RNA–Protein interactions for RNA: ENST00000418808.1

CNOT9-203, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-203ENST00000418808 NISCHQ9Y2I1 1504 aa20.38■□□□□ 0.85
CNOT9-203ENST00000418808 AEBP2Q6ZN18 517 aaPredicted RBP19.09■□□□□ 0.65
CNOT9-203ENST00000418808 CCDC180Q9P1Z9 1646 aa17.9■□□□□ 0.46
CNOT9-203ENST00000418808 CHIC1Q5VXU3 224 aa17.8■□□□□ 0.44
CNOT9-203ENST00000418808 ABCC9O60706 1549 aa17.32■□□□□ 0.36
CNOT9-203ENST00000418808 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
CNOT9-203ENST00000418808 DCAF1Q9Y4B6 1507 aa16.86■□□□□ 0.29
CNOT9-203ENST00000418808 MYO15BQ96JP2 1530 aa16.81■□□□□ 0.28
CNOT9-203ENST00000418808 NACADO15069 1562 aa16.77■□□□□ 0.27
CNOT9-203ENST00000418808 DCAF8L2P0C7V8 631 aa16.73■□□□□ 0.27
CNOT9-203ENST00000418808 RB1CC1Q8TDY2 1594 aa16.68■□□□□ 0.26
CNOT9-203ENST00000418808 UNC13AQ9UPW8 1703 aa16.44■□□□□ 0.22
CNOT9-203ENST00000418808 SENP3Q9H4L4 574 aaPredicted RBP16.43■□□□□ 0.22
CNOT9-203ENST00000418808 SCRIBQ14160 1630 aa16.4■□□□□ 0.22
CNOT9-203ENST00000418808 BICRAQ9NZM4 1560 aa16.39■□□□□ 0.21
CNOT9-203ENST00000418808 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
CNOT9-203ENST00000418808 SHROOM4Q9ULL8 1493 aa16.23■□□□□ 0.19
CNOT9-203ENST00000418808 DNAJC5BQ9UF47 199 aa16.15■□□□□ 0.18
CNOT9-203ENST00000418808 PHF23Q9BUL5 403 aaPredicted RBP16.07■□□□□ 0.16
CNOT9-203ENST00000418808 POTEDQ86YR6 584 aa15.97■□□□□ 0.15
CNOT9-203ENST00000418808 CECR2Q9BXF3 1484 aa15.95■□□□□ 0.14
CNOT9-203ENST00000418808 EIF4G1Q04637 1599 aaKnown RBP15.82■□□□□ 0.12
CNOT9-203ENST00000418808 MROH2BQ7Z745 1585 aa15.77■□□□□ 0.11
CNOT9-203ENST00000418808 SMARCA4P51532 1647 aa15.74■□□□□ 0.11
CNOT9-203ENST00000418808 BAZ1AQ9NRL2 1556 aaPredicted RBP15.69■□□□□ 0.1
CNOT9-203ENST00000418808 CC2D2AQ9P2K1 1620 aa15.68■□□□□ 0.1
CNOT9-203ENST00000418808 RSF1Q96T23 1441 aaPredicted RBP15.68■□□□□ 0.1
CNOT9-203ENST00000418808 PEG3Q9GZU2 1588 aa15.62■□□□□ 0.09
CNOT9-203ENST00000418808 ATAD2BQ9ULI0 1458 aa15.61■□□□□ 0.09
CNOT9-203ENST00000418808 WIZO95785 1651 aa15.57■□□□□ 0.08
CNOT9-203ENST00000418808 NCAPD3P42695 1498 aa15.55■□□□□ 0.08
CNOT9-203ENST00000418808 SMARCA2P51531 1590 aa15.48■□□□□ 0.07
CNOT9-203ENST00000418808 HMGXB3Q12766 1538 aa15.45■□□□□ 0.06
CNOT9-203ENST00000418808 FOXD1Q16676 465 aa15.42■□□□□ 0.06
CNOT9-203ENST00000418808 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
CNOT9-203ENST00000418808 TOP2AP11388 1531 aaKnown RBP15.38■□□□□ 0.05
CNOT9-203ENST00000418808 SUPT5HO00267 1087 aaKnown RBP15.34■□□□□ 0.05
CNOT9-203ENST00000418808 CCDC88BA6NC98 1476 aa15.25■□□□□ 0.03
CNOT9-203ENST00000418808 NESP48681 1621 aa15.15■□□□□ 0.02
CNOT9-203ENST00000418808 CFTRP13569 1480 aa15.08■□□□□ 0.01
CNOT9-203ENST00000418808 CADPSQ9ULU8 1353 aa15.08■□□□□ 0
CNOT9-203ENST00000418808 DNAJC5Q9H3Z4 198 aa15.01□□□□□ -0.01
CNOT9-203ENST00000418808 LAMC3Q9Y6N6 1575 aa15□□□□□ -0.01
CNOT9-203ENST00000418808 CUX2O14529 1486 aa14.95□□□□□ -0.02
CNOT9-203ENST00000418808 KIF21AQ7Z4S6 1674 aa14.9□□□□□ -0.02
CNOT9-203ENST00000418808 ERCC6Q03468 1493 aa14.89□□□□□ -0.03
CNOT9-203ENST00000418808 FANCD2Q9BXW9 1451 aa14.89□□□□□ -0.03
CNOT9-203ENST00000418808 PRDM2Q13029 1718 aa14.87□□□□□ -0.03
CNOT9-203ENST00000418808 PDS5BQ9NTI5 1447 aa14.84□□□□□ -0.03
CNOT9-203ENST00000418808 THOC2Q8NI27 1593 aaKnown RBP14.82□□□□□ -0.04
CNOT9-203ENST00000418808 URB2Q14146 1524 aaKnown RBP14.82□□□□□ -0.04
CNOT9-203ENST00000418808 MSH5O43196 834 aa14.79□□□□□ -0.04
CNOT9-203ENST00000418808 CEP164Q9UPV0 1460 aa14.79□□□□□ -0.04
CNOT9-203ENST00000418808 ABCC8Q09428 1581 aa14.77□□□□□ -0.04
CNOT9-203ENST00000418808 CUX1P39880 1505 aa14.76□□□□□ -0.05
CNOT9-203ENST00000418808 MRC2Q9UBG0 1479 aa14.75□□□□□ -0.05
CNOT9-203ENST00000418808 WDR62O43379 1518 aa14.74□□□□□ -0.05
CNOT9-203ENST00000418808 SYNJ1O43426 1573 aa14.72□□□□□ -0.05
CNOT9-203ENST00000418808 TOPBP1Q92547 1522 aa14.71□□□□□ -0.05
CNOT9-203ENST00000418808 DNMBPQ6XZF7 1577 aa14.68□□□□□ -0.06
CNOT9-203ENST00000418808 WRNQ14191 1432 aaPredicted RBP eCLIP14.66□□□□□ -0.06
CNOT9-203ENST00000418808 TOP2BQ02880 1626 aa14.63□□□□□ -0.07
CNOT9-203ENST00000418808 BIVM-ERCC5R4GMW8 1640 aa14.63□□□□□ -0.07
CNOT9-203ENST00000418808 POLA1P09884 1462 aaPredicted RBP14.63□□□□□ -0.07
CNOT9-203ENST00000418808 FGD5Q6ZNL6 1462 aa14.61□□□□□ -0.07
CNOT9-203ENST00000418808 RAD54L2Q9Y4B4 1467 aa14.59□□□□□ -0.07
CNOT9-203ENST00000418808 TARBP1Q13395 1621 aaKnown RBP14.58□□□□□ -0.08
CNOT9-203ENST00000418808 ZNF608Q9ULD9 1512 aaPredicted RBP14.53□□□□□ -0.08
CNOT9-203ENST00000418808 WDR97A6NE52 1622 aa14.51□□□□□ -0.09
CNOT9-203ENST00000418808 SOGA1O94964 1423 aa14.5□□□□□ -0.09
CNOT9-203ENST00000418808 ABCA10Q8WWZ4 1543 aa14.48□□□□□ -0.09
CNOT9-203ENST00000418808 IFT140Q96RY7 1462 aa14.48□□□□□ -0.09
CNOT9-203ENST00000418808 RUSC2Q8N2Y8 1516 aa14.46□□□□□ -0.09
CNOT9-203ENST00000418808 AQRO60306 1485 aaKnown RBP eCLIP14.44□□□□□ -0.14e-8■■■■■ 31.9
CNOT9-203ENST00000418808 TDRD9Q8NDG6 1382 aaKnown RBP14.44□□□□□ -0.1
CNOT9-203ENST00000418808 ABCA5Q8WWZ7 1642 aa14.42□□□□□ -0.1
CNOT9-203ENST00000418808 TRIM41Q8WV44 630 aa14.42□□□□□ -0.1
CNOT9-203ENST00000418808 EIF4G3O43432 1585 aaKnown RBP14.4□□□□□ -0.1
CNOT9-203ENST00000418808 GAPVD1Q14C86 1478 aa14.34□□□□□ -0.11
CNOT9-203ENST00000418808 IGF1RP08069 1367 aa14.34□□□□□ -0.11
CNOT9-203ENST00000418808 KIF27Q86VH2 1401 aa14.29□□□□□ -0.12
CNOT9-203ENST00000418808 GRIN2BQ13224 1484 aa14.28□□□□□ -0.12
CNOT9-203ENST00000418808 PBRM1Q86U86 1689 aa14.27□□□□□ -0.12
CNOT9-203ENST00000418808 SNAPC4Q5SXM2 1469 aa14.26□□□□□ -0.13
CNOT9-203ENST00000418808 ERICH3Q5RHP9 1530 aa14.25□□□□□ -0.13
CNOT9-203ENST00000418808 ADAMTS12P58397 1594 aa14.24□□□□□ -0.13
CNOT9-203ENST00000418808 OSCARQ8IYS5 282 aa14.23□□□□□ -0.13
CNOT9-203ENST00000418808 PRXQ9BXM0 1461 aa14.22□□□□□ -0.13
CNOT9-203ENST00000418808 MAGI1Q96QZ7 1491 aaPredicted RBP14.21□□□□□ -0.13
CNOT9-203ENST00000418808 FAM9AQ8IZU1 332 aaPredicted RBP14.18□□□□□ -0.14
CNOT9-203ENST00000418808 FHAD1B1AJZ9 1412 aa14.17□□□□□ -0.14
CNOT9-203ENST00000418808 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
CNOT9-203ENST00000418808 SYNJ2O15056 1496 aa14.17□□□□□ -0.14
CNOT9-203ENST00000418808 CARMIL1Q5VZK9 1371 aa14.16□□□□□ -0.14
CNOT9-203ENST00000418808 EEA1Q15075 1411 aa14.15□□□□□ -0.14
CNOT9-203ENST00000418808 CHD1O14646 1710 aa14.15□□□□□ -0.14
CNOT9-203ENST00000418808 GRIN2AQ12879 1464 aa14.14□□□□□ -0.15
CNOT9-203ENST00000418808 RAPGEF2Q9Y4G8 1499 aa14.14□□□□□ -0.15
CNOT9-203ENST00000418808 PIAS4Q8N2W9 510 aaPredicted RBP14.14□□□□□ -0.15
CNOT9-203ENST00000418808 CUL7Q14999 1698 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms