RNA–Protein interactions for RNA: ENST00000417608.1

ABCB4-204, Transcript of ATP binding cassette subfamily B member 4, humanhuman

TSL 1 (best)

Gene ABCB4, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB4-204ENST00000417608 NISCHQ9Y2I1 1504 aa24.52■■□□□ 1.52
ABCB4-204ENST00000417608 CCDC180Q9P1Z9 1646 aa21.04■□□□□ 0.96
ABCB4-204ENST00000417608 ZCCHC6Q5VYS8 1495 aaKnown RBP20.71■□□□□ 0.91
ABCB4-204ENST00000417608 SHROOM4Q9ULL8 1493 aa20.57■□□□□ 0.88
ABCB4-204ENST00000417608 DCAF8L2P0C7V8 631 aa20.2■□□□□ 0.82
ABCB4-204ENST00000417608 DCAF1Q9Y4B6 1507 aa20.16■□□□□ 0.82
ABCB4-204ENST00000417608 SUPT5HO00267 1087 aaKnown RBP19.98■□□□□ 0.79
ABCB4-204ENST00000417608 MYO15BQ96JP2 1530 aa19.69■□□□□ 0.74
ABCB4-204ENST00000417608 ABCC9O60706 1549 aa19.64■□□□□ 0.73
ABCB4-204ENST00000417608 SCRIBQ14160 1630 aa19.6■□□□□ 0.73
ABCB4-204ENST00000417608 NACADO15069 1562 aa19.47■□□□□ 0.71
ABCB4-204ENST00000417608 CHIC1Q5VXU3 224 aa19.36■□□□□ 0.69
ABCB4-204ENST00000417608 RSF1Q96T23 1441 aaPredicted RBP19.27■□□□□ 0.68
ABCB4-204ENST00000417608 RB1CC1Q8TDY2 1594 aa19.2■□□□□ 0.66
ABCB4-204ENST00000417608 CECR2Q9BXF3 1484 aa19.14■□□□□ 0.65
ABCB4-204ENST00000417608 MROH2BQ7Z745 1585 aa19.05■□□□□ 0.64
ABCB4-204ENST00000417608 UNC13AQ9UPW8 1703 aa19■□□□□ 0.63
ABCB4-204ENST00000417608 WIZO95785 1651 aa18.94■□□□□ 0.62
ABCB4-204ENST00000417608 BAZ1AQ9NRL2 1556 aaPredicted RBP18.84■□□□□ 0.61
ABCB4-204ENST00000417608 BICRAQ9NZM4 1560 aa18.76■□□□□ 0.59
ABCB4-204ENST00000417608 SMARCA4P51532 1647 aa18.75■□□□□ 0.59
ABCB4-204ENST00000417608 LOC105371045A0A1W2PR82 267 aa18.74■□□□□ 0.59
ABCB4-204ENST00000417608 PABPN1Q86U42 306 aaKnown RBP eCLIP18.67■□□□□ 0.58
ABCB4-204ENST00000417608 TRIM41Q8WV44 630 aa18.64■□□□□ 0.58
ABCB4-204ENST00000417608 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.57
ABCB4-204ENST00000417608 EIF4G1Q04637 1599 aaKnown RBP18.63■□□□□ 0.57
ABCB4-204ENST00000417608 SMARCA2P51531 1590 aa18.54■□□□□ 0.56
ABCB4-204ENST00000417608 CCDC88BA6NC98 1476 aa18.53■□□□□ 0.56
ABCB4-204ENST00000417608 FAM9AQ8IZU1 332 aaPredicted RBP18.46■□□□□ 0.55
ABCB4-204ENST00000417608 PEG3Q9GZU2 1588 aa18.45■□□□□ 0.54
ABCB4-204ENST00000417608 ABCC8Q09428 1581 aa18.39■□□□□ 0.53
ABCB4-204ENST00000417608 PCGF6Q9BYE7 350 aa18.38■□□□□ 0.53
ABCB4-204ENST00000417608 ATAD2BQ9ULI0 1458 aa18.32■□□□□ 0.52
ABCB4-204ENST00000417608 EHMT2Q96KQ7 1210 aa18.28■□□□□ 0.52
ABCB4-204ENST00000417608 BAZ1BQ9UIG0 1483 aaKnown RBP18.22■□□□□ 0.51
ABCB4-204ENST00000417608 HRCP23327 699 aa18.2■□□□□ 0.5
ABCB4-204ENST00000417608 SOGA1O94964 1423 aa18.13■□□□□ 0.49
ABCB4-204ENST00000417608 TRIM26Q12899 539 aaPredicted RBP18.11■□□□□ 0.49
ABCB4-204ENST00000417608 WRNQ14191 1432 aaPredicted RBP eCLIP18.08■□□□□ 0.49
ABCB4-204ENST00000417608 RUSC2Q8N2Y8 1516 aa18.08■□□□□ 0.48
ABCB4-204ENST00000417608 SYNJ1O43426 1573 aa18.07■□□□□ 0.48
ABCB4-204ENST00000417608 HMGXB3Q12766 1538 aa18.02■□□□□ 0.48
ABCB4-204ENST00000417608 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
ABCB4-204ENST00000417608 EEA1Q15075 1411 aa17.96■□□□□ 0.47
ABCB4-204ENST00000417608 CSRNP3Q8WYN3 585 aa17.93■□□□□ 0.46
ABCB4-204ENST00000417608 PPARGC1BQ86YN6 1023 aaKnown RBP17.89■□□□□ 0.46
ABCB4-204ENST00000417608 CEP162Q5TB80 1403 aa17.89■□□□□ 0.45
ABCB4-204ENST00000417608 TNIKQ9UKE5 1360 aa17.88■□□□□ 0.45
ABCB4-204ENST00000417608 TOP2BQ02880 1626 aa17.86■□□□□ 0.45
ABCB4-204ENST00000417608 GOLGA3Q08378 1498 aa17.84■□□□□ 0.45
ABCB4-204ENST00000417608 BIVM-ERCC5R4GMW8 1640 aa17.83■□□□□ 0.44
ABCB4-204ENST00000417608 KIF21BO75037 1637 aa17.8■□□□□ 0.44
ABCB4-204ENST00000417608 CFTRP13569 1480 aa17.79■□□□□ 0.44
ABCB4-204ENST00000417608 UBTFP17480 764 aaKnown RBP17.77■□□□□ 0.44
ABCB4-204ENST00000417608 CEP164Q9UPV0 1460 aa17.76■□□□□ 0.43
ABCB4-204ENST00000417608 CUX1P39880 1505 aa17.76■□□□□ 0.43
ABCB4-204ENST00000417608 CC2D2AQ9P2K1 1620 aa17.73■□□□□ 0.43
ABCB4-204ENST00000417608 RAPGEF2Q9Y4G8 1499 aa17.72■□□□□ 0.43
ABCB4-204ENST00000417608 PRDM2Q13029 1718 aa17.69■□□□□ 0.42
ABCB4-204ENST00000417608 TTBK1Q5TCY1 1321 aaPredicted RBP17.62■□□□□ 0.41
ABCB4-204ENST00000417608 CADPSQ9ULU8 1353 aa17.61■□□□□ 0.41
ABCB4-204ENST00000417608 CLIP1P30622 1438 aa17.6■□□□□ 0.41
ABCB4-204ENST00000417608 PRXQ9BXM0 1461 aa17.6■□□□□ 0.41
ABCB4-204ENST00000417608 ERICH3Q5RHP9 1530 aa17.56■□□□□ 0.4
ABCB4-204ENST00000417608 ZEB1P37275 1124 aaPredicted RBP17.53■□□□□ 0.4
ABCB4-204ENST00000417608 KIF27Q86VH2 1401 aa17.53■□□□□ 0.4
ABCB4-204ENST00000417608 VPS8Q8N3P4 1428 aa17.51■□□□□ 0.39
ABCB4-204ENST00000417608 RANGAP1P46060 587 aaPredicted RBP17.48■□□□□ 0.39
ABCB4-204ENST00000417608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.47■□□□□ 0.39
ABCB4-204ENST00000417608 FGD5Q6ZNL6 1462 aa17.46■□□□□ 0.39
ABCB4-204ENST00000417608 FANCD2Q9BXW9 1451 aa17.45■□□□□ 0.38
ABCB4-204ENST00000417608 NESP48681 1621 aa17.44■□□□□ 0.38
ABCB4-204ENST00000417608 CUX2O14529 1486 aa17.44■□□□□ 0.38
ABCB4-204ENST00000417608 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
ABCB4-204ENST00000417608 IGF1RP08069 1367 aa17.39■□□□□ 0.37
ABCB4-204ENST00000417608 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
ABCB4-204ENST00000417608 DNMBPQ6XZF7 1577 aa17.35■□□□□ 0.37
ABCB4-204ENST00000417608 CCER1Q8TC90 406 aaPredicted RBP17.35■□□□□ 0.37
ABCB4-204ENST00000417608 TOPBP1Q92547 1522 aa17.33■□□□□ 0.36
ABCB4-204ENST00000417608 ARHGAP35Q9NRY4 1499 aa17.32■□□□□ 0.36
ABCB4-204ENST00000417608 RAD54L2Q9Y4B4 1467 aa17.31■□□□□ 0.36
ABCB4-204ENST00000417608 POLA1P09884 1462 aaPredicted RBP17.31■□□□□ 0.36
ABCB4-204ENST00000417608 LAMC3Q9Y6N6 1575 aa17.29■□□□□ 0.36
ABCB4-204ENST00000417608 CARMIL1Q5VZK9 1371 aa17.28■□□□□ 0.36
ABCB4-204ENST00000417608 ABCA10Q8WWZ4 1543 aa17.27■□□□□ 0.35
ABCB4-204ENST00000417608 APLP2Q06481 763 aa17.26■□□□□ 0.35
ABCB4-204ENST00000417608 URB2Q14146 1524 aaKnown RBP17.26■□□□□ 0.35
ABCB4-204ENST00000417608 KANK4Q5T7N3 995 aaPredicted RBP17.23■□□□□ 0.35
ABCB4-204ENST00000417608 HNRNPUL2Q1KMD3 747 aaKnown RBP17.21■□□□□ 0.35
ABCB4-204ENST00000417608 WDR97A6NE52 1622 aa17.2■□□□□ 0.34
ABCB4-204ENST00000417608 KIF21AQ7Z4S6 1674 aa17.18■□□□□ 0.34
ABCB4-204ENST00000417608 PDS5BQ9NTI5 1447 aa17.13■□□□□ 0.33
ABCB4-204ENST00000417608 CUL7Q14999 1698 aa17.12■□□□□ 0.33
ABCB4-204ENST00000417608 ABCA5Q8WWZ7 1642 aa17.11■□□□□ 0.33
ABCB4-204ENST00000417608 TDRD9Q8NDG6 1382 aaKnown RBP17.08■□□□□ 0.33
ABCB4-204ENST00000417608 RRBP1Q9P2E9 1410 aaKnown RBP17.08■□□□□ 0.32
ABCB4-204ENST00000417608 TIAM1Q13009 1591 aa17.07■□□□□ 0.32
ABCB4-204ENST00000417608 CTTNBP2Q8WZ74 1663 aa17.06■□□□□ 0.32
ABCB4-204ENST00000417608 PCF11O94913 1555 aaKnown RBP17.05■□□□□ 0.32
ABCB4-204ENST00000417608 TARBP1Q13395 1621 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms