.08
VIL1-203ENST00000419986 CUX1P39880 1505 aa21.74■■□□□ 1.07
VIL1-203ENST00000419986 POLA1P09884 1462 aaPredicted RBP21.64■■□□□ 1.05
VIL1-203ENST00000419986 WRNQ14191 1432 aaPredicted RBP eCLIP21.62■■□□□ 1.05
VIL1-203ENST00000419986 FGD5Q6ZNL6 1462 aa21.6■■□□□ 1.05
VIL1-203ENST00000419986 IFT140Q96RY7 1462 aa21.59■■□□□ 1.05
VIL1-203ENST00000419986 SYNJ1O43426 1573 aa21.59■■□□□ 1.05
VIL1-203ENST00000419986 TARBP1Q13395 1621 aaKnown RBP21.58■■□□□ 1.04
VIL1-203ENST00000419986 TOP2BQ02880 1626 aa21.57■■□□□ 1.04
VIL1-203ENST00000419986 BIVM-ERCC5R4GMW8 1640 aa21.57■■□□□ 1.04
VIL1-203ENST00000419986 RAD54L2Q9Y4B4 1467 aa21.55■■□□□ 1.04
VIL1-203ENST00000419986 ZNF608Q9ULD9 1512 aaPredicted RBP21.53■■□□□ 1.04
VIL1-203ENST00000419986 SOGA1O94964 1423 aa21.53■■□□□ 1.04
VIL1-203ENST00000419986 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
VIL1-203ENST00000419986 EIF4G3O43432 1585 aaKnown RBP21.43■■□□□ 1.02
VIL1-203ENST00000419986 AQRO60306 1485 aaKnown RBP eCLIP21.42■■□□□ 1.027e-8■■■□□ 17
VIL1-203ENST00000419986 ABCA10Q8WWZ4 1543 aa21.41■■□□□ 1.02
VIL1-203ENST00000419986 TDRD9Q8NDG6 1382 aaKnown RBP21.4■■□□□ 1.02
VIL1-203ENST00000419986 ABCA5Q8WWZ7 1642 aa21.32■■□□□ 1
VIL1-203ENST00000419986 GAPVD1Q14C86 1478 aa21.29■■□□□ 1
VIL1-203ENST00000419986 GRIN2BQ13224 1484 aa21.26■□□□□ 0.99
VIL1-203ENST00000419986 PBRM1Q86U86 1689 aa21.22■□□□□ 0.99
VIL1-203ENST00000419986 SNAPC4Q5SXM2 1469 aa21.21■□□□□ 0.99
VIL1-203ENST00000419986 TRIM41Q8WV44 630 aa21.19■□□□□ 0.98
VIL1-203ENST00000419986 MAGI1Q96QZ7 1491 aaPredicted RBP21.18■□□□□ 0.98
VIL1-203ENST00000419986 ERICH3Q5RHP9 1530 aa21.14■□□□□ 0.98
VIL1-203ENST00000419986 KIF27Q86VH2 1401 aa21.13■□□□□ 0.97
VIL1-203ENST00000419986 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
VIL1-203ENST00000419986 CHD1O14646 1710 aa21.12■□□□□ 0.97
VIL1-203ENST00000419986 DNAJC5Q9H3Z4 198 aa21.11■□□□□ 0.97
VIL1-203ENST00000419986 SYNJ2O15056 1496 aa21.1■□□□□ 0.97
VIL1-203ENST00000419986 ADAMTS12P58397 1594 aa21.09■□□□□ 0.97
VIL1-203ENST00000419986 IGF1RP08069 1367 aa21.09■□□□□ 0.97
VIL1-203ENST00000419986 RUSC2Q8N2Y8 1516 aa21.08■□□□□ 0.96
VIL1-203ENST00000419986 OSCARQ8IYS5 282 aa21.07■□□□□ 0.96
VIL1-203ENST00000419986 FBLN2P98095 1184 aa21.05■□□□□ 0.96
VIL1-203ENST00000419986 FHAD1B1AJZ9 1412 aa21.04■□□□□ 0.96
VIL1-203ENST00000419986 CHMP7Q8WUX9 453 aaPredicted RBP21.03■□□□□ 0.96
VIL1-203ENST00000419986 GRIN2AQ12879 1464 aa21■□□□□ 0.95
VIL1-203ENST00000419986 CUL7Q14999 1698 aa20.96■□□□□ 0.95
VIL1-203ENST00000419986 CARMIL1Q5VZK9 1371 aa20.93■□□□□ 0.94
VIL1-203ENST00000419986 CLASP1Q7Z460 1538 aa20.93■□□□□ 0.94
VIL1-203ENST00000419986 NUP160Q12769 1436 aa20.92■□□□□ 0.94
VIL1-203ENST00000419986 CEP170Q5SW79 1584 aa20.9■□□□□ 0.94
VIL1-203ENST00000419986 EEA1Q15075 1411 aa20.85■□□□□ 0.93
VIL1-203ENST00000419986 PRXQ9BXM0 1461 aa20.83■□□□□ 0.93
VIL1-203ENST00000419986 RAPGEF2Q9Y4G8 1499 aa20.81■□□□□ 0.92
VIL1-203ENST00000419986 CSRNP3Q8WYN3 585 aa20.81■□□□□ 0.92
VIL1-203ENST00000419986 ARHGEF11O15085 1522 aa20.77■□□□□ 0.92
VIL1-203ENST00000419986 FAM9AQ8IZU1 332 aaPredicted RBP20.76■□□□□ 0.91
VIL1-203ENST00000419986 RIMBP3CA6NJZ7 1639 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms