RNA–Protein interactions for RNA: ENST00000419531.2

LINC01135-201, Transcript of long intergenic non-protein coding RNA 1135, humanhuman

TSL 4 BASIC

Gene LINC01135, Length 996 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01135-201ENST00000419531 NISCHQ9Y2I1 1504 aa29.25■■■□□ 2.27
LINC01135-201ENST00000419531 CCDC180Q9P1Z9 1646 aa25.88■■□□□ 1.73
LINC01135-201ENST00000419531 ABCC9O60706 1549 aa25.17■■□□□ 1.62
LINC01135-201ENST00000419531 ZCCHC6Q5VYS8 1495 aaKnown RBP24.4■■□□□ 1.5
LINC01135-201ENST00000419531 DCAF8L2P0C7V8 631 aa24.4■■□□□ 1.5
LINC01135-201ENST00000419531 NACADO15069 1562 aa24.29■■□□□ 1.48
LINC01135-201ENST00000419531 RB1CC1Q8TDY2 1594 aa24.26■■□□□ 1.47
LINC01135-201ENST00000419531 MYO15BQ96JP2 1530 aa24.18■■□□□ 1.46
LINC01135-201ENST00000419531 DCAF1Q9Y4B6 1507 aa24.17■■□□□ 1.46
LINC01135-201ENST00000419531 UNC13AQ9UPW8 1703 aa23.76■■□□□ 1.39
LINC01135-201ENST00000419531 SCRIBQ14160 1630 aa23.68■■□□□ 1.38
LINC01135-201ENST00000419531 PABPN1Q86U42 306 aaKnown RBP eCLIP23.58■■□□□ 1.37
LINC01135-201ENST00000419531 BICRAQ9NZM4 1560 aa23.56■■□□□ 1.36
LINC01135-201ENST00000419531 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
LINC01135-201ENST00000419531 DNAJC5BQ9UF47 199 aa22.93■■□□□ 1.26
LINC01135-201ENST00000419531 EIF4G1Q04637 1599 aaKnown RBP22.89■■□□□ 1.26
LINC01135-201ENST00000419531 CECR2Q9BXF3 1484 aa22.79■■□□□ 1.24
LINC01135-201ENST00000419531 CC2D2AQ9P2K1 1620 aa22.76■■□□□ 1.23
LINC01135-201ENST00000419531 SMARCA4P51532 1647 aa22.65■■□□□ 1.22
LINC01135-201ENST00000419531 BAZ1AQ9NRL2 1556 aaPredicted RBP22.63■■□□□ 1.21
LINC01135-201ENST00000419531 MROH2BQ7Z745 1585 aa22.57■■□□□ 1.2
LINC01135-201ENST00000419531 ATAD2BQ9ULI0 1458 aa22.47■■□□□ 1.19
LINC01135-201ENST00000419531 SMARCA2P51531 1590 aa22.44■■□□□ 1.18
LINC01135-201ENST00000419531 NCAPD3P42695 1498 aa22.41■■□□□ 1.18
LINC01135-201ENST00000419531 PEG3Q9GZU2 1588 aa22.4■■□□□ 1.18
LINC01135-201ENST00000419531 RSF1Q96T23 1441 aaPredicted RBP22.38■■□□□ 1.17
LINC01135-201ENST00000419531 WIZO95785 1651 aa22.34■■□□□ 1.17
LINC01135-201ENST00000419531 HMGXB3Q12766 1538 aa22.31■■□□□ 1.16
LINC01135-201ENST00000419531 BAZ1BQ9UIG0 1483 aaKnown RBP22.29■■□□□ 1.16
LINC01135-201ENST00000419531 TOP2AP11388 1531 aaKnown RBP22.09■■□□□ 1.13
LINC01135-201ENST00000419531 SUPT5HO00267 1087 aaKnown RBP22.02■■□□□ 1.12
LINC01135-201ENST00000419531 NESP48681 1621 aa21.86■■□□□ 1.09
LINC01135-201ENST00000419531 CCDC88BA6NC98 1476 aa21.84■■□□□ 1.09
LINC01135-201ENST00000419531 LAMC3Q9Y6N6 1575 aa21.78■■□□□ 1.08
LINC01135-201ENST00000419531 CADPSQ9ULU8 1353 aa21.78■■□□□ 1.08
LINC01135-201ENST00000419531 CFTRP13569 1480 aa21.69■■□□□ 1.06
LINC01135-201ENST00000419531 ERCC6Q03468 1493 aa21.66■■□□□ 1.06
LINC01135-201ENST00000419531 PDS5BQ9NTI5 1447 aa21.63■■□□□ 1.05
LINC01135-201ENST00000419531 KIF21AQ7Z4S6 1674 aa21.6■■□□□ 1.05
LINC01135-201ENST00000419531 PRDM2Q13029 1718 aa21.55■■□□□ 1.04
LINC01135-201ENST00000419531 FANCD2Q9BXW9 1451 aa21.54■■□□□ 1.04
LINC01135-201ENST00000419531 CEP164Q9UPV0 1460 aa21.49■■□□□ 1.03
LINC01135-201ENST00000419531 THOC2Q8NI27 1593 aaKnown RBP21.44■■□□□ 1.02
LINC01135-201ENST00000419531 MRC2Q9UBG0 1479 aa21.41■■□□□ 1.02
LINC01135-201ENST00000419531 CUX2O14529 1486 aa21.32■■□□□ 1
LINC01135-201ENST00000419531 WDR62O43379 1518 aa21.32■■□□□ 1
LINC01135-201ENST00000419531 URB2Q14146 1524 aaKnown RBP21.32■■□□□ 1
LINC01135-201ENST00000419531 TOPBP1Q92547 1522 aa21.22■□□□□ 0.99
LINC01135-201ENST00000419531 DNMBPQ6XZF7 1577 aa21.2■□□□□ 0.98
LINC01135-201ENST00000419531 ABCC8Q09428 1581 aa21.19■□□□□ 0.98
LINC01135-201ENST00000419531 CUX1P39880 1505 aa21.15■□□□□ 0.98
LINC01135-201ENST00000419531 WRNQ14191 1432 aaPredicted RBP eCLIP21.09■□□□□ 0.97
LINC01135-201ENST00000419531 POLA1P09884 1462 aaPredicted RBP21.06■□□□□ 0.96
LINC01135-201ENST00000419531 FGD5Q6ZNL6 1462 aa21.04■□□□□ 0.96
LINC01135-201ENST00000419531 SYNJ1O43426 1573 aa21.03■□□□□ 0.96
LINC01135-201ENST00000419531 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
LINC01135-201ENST00000419531 TOP2BQ02880 1626 aa21.01■□□□□ 0.95
LINC01135-201ENST00000419531 BIVM-ERCC5R4GMW8 1640 aa21■□□□□ 0.95
LINC01135-201ENST00000419531 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
LINC01135-201ENST00000419531 SOGA1O94964 1423 aa20.98■□□□□ 0.95
LINC01135-201ENST00000419531 TARBP1Q13395 1621 aaKnown RBP20.97■□□□□ 0.95
LINC01135-201ENST00000419531 ZNF608Q9ULD9 1512 aaPredicted RBP20.94■□□□□ 0.94
LINC01135-201ENST00000419531 TDRD9Q8NDG6 1382 aaKnown RBP20.85■□□□□ 0.93
LINC01135-201ENST00000419531 AQRO60306 1485 aaKnown RBP eCLIP20.85■□□□□ 0.93
LINC01135-201ENST00000419531 WDR97A6NE52 1622 aa20.85■□□□□ 0.93
LINC01135-201ENST00000419531 EIF4G3O43432 1585 aaKnown RBP20.85■□□□□ 0.93
LINC01135-201ENST00000419531 ABCA10Q8WWZ4 1543 aa20.83■□□□□ 0.92
LINC01135-201ENST00000419531 TRIM41Q8WV44 630 aa20.75■□□□□ 0.91
LINC01135-201ENST00000419531 GAPVD1Q14C86 1478 aa20.74■□□□□ 0.91
LINC01135-201ENST00000419531 ABCA5Q8WWZ7 1642 aa20.73■□□□□ 0.91
LINC01135-201ENST00000419531 GRIN2BQ13224 1484 aa20.69■□□□□ 0.9
LINC01135-201ENST00000419531 PBRM1Q86U86 1689 aa20.68■□□□□ 0.9
LINC01135-201ENST00000419531 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
LINC01135-201ENST00000419531 SNAPC4Q5SXM2 1469 aa20.65■□□□□ 0.9
LINC01135-201ENST00000419531 KIF27Q86VH2 1401 aa20.62■□□□□ 0.89
LINC01135-201ENST00000419531 MAGI1Q96QZ7 1491 aaPredicted RBP20.61■□□□□ 0.89
LINC01135-201ENST00000419531 ERICH3Q5RHP9 1530 aa20.58■□□□□ 0.88
LINC01135-201ENST00000419531 FBLN2P98095 1184 aa20.57■□□□□ 0.88
LINC01135-201ENST00000419531 CHD1O14646 1710 aa20.56■□□□□ 0.88
LINC01135-201ENST00000419531 RUSC2Q8N2Y8 1516 aa20.55■□□□□ 0.88
LINC01135-201ENST00000419531 CHMP7Q8WUX9 453 aaPredicted RBP20.53■□□□□ 0.88
LINC01135-201ENST00000419531 IGF1RP08069 1367 aa20.53■□□□□ 0.88
LINC01135-201ENST00000419531 SYNJ2O15056 1496 aa20.53■□□□□ 0.88
LINC01135-201ENST00000419531 ADAMTS12P58397 1594 aa20.52■□□□□ 0.88
LINC01135-201ENST00000419531 OSCARQ8IYS5 282 aa20.51■□□□□ 0.87
LINC01135-201ENST00000419531 FHAD1B1AJZ9 1412 aa20.49■□□□□ 0.87
LINC01135-201ENST00000419531 DNAJC5Q9H3Z4 198 aa20.45■□□□□ 0.86
LINC01135-201ENST00000419531 GRIN2AQ12879 1464 aa20.43■□□□□ 0.86
LINC01135-201ENST00000419531 CUL7Q14999 1698 aa20.43■□□□□ 0.86
LINC01135-201ENST00000419531 CARMIL1Q5VZK9 1371 aa20.41■□□□□ 0.86
LINC01135-201ENST00000419531 FAM9AQ8IZU1 332 aaPredicted RBP20.37■□□□□ 0.85
LINC01135-201ENST00000419531 EEA1Q15075 1411 aa20.35■□□□□ 0.85
LINC01135-201ENST00000419531 CSRNP3Q8WYN3 585 aa20.33■□□□□ 0.85
LINC01135-201ENST00000419531 NUP160Q12769 1436 aa20.33■□□□□ 0.84
LINC01135-201ENST00000419531 CEP170Q5SW79 1584 aa20.33■□□□□ 0.84
LINC01135-201ENST00000419531 CLASP1Q7Z460 1538 aa20.32■□□□□ 0.84
LINC01135-201ENST00000419531 RAPGEF2Q9Y4G8 1499 aa20.3■□□□□ 0.84
LINC01135-201ENST00000419531 PRXQ9BXM0 1461 aa20.28■□□□□ 0.84
LINC01135-201ENST00000419531 KIAA0586Q9BVV6 1533 aa20.19■□□□□ 0.82
LINC01135-201ENST00000419531 ARHGEF11O15085 1522 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms