RNA–Protein interactions for RNA: ENST00000419940.5

TGFA-204, Transcript of transforming growth factor alpha, humanhuman

TSL 5

Gene TGFA, Length 681 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-204ENST00000419940 NISCHQ9Y2I1 1504 aa30.88■■■□□ 2.53
TGFA-204ENST00000419940 CCDC180Q9P1Z9 1646 aa27.26■■□□□ 1.95
TGFA-204ENST00000419940 ABCC9O60706 1549 aa26.48■■□□□ 1.83
TGFA-204ENST00000419940 DCAF8L2P0C7V8 631 aa25.8■■□□□ 1.72
TGFA-204ENST00000419940 ZCCHC6Q5VYS8 1495 aaKnown RBP25.76■■□□□ 1.71
TGFA-204ENST00000419940 NACADO15069 1562 aa25.57■■□□□ 1.68
TGFA-204ENST00000419940 RB1CC1Q8TDY2 1594 aa25.53■■□□□ 1.68
TGFA-204ENST00000419940 DCAF1Q9Y4B6 1507 aa25.52■■□□□ 1.68
TGFA-204ENST00000419940 MYO15BQ96JP2 1530 aa25.49■■□□□ 1.67
TGFA-204ENST00000419940 UNC13AQ9UPW8 1703 aa25■■□□□ 1.59
TGFA-204ENST00000419940 SCRIBQ14160 1630 aa24.97■■□□□ 1.59
TGFA-204ENST00000419940 PABPN1Q86U42 306 aaKnown RBP eCLIP24.85■■□□□ 1.57
TGFA-204ENST00000419940 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
TGFA-204ENST00000419940 SHROOM4Q9ULL8 1493 aa24.68■■□□□ 1.54
TGFA-204ENST00000419940 DNAJC5BQ9UF47 199 aa24.11■■□□□ 1.45
TGFA-204ENST00000419940 EIF4G1Q04637 1599 aaKnown RBP24.09■■□□□ 1.45
TGFA-204ENST00000419940 CECR2Q9BXF3 1484 aa24.08■■□□□ 1.45
TGFA-204ENST00000419940 CC2D2AQ9P2K1 1620 aa23.94■■□□□ 1.42
TGFA-204ENST00000419940 BAZ1AQ9NRL2 1556 aaPredicted RBP23.89■■□□□ 1.41
TGFA-204ENST00000419940 SMARCA4P51532 1647 aa23.88■■□□□ 1.41
TGFA-204ENST00000419940 MROH2BQ7Z745 1585 aa23.84■■□□□ 1.41
TGFA-204ENST00000419940 ATAD2BQ9ULI0 1458 aa23.69■■□□□ 1.38
TGFA-204ENST00000419940 RSF1Q96T23 1441 aaPredicted RBP23.67■■□□□ 1.38
TGFA-204ENST00000419940 SMARCA2P51531 1590 aa23.64■■□□□ 1.37
TGFA-204ENST00000419940 NCAPD3P42695 1498 aa23.62■■□□□ 1.37
TGFA-204ENST00000419940 PEG3Q9GZU2 1588 aa23.61■■□□□ 1.37
TGFA-204ENST00000419940 WIZO95785 1651 aa23.6■■□□□ 1.37
TGFA-204ENST00000419940 BAZ1BQ9UIG0 1483 aaKnown RBP23.5■■□□□ 1.35
TGFA-204ENST00000419940 HMGXB3Q12766 1538 aa23.49■■□□□ 1.35
TGFA-204ENST00000419940 SUPT5HO00267 1087 aaKnown RBP23.39■■□□□ 1.33
TGFA-204ENST00000419940 TOP2AP11388 1531 aaKnown RBP23.31■■□□□ 1.32
TGFA-204ENST00000419940 CCDC88BA6NC98 1476 aa23.1■■□□□ 1.29
TGFA-204ENST00000419940 NESP48681 1621 aa23.03■■□□□ 1.28
TGFA-204ENST00000419940 CADPSQ9ULU8 1353 aa22.98■■□□□ 1.27
TGFA-204ENST00000419940 LAMC3Q9Y6N6 1575 aa22.93■■□□□ 1.26
TGFA-204ENST00000419940 CFTRP13569 1480 aa22.88■■□□□ 1.25
TGFA-204ENST00000419940 PDS5BQ9NTI5 1447 aa22.77■■□□□ 1.24
TGFA-204ENST00000419940 ERCC6Q03468 1493 aa22.75■■□□□ 1.23
TGFA-204ENST00000419940 KIF21AQ7Z4S6 1674 aa22.72■■□□□ 1.23
TGFA-204ENST00000419940 FANCD2Q9BXW9 1451 aa22.7■■□□□ 1.22
TGFA-204ENST00000419940 PRDM2Q13029 1718 aa22.69■■□□□ 1.22
TGFA-204ENST00000419940 CEP164Q9UPV0 1460 aa22.61■■□□□ 1.21
TGFA-204ENST00000419940 THOC2Q8NI27 1593 aaKnown RBP22.54■■□□□ 1.2
TGFA-204ENST00000419940 MRC2Q9UBG0 1479 aa22.53■■□□□ 1.2
TGFA-204ENST00000419940 URB2Q14146 1524 aaKnown RBP22.47■■□□□ 1.19
TGFA-204ENST00000419940 WDR62O43379 1518 aa22.43■■□□□ 1.18
TGFA-204ENST00000419940 TOPBP1Q92547 1522 aa22.37■■□□□ 1.17
TGFA-204ENST00000419940 CUX2O14529 1486 aa22.37■■□□□ 1.17
TGFA-204ENST00000419940 ABCC8Q09428 1581 aa22.35■■□□□ 1.17
TGFA-204ENST00000419940 DNMBPQ6XZF7 1577 aa22.34■■□□□ 1.17
TGFA-204ENST00000419940 CUX1P39880 1505 aa22.33■■□□□ 1.17
TGFA-204ENST00000419940 WRNQ14191 1432 aaPredicted RBP eCLIP22.3■■□□□ 1.16
TGFA-204ENST00000419940 SYNJ1O43426 1573 aa22.23■■□□□ 1.15
TGFA-204ENST00000419940 POLA1P09884 1462 aaPredicted RBP22.2■■□□□ 1.14
TGFA-204ENST00000419940 FGD5Q6ZNL6 1462 aa22.2■■□□□ 1.14
TGFA-204ENST00000419940 TOP2BQ02880 1626 aa22.2■■□□□ 1.14
TGFA-204ENST00000419940 BIVM-ERCC5R4GMW8 1640 aa22.18■■□□□ 1.14
TGFA-204ENST00000419940 RAD54L2Q9Y4B4 1467 aa22.15■■□□□ 1.14
TGFA-204ENST00000419940 SOGA1O94964 1423 aa22.14■■□□□ 1.14
TGFA-204ENST00000419940 IFT140Q96RY7 1462 aa22.13■■□□□ 1.13
TGFA-204ENST00000419940 TARBP1Q13395 1621 aaKnown RBP22.1■■□□□ 1.13
TGFA-204ENST00000419940 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
TGFA-204ENST00000419940 TRIM41Q8WV44 630 aa22.03■■□□□ 1.12
TGFA-204ENST00000419940 TDRD9Q8NDG6 1382 aaKnown RBP22.01■■□□□ 1.11
TGFA-204ENST00000419940 CHIC1Q5VXU3 224 aa22■■□□□ 1.11
TGFA-204ENST00000419940 AQRO60306 1485 aaKnown RBP eCLIP21.99■■□□□ 1.11
TGFA-204ENST00000419940 ABCA10Q8WWZ4 1543 aa21.98■■□□□ 1.11
TGFA-204ENST00000419940 WDR97A6NE52 1622 aa21.97■■□□□ 1.11
TGFA-204ENST00000419940 EIF4G3O43432 1585 aaKnown RBP21.93■■□□□ 1.1
TGFA-204ENST00000419940 GAPVD1Q14C86 1478 aa21.87■■□□□ 1.09
TGFA-204ENST00000419940 ABCA5Q8WWZ7 1642 aa21.85■■□□□ 1.09
TGFA-204ENST00000419940 GRIN2BQ13224 1484 aa21.81■■□□□ 1.08
TGFA-204ENST00000419940 KIF27Q86VH2 1401 aa21.79■■□□□ 1.08
TGFA-204ENST00000419940 PBRM1Q86U86 1689 aa21.79■■□□□ 1.08
TGFA-204ENST00000419940 RUSC2Q8N2Y8 1516 aa21.78■■□□□ 1.08
TGFA-204ENST00000419940 SNAPC4Q5SXM2 1469 aa21.75■■□□□ 1.07
TGFA-204ENST00000419940 IGF1RP08069 1367 aa21.72■■□□□ 1.07
TGFA-204ENST00000419940 ERICH3Q5RHP9 1530 aa21.7■■□□□ 1.07
TGFA-204ENST00000419940 FBLN2P98095 1184 aa21.69■■□□□ 1.06
TGFA-204ENST00000419940 MAGI1Q96QZ7 1491 aaPredicted RBP21.69■■□□□ 1.06
TGFA-204ENST00000419940 CHMP7Q8WUX9 453 aaPredicted RBP21.65■■□□□ 1.06
TGFA-204ENST00000419940 FAM9AQ8IZU1 332 aaPredicted RBP21.63■■□□□ 1.05
TGFA-204ENST00000419940 SYNJ2O15056 1496 aa21.63■■□□□ 1.05
TGFA-204ENST00000419940 CHD1O14646 1710 aa21.63■■□□□ 1.05
TGFA-204ENST00000419940 FHAD1B1AJZ9 1412 aa21.62■■□□□ 1.05
TGFA-204ENST00000419940 ADAMTS12P58397 1594 aa21.61■■□□□ 1.05
TGFA-204ENST00000419940 OSCARQ8IYS5 282 aa21.59■■□□□ 1.05
TGFA-204ENST00000419940 CARMIL1Q5VZK9 1371 aa21.58■■□□□ 1.04
TGFA-204ENST00000419940 CSRNP3Q8WYN3 585 aa21.57■■□□□ 1.04
TGFA-204ENST00000419940 CUL7Q14999 1698 aa21.55■■□□□ 1.04
TGFA-204ENST00000419940 EEA1Q15075 1411 aa21.55■■□□□ 1.04
TGFA-204ENST00000419940 GRIN2AQ12879 1464 aa21.52■■□□□ 1.04
TGFA-204ENST00000419940 PRXQ9BXM0 1461 aa21.46■■□□□ 1.03
TGFA-204ENST00000419940 RAPGEF2Q9Y4G8 1499 aa21.46■■□□□ 1.03
TGFA-204ENST00000419940 CEP170Q5SW79 1584 aa21.43■■□□□ 1.02
TGFA-204ENST00000419940 NUP160Q12769 1436 aa21.42■■□□□ 1.02
TGFA-204ENST00000419940 DNAJC5Q9H3Z4 198 aa21.42■■□□□ 1.02
TGFA-204ENST00000419940 CLASP1Q7Z460 1538 aa21.37■■□□□ 1.01
TGFA-204ENST00000419940 EHMT2Q96KQ7 1210 aa21.36■■□□□ 1.01
TGFA-204ENST00000419940 KIF21BO75037 1637 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms