RNA–Protein interactions for RNA: ENST00000417615.1

RPL3P4-201, Transcript of ribosomal protein L3 pseudogene 4, humanhuman

BASIC

Gene RPL3P4, Length 423 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P4-201ENST00000417615 AEBP2Q6ZN18 517 aaPredicted RBP22.3■■□□□ 1.16
RPL3P4-201ENST00000417615 CHIC1Q5VXU3 224 aa20.94■□□□□ 0.94
RPL3P4-201ENST00000417615 NISCHQ9Y2I1 1504 aa19.91■□□□□ 0.78
RPL3P4-201ENST00000417615 SENP3Q9H4L4 574 aaPredicted RBP18.95■□□□□ 0.62
RPL3P4-201ENST00000417615 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
RPL3P4-201ENST00000417615 FOXD1Q16676 465 aa17.75■□□□□ 0.43
RPL3P4-201ENST00000417615 CCDC180Q9P1Z9 1646 aa17.7■□□□□ 0.42
RPL3P4-201ENST00000417615 ABCC9O60706 1549 aa17.27■□□□□ 0.36
RPL3P4-201ENST00000417615 PLPPR3Q6T4P5 718 aa16.62■□□□□ 0.25
RPL3P4-201ENST00000417615 RB1CC1Q8TDY2 1594 aa16.61■□□□□ 0.25
RPL3P4-201ENST00000417615 NACADO15069 1562 aa16.6■□□□□ 0.25
RPL3P4-201ENST00000417615 MSH5O43196 834 aa16.59■□□□□ 0.25
RPL3P4-201ENST00000417615 ZCCHC6Q5VYS8 1495 aaKnown RBP16.59■□□□□ 0.25
RPL3P4-201ENST00000417615 POTEDQ86YR6 584 aa16.56■□□□□ 0.24
RPL3P4-201ENST00000417615 MYO15BQ96JP2 1530 aa16.52■□□□□ 0.24
RPL3P4-201ENST00000417615 DCAF8L2P0C7V8 631 aa16.52■□□□□ 0.24
RPL3P4-201ENST00000417615 PIAS4Q8N2W9 510 aaPredicted RBP16.52■□□□□ 0.24
RPL3P4-201ENST00000417615 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
RPL3P4-201ENST00000417615 DCAF1Q9Y4B6 1507 aa16.46■□□□□ 0.23
RPL3P4-201ENST00000417615 ADRA2BP18089 450 aa16.43■□□□□ 0.22
RPL3P4-201ENST00000417615 UNC13AQ9UPW8 1703 aa16.38■□□□□ 0.21
RPL3P4-201ENST00000417615 BICRAQ9NZM4 1560 aa16.2■□□□□ 0.18
RPL3P4-201ENST00000417615 SCRIBQ14160 1630 aa16.15■□□□□ 0.18
RPL3P4-201ENST00000417615 PABPN1Q86U42 306 aaKnown RBP eCLIP16.13■□□□□ 0.17
RPL3P4-201ENST00000417615 SHROOM4Q9ULL8 1493 aa15.91■□□□□ 0.14
RPL3P4-201ENST00000417615 DNAJC5BQ9UF47 199 aa15.89■□□□□ 0.13
RPL3P4-201ENST00000417615 EIF4G1Q04637 1599 aaKnown RBP15.71■□□□□ 0.11
RPL3P4-201ENST00000417615 CC2D2AQ9P2K1 1620 aa15.65■□□□□ 0.1
RPL3P4-201ENST00000417615 CECR2Q9BXF3 1484 aa15.54■□□□□ 0.08
RPL3P4-201ENST00000417615 SMARCA4P51532 1647 aa15.46■□□□□ 0.06
RPL3P4-201ENST00000417615 BAZ1AQ9NRL2 1556 aaPredicted RBP15.4■□□□□ 0.06
RPL3P4-201ENST00000417615 MROH2BQ7Z745 1585 aa15.37■□□□□ 0.05
RPL3P4-201ENST00000417615 ATAD2BQ9ULI0 1458 aa15.34■□□□□ 0.05
RPL3P4-201ENST00000417615 NCAPD3P42695 1498 aa15.33■□□□□ 0.04
RPL3P4-201ENST00000417615 PEG3Q9GZU2 1588 aa15.31■□□□□ 0.04
RPL3P4-201ENST00000417615 SMARCA2P51531 1590 aa15.29■□□□□ 0.04
RPL3P4-201ENST00000417615 HMGXB3Q12766 1538 aa15.26■□□□□ 0.03
RPL3P4-201ENST00000417615 WIZO95785 1651 aa15.22■□□□□ 0.03
RPL3P4-201ENST00000417615 BAZ1BQ9UIG0 1483 aaKnown RBP15.18■□□□□ 0.02
RPL3P4-201ENST00000417615 RSF1Q96T23 1441 aaPredicted RBP15.17■□□□□ 0.02
RPL3P4-201ENST00000417615 MAPK8IP2Q13387 824 aaPredicted RBP15.16■□□□□ 0.02
RPL3P4-201ENST00000417615 DMRT2Q9Y5R5 561 aa15.02■□□□□ -0
RPL3P4-201ENST00000417615 TOP2AP11388 1531 aaKnown RBP15.01□□□□□ -0.01
RPL3P4-201ENST00000417615 NESP48681 1621 aa14.99□□□□□ -0.01
RPL3P4-201ENST00000417615 LAMC3Q9Y6N6 1575 aa14.92□□□□□ -0.02
RPL3P4-201ENST00000417615 SCAF1Q9H7N4 1312 aaKnown RBP14.91□□□□□ -0.02
RPL3P4-201ENST00000417615 CADPSQ9ULU8 1353 aa14.86□□□□□ -0.03
RPL3P4-201ENST00000417615 KIF21AQ7Z4S6 1674 aa14.84□□□□□ -0.03
RPL3P4-201ENST00000417615 CCDC88BA6NC98 1476 aa14.84□□□□□ -0.03
RPL3P4-201ENST00000417615 ERCC6Q03468 1493 aa14.82□□□□□ -0.04
RPL3P4-201ENST00000417615 CFTRP13569 1480 aa14.8□□□□□ -0.04
RPL3P4-201ENST00000417615 THOC2Q8NI27 1593 aaKnown RBP14.77□□□□□ -0.04
RPL3P4-201ENST00000417615 PDS5BQ9NTI5 1447 aa14.76□□□□□ -0.05
RPL3P4-201ENST00000417615 PRDM2Q13029 1718 aa14.76□□□□□ -0.05
RPL3P4-201ENST00000417615 SUPT5HO00267 1087 aaKnown RBP14.74□□□□□ -0.05
RPL3P4-201ENST00000417615 EHMT2Q96KQ7 1210 aa14.73□□□□□ -0.05
RPL3P4-201ENST00000417615 CUX2O14529 1486 aa14.69□□□□□ -0.06
RPL3P4-201ENST00000417615 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
RPL3P4-201ENST00000417615 CEP164Q9UPV0 1460 aa14.66□□□□□ -0.06
RPL3P4-201ENST00000417615 MRC2Q9UBG0 1479 aa14.64□□□□□ -0.07
RPL3P4-201ENST00000417615 WDR62O43379 1518 aa14.62□□□□□ -0.07
RPL3P4-201ENST00000417615 PPP4R3CPQ6ZMV5 832 aa14.59□□□□□ -0.07
RPL3P4-201ENST00000417615 URB2Q14146 1524 aaKnown RBP14.59□□□□□ -0.07
RPL3P4-201ENST00000417615 KCNA4P22459 653 aa14.56□□□□□ -0.08
RPL3P4-201ENST00000417615 TOPBP1Q92547 1522 aa14.49□□□□□ -0.09
RPL3P4-201ENST00000417615 DNMBPQ6XZF7 1577 aa14.47□□□□□ -0.09
RPL3P4-201ENST00000417615 DCAF8L1A6NGE4 600 aa14.43□□□□□ -0.1
RPL3P4-201ENST00000417615 ABCC8Q09428 1581 aa14.43□□□□□ -0.1
RPL3P4-201ENST00000417615 CUX1P39880 1505 aa14.41□□□□□ -0.1
RPL3P4-201ENST00000417615 HOXD11P31277 338 aaPredicted RBP14.4□□□□□ -0.1
RPL3P4-201ENST00000417615 CACNB1Q02641 598 aaPredicted RBP14.38□□□□□ -0.11
RPL3P4-201ENST00000417615 POLA1P09884 1462 aaPredicted RBP14.37□□□□□ -0.11
RPL3P4-201ENST00000417615 TARBP1Q13395 1621 aaKnown RBP14.37□□□□□ -0.11
RPL3P4-201ENST00000417615 IFT140Q96RY7 1462 aa14.36□□□□□ -0.11
RPL3P4-201ENST00000417615 ZNF608Q9ULD9 1512 aaPredicted RBP14.35□□□□□ -0.11
RPL3P4-201ENST00000417615 FGD5Q6ZNL6 1462 aa14.33□□□□□ -0.12
RPL3P4-201ENST00000417615 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
RPL3P4-201ENST00000417615 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
RPL3P4-201ENST00000417615 SYNJ1O43426 1573 aa14.3□□□□□ -0.12
RPL3P4-201ENST00000417615 BIVM-ERCC5R4GMW8 1640 aa14.3□□□□□ -0.12
RPL3P4-201ENST00000417615 WDR97A6NE52 1622 aa14.28□□□□□ -0.12
RPL3P4-201ENST00000417615 EIF4G3O43432 1585 aaKnown RBP14.28□□□□□ -0.12
RPL3P4-201ENST00000417615 TOP2BQ02880 1626 aa14.28□□□□□ -0.12
RPL3P4-201ENST00000417615 SOGA1O94964 1423 aa14.27□□□□□ -0.12
RPL3P4-201ENST00000417615 WRNQ14191 1432 aaPredicted RBP eCLIP14.27□□□□□ -0.12
RPL3P4-201ENST00000417615 AQRO60306 1485 aaKnown RBP eCLIP14.24□□□□□ -0.13
RPL3P4-201ENST00000417615 DNAJC5Q9H3Z4 198 aa14.23□□□□□ -0.13
RPL3P4-201ENST00000417615 RNF216Q9NWF9 866 aaPredicted RBP14.23□□□□□ -0.13
RPL3P4-201ENST00000417615 TDRD9Q8NDG6 1382 aaKnown RBP14.21□□□□□ -0.14
RPL3P4-201ENST00000417615 RNF39Q9H2S5 420 aa14.19□□□□□ -0.14
RPL3P4-201ENST00000417615 ABCA10Q8WWZ4 1543 aa14.19□□□□□ -0.14
RPL3P4-201ENST00000417615 ABCA5Q8WWZ7 1642 aa14.17□□□□□ -0.14
RPL3P4-201ENST00000417615 PBRM1Q86U86 1689 aa14.15□□□□□ -0.14
RPL3P4-201ENST00000417615 CHD1O14646 1710 aa14.14□□□□□ -0.15
RPL3P4-201ENST00000417615 GAPVD1Q14C86 1478 aa14.12□□□□□ -0.15
RPL3P4-201ENST00000417615 GRIN2BQ13224 1484 aa14.11□□□□□ -0.15
RPL3P4-201ENST00000417615 SNAPC4Q5SXM2 1469 aa14.11□□□□□ -0.15
RPL3P4-201ENST00000417615 MAGI1Q96QZ7 1491 aaPredicted RBP14.06□□□□□ -0.16
RPL3P4-201ENST00000417615 SLC4A1APQ9BWU0 796 aaKnown RBP14.06□□□□□ -0.16
RPL3P4-201ENST00000417615 OSCARQ8IYS5 282 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms