RNA–Protein interactions for RNA: ENST00000419241.1

ITSN1-214, Transcript of intersectin 1, humanhuman

TSL 5

Gene ITSN1, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-214ENST00000419241 NISCHQ9Y2I1 1504 aa18.76■□□□□ 0.59
ITSN1-214ENST00000419241 ABCC9O60706 1549 aa18.23■□□□□ 0.51
ITSN1-214ENST00000419241 DNAJC5BQ9UF47 199 aa17.98■□□□□ 0.47
ITSN1-214ENST00000419241 DNAJC5Q9H3Z4 198 aa17.2■□□□□ 0.34
ITSN1-214ENST00000419241 CCDC180Q9P1Z9 1646 aa17.18■□□□□ 0.34
ITSN1-214ENST00000419241 RB1CC1Q8TDY2 1594 aa16.87■□□□□ 0.29
ITSN1-214ENST00000419241 PABPN1Q86U42 306 aaKnown RBP eCLIP16.84■□□□□ 0.29
ITSN1-214ENST00000419241 NACADO15069 1562 aa16.52■□□□□ 0.24
ITSN1-214ENST00000419241 CECR2Q9BXF3 1484 aa16.52■□□□□ 0.23
ITSN1-214ENST00000419241 BICRAQ9NZM4 1560 aa16.43■□□□□ 0.22
ITSN1-214ENST00000419241 UNC13AQ9UPW8 1703 aa16.38■□□□□ 0.21
ITSN1-214ENST00000419241 CC2D2AQ9P2K1 1620 aa16.37■□□□□ 0.21
ITSN1-214ENST00000419241 DCAF8L2P0C7V8 631 aa16.29■□□□□ 0.2
ITSN1-214ENST00000419241 SHROOM4Q9ULL8 1493 aa16.1■□□□□ 0.17
ITSN1-214ENST00000419241 EIF4G1Q04637 1599 aaKnown RBP16.1■□□□□ 0.17
ITSN1-214ENST00000419241 CUX2O14529 1486 aa16.09■□□□□ 0.17
ITSN1-214ENST00000419241 TRIM41Q8WV44 630 aa16.06■□□□□ 0.16
ITSN1-214ENST00000419241 MYO15BQ96JP2 1530 aa15.98■□□□□ 0.15
ITSN1-214ENST00000419241 ERCC6Q03468 1493 aa15.8■□□□□ 0.12
ITSN1-214ENST00000419241 SCRIBQ14160 1630 aa15.68■□□□□ 0.1
ITSN1-214ENST00000419241 DCAF1Q9Y4B6 1507 aa15.42■□□□□ 0.06
ITSN1-214ENST00000419241 ZCCHC6Q5VYS8 1495 aaKnown RBP15.4■□□□□ 0.06
ITSN1-214ENST00000419241 NESP48681 1621 aa15.38■□□□□ 0.05
ITSN1-214ENST00000419241 THOC2Q8NI27 1593 aaKnown RBP15.37■□□□□ 0.05
ITSN1-214ENST00000419241 AEBP2Q6ZN18 517 aaPredicted RBP15.35■□□□□ 0.05
ITSN1-214ENST00000419241 NCAPD3P42695 1498 aa15.3■□□□□ 0.04
ITSN1-214ENST00000419241 SMARCA2P51531 1590 aa15.23■□□□□ 0.03
ITSN1-214ENST00000419241 OSCARQ8IYS5 282 aa15.21■□□□□ 0.03
ITSN1-214ENST00000419241 BAZ1AQ9NRL2 1556 aaPredicted RBP15.15■□□□□ 0.02
ITSN1-214ENST00000419241 ATAD2BQ9ULI0 1458 aa15.12■□□□□ 0.01
ITSN1-214ENST00000419241 HMGXB3Q12766 1538 aa15.07■□□□□ 0
ITSN1-214ENST00000419241 RIMBP3CA6NJZ7 1639 aa15.07■□□□□ 0
ITSN1-214ENST00000419241 RIMBP3BA6NNM3 1639 aa15.07■□□□□ 0
ITSN1-214ENST00000419241 RIMBP3Q9UFD9 1639 aa15.07■□□□□ 0
ITSN1-214ENST00000419241 TRHP20396 242 aaPredicted RBP15.07■□□□□ 0
ITSN1-214ENST00000419241 LAMC3Q9Y6N6 1575 aa15.07■□□□□ 0
ITSN1-214ENST00000419241 PDS5BQ9NTI5 1447 aa15.06■□□□□ 0
ITSN1-214ENST00000419241 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
ITSN1-214ENST00000419241 MRC2Q9UBG0 1479 aa14.98□□□□□ -0.01
ITSN1-214ENST00000419241 ARHGEF11O15085 1522 aa14.96□□□□□ -0.02
ITSN1-214ENST00000419241 WDR62O43379 1518 aa14.96□□□□□ -0.02
ITSN1-214ENST00000419241 CYB5RLQ6IPT4 315 aa14.93□□□□□ -0.02
ITSN1-214ENST00000419241 BAZ1BQ9UIG0 1483 aaKnown RBP14.91□□□□□ -0.02
ITSN1-214ENST00000419241 ILDR1Q86SU0 546 aaPredicted RBP14.89□□□□□ -0.03
ITSN1-214ENST00000419241 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
ITSN1-214ENST00000419241 CADPSQ9ULU8 1353 aa14.8□□□□□ -0.04
ITSN1-214ENST00000419241 ARAP1Q96P48 1450 aa14.76□□□□□ -0.05
ITSN1-214ENST00000419241 CEP164Q9UPV0 1460 aa14.72□□□□□ -0.05
ITSN1-214ENST00000419241 PEG3Q9GZU2 1588 aa14.68□□□□□ -0.06
ITSN1-214ENST00000419241 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
ITSN1-214ENST00000419241 URB2Q14146 1524 aaKnown RBP14.57□□□□□ -0.08
ITSN1-214ENST00000419241 RSF1Q96T23 1441 aaPredicted RBP14.57□□□□□ -0.08
ITSN1-214ENST00000419241 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
ITSN1-214ENST00000419241 IFT140Q96RY7 1462 aa14.47□□□□□ -0.09
ITSN1-214ENST00000419241 MROH2BQ7Z745 1585 aa14.46□□□□□ -0.09
ITSN1-214ENST00000419241 CFTRP13569 1480 aa14.42□□□□□ -0.1
ITSN1-214ENST00000419241 FBLN2P98095 1184 aa14.41□□□□□ -0.1
ITSN1-214ENST00000419241 CHD1O14646 1710 aa14.41□□□□□ -0.1
ITSN1-214ENST00000419241 EIF4G3O43432 1585 aaKnown RBP14.39□□□□□ -0.11
ITSN1-214ENST00000419241 KDM4FA0A1W2PPD8 638 aa14.34□□□□□ -0.11
ITSN1-214ENST00000419241 AQRO60306 1485 aaKnown RBP eCLIP14.31□□□□□ -0.12
ITSN1-214ENST00000419241 CLASP1Q7Z460 1538 aa14.29□□□□□ -0.12
ITSN1-214ENST00000419241 GAPVD1Q14C86 1478 aa14.24□□□□□ -0.13
ITSN1-214ENST00000419241 TOPBP1Q92547 1522 aa14.23□□□□□ -0.13
ITSN1-214ENST00000419241 WIZO95785 1651 aa14.19□□□□□ -0.14
ITSN1-214ENST00000419241 SYNJ1O43426 1573 aa14.17□□□□□ -0.14
ITSN1-214ENST00000419241 FBXO41Q8TF61 875 aa14.16□□□□□ -0.14
ITSN1-214ENST00000419241 TARBP1Q13395 1621 aaKnown RBP14.15□□□□□ -0.14
ITSN1-214ENST00000419241 CHMP7Q8WUX9 453 aaPredicted RBP14.14□□□□□ -0.15
ITSN1-214ENST00000419241 ERCC6L2Q5T890 1561 aa14.13□□□□□ -0.15
ITSN1-214ENST00000419241 SNAPC4Q5SXM2 1469 aa14.13□□□□□ -0.15
ITSN1-214ENST00000419241 ABCC8Q09428 1581 aa14.1□□□□□ -0.15
ITSN1-214ENST00000419241 LMTK3Q96Q04 1460 aa14.09□□□□□ -0.15
ITSN1-214ENST00000419241 HECW2Q9P2P5 1572 aa14.08□□□□□ -0.16
ITSN1-214ENST00000419241 TDRD9Q8NDG6 1382 aaKnown RBP14.08□□□□□ -0.16
ITSN1-214ENST00000419241 DNMBPQ6XZF7 1577 aa14.07□□□□□ -0.16
ITSN1-214ENST00000419241 KIF13AQ9H1H9 1805 aa14.06□□□□□ -0.16
ITSN1-214ENST00000419241 PRDM2Q13029 1718 aa14.04□□□□□ -0.16
ITSN1-214ENST00000419241 POLA1P09884 1462 aaPredicted RBP14.04□□□□□ -0.16
ITSN1-214ENST00000419241 MAGI1Q96QZ7 1491 aaPredicted RBP14.03□□□□□ -0.16
ITSN1-214ENST00000419241 RAD54L2Q9Y4B4 1467 aa14.01□□□□□ -0.17
ITSN1-214ENST00000419241 SOCS7O14512 581 aa14.01□□□□□ -0.17
ITSN1-214ENST00000419241 FAM69CQ0P6D2 419 aa14.01□□□□□ -0.17
ITSN1-214ENST00000419241 SYNJ2O15056 1496 aa14□□□□□ -0.17
ITSN1-214ENST00000419241 KDM6BO15054 1643 aa14□□□□□ -0.17
ITSN1-214ENST00000419241 ADGRL1O94910 1474 aa13.98□□□□□ -0.17
ITSN1-214ENST00000419241 TOP2AP11388 1531 aaKnown RBP13.97□□□□□ -0.17
ITSN1-214ENST00000419241 ABCC10Q5T3U5 1492 aa13.96□□□□□ -0.17
ITSN1-214ENST00000419241 SOGA1O94964 1423 aa13.96□□□□□ -0.18
ITSN1-214ENST00000419241 GRIN2BQ13224 1484 aa13.94□□□□□ -0.18
ITSN1-214ENST00000419241 SUPT5HO00267 1087 aaKnown RBP13.94□□□□□ -0.18
ITSN1-214ENST00000419241 ILDR2Q71H61 639 aa13.93□□□□□ -0.18
ITSN1-214ENST00000419241 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
ITSN1-214ENST00000419241 CEP170Q5SW79 1584 aa13.87□□□□□ -0.19
ITSN1-214ENST00000419241 DIP2BQ9P265 1576 aa13.87□□□□□ -0.19
ITSN1-214ENST00000419241 CCDC88BA6NC98 1476 aa13.84□□□□□ -0.19
ITSN1-214ENST00000419241 DISP3Q9P2K9 1392 aa13.83□□□□□ -0.2
ITSN1-214ENST00000419241 MAPKBP1O60336 1514 aa13.82□□□□□ -0.2
ITSN1-214ENST00000419241 FGD5Q6ZNL6 1462 aa13.8□□□□□ -0.2
ITSN1-214ENST00000419241 NPM1P06748 294 aaKnown RBP eCLIP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms