RNA–Protein interactions for RNA: ENST00000417271.1

SLC8A1-210, Transcript of solute carrier family 8 member A1, humanhuman

TSL 1 (best)

Gene SLC8A1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8A1-210ENST00000417271 NISCHQ9Y2I1 1504 aa13.42□□□□□ -0.26
SLC8A1-210ENST00000417271 CCDC180Q9P1Z9 1646 aa11.86□□□□□ -0.51
SLC8A1-210ENST00000417271 ABCC9O60706 1549 aa11.63□□□□□ -0.55
SLC8A1-210ENST00000417271 DCAF8L2P0C7V8 631 aa11.24□□□□□ -0.61
SLC8A1-210ENST00000417271 ZCCHC6Q5VYS8 1495 aaKnown RBP11.2□□□□□ -0.62
SLC8A1-210ENST00000417271 NACADO15069 1562 aa11.14□□□□□ -0.63
SLC8A1-210ENST00000417271 RB1CC1Q8TDY2 1594 aa11.14□□□□□ -0.63
SLC8A1-210ENST00000417271 MYO15BQ96JP2 1530 aa11.07□□□□□ -0.64
SLC8A1-210ENST00000417271 DCAF1Q9Y4B6 1507 aa11.05□□□□□ -0.64
SLC8A1-210ENST00000417271 SCRIBQ14160 1630 aa10.91□□□□□ -0.66
SLC8A1-210ENST00000417271 UNC13AQ9UPW8 1703 aa10.9□□□□□ -0.66
SLC8A1-210ENST00000417271 PABPN1Q86U42 306 aaKnown RBP eCLIP10.9□□□□□ -0.66
SLC8A1-210ENST00000417271 BICRAQ9NZM4 1560 aa10.85□□□□□ -0.67
SLC8A1-210ENST00000417271 SHROOM4Q9ULL8 1493 aa10.74□□□□□ -0.69
SLC8A1-210ENST00000417271 DNAJC5BQ9UF47 199 aa10.63□□□□□ -0.71
SLC8A1-210ENST00000417271 EIF4G1Q04637 1599 aaKnown RBP10.54□□□□□ -0.72
SLC8A1-210ENST00000417271 CECR2Q9BXF3 1484 aa10.5□□□□□ -0.73
SLC8A1-210ENST00000417271 CC2D2AQ9P2K1 1620 aa10.49□□□□□ -0.73
SLC8A1-210ENST00000417271 SMARCA4P51532 1647 aa10.4□□□□□ -0.74
SLC8A1-210ENST00000417271 MROH2BQ7Z745 1585 aa10.38□□□□□ -0.75
SLC8A1-210ENST00000417271 BAZ1AQ9NRL2 1556 aaPredicted RBP10.38□□□□□ -0.75
SLC8A1-210ENST00000417271 ATAD2BQ9ULI0 1458 aa10.33□□□□□ -0.76
SLC8A1-210ENST00000417271 AEBP2Q6ZN18 517 aaPredicted RBP10.3□□□□□ -0.76
SLC8A1-210ENST00000417271 NCAPD3P42695 1498 aa10.3□□□□□ -0.76
SLC8A1-210ENST00000417271 SMARCA2P51531 1590 aa10.29□□□□□ -0.76
SLC8A1-210ENST00000417271 RSF1Q96T23 1441 aaPredicted RBP10.27□□□□□ -0.77
SLC8A1-210ENST00000417271 PEG3Q9GZU2 1588 aa10.26□□□□□ -0.77
SLC8A1-210ENST00000417271 WIZO95785 1651 aa10.26□□□□□ -0.77
SLC8A1-210ENST00000417271 BAZ1BQ9UIG0 1483 aaKnown RBP10.26□□□□□ -0.77
SLC8A1-210ENST00000417271 HMGXB3Q12766 1538 aa10.25□□□□□ -0.77
SLC8A1-210ENST00000417271 TOP2AP11388 1531 aaKnown RBP10.13□□□□□ -0.79
SLC8A1-210ENST00000417271 SUPT5HO00267 1087 aaKnown RBP10.1□□□□□ -0.79
SLC8A1-210ENST00000417271 NESP48681 1621 aa10.1□□□□□ -0.79
SLC8A1-210ENST00000417271 CCDC88BA6NC98 1476 aa10.04□□□□□ -0.8
SLC8A1-210ENST00000417271 CADPSQ9ULU8 1353 aa10.01□□□□□ -0.81
SLC8A1-210ENST00000417271 LAMC3Q9Y6N6 1575 aa10□□□□□ -0.81
SLC8A1-210ENST00000417271 ERCC6Q03468 1493 aa9.99□□□□□ -0.81
SLC8A1-210ENST00000417271 CFTRP13569 1480 aa9.97□□□□□ -0.81
SLC8A1-210ENST00000417271 KIF21AQ7Z4S6 1674 aa9.93□□□□□ -0.82
SLC8A1-210ENST00000417271 PDS5BQ9NTI5 1447 aa9.93□□□□□ -0.82
SLC8A1-210ENST00000417271 FANCD2Q9BXW9 1451 aa9.91□□□□□ -0.82
SLC8A1-210ENST00000417271 THOC2Q8NI27 1593 aaKnown RBP9.89□□□□□ -0.83
SLC8A1-210ENST00000417271 CEP164Q9UPV0 1460 aa9.88□□□□□ -0.83
SLC8A1-210ENST00000417271 MRC2Q9UBG0 1479 aa9.86□□□□□ -0.83
SLC8A1-210ENST00000417271 PRDM2Q13029 1718 aa9.85□□□□□ -0.83
SLC8A1-210ENST00000417271 URB2Q14146 1524 aaKnown RBP9.82□□□□□ -0.84
SLC8A1-210ENST00000417271 CUX2O14529 1486 aa9.82□□□□□ -0.84
SLC8A1-210ENST00000417271 WDR62O43379 1518 aa9.82□□□□□ -0.84
SLC8A1-210ENST00000417271 TOPBP1Q92547 1522 aa9.77□□□□□ -0.85
SLC8A1-210ENST00000417271 DNMBPQ6XZF7 1577 aa9.74□□□□□ -0.85
SLC8A1-210ENST00000417271 CUX1P39880 1505 aa9.73□□□□□ -0.85
SLC8A1-210ENST00000417271 ABCC8Q09428 1581 aa9.72□□□□□ -0.85
SLC8A1-210ENST00000417271 CHIC1Q5VXU3 224 aa9.72□□□□□ -0.85
SLC8A1-210ENST00000417271 POLA1P09884 1462 aaPredicted RBP9.69□□□□□ -0.86
SLC8A1-210ENST00000417271 FGD5Q6ZNL6 1462 aa9.68□□□□□ -0.86
SLC8A1-210ENST00000417271 WRNQ14191 1432 aaPredicted RBP eCLIP9.68□□□□□ -0.86
SLC8A1-210ENST00000417271 SYNJ1O43426 1573 aa9.67□□□□□ -0.86
SLC8A1-210ENST00000417271 RAD54L2Q9Y4B4 1467 aa9.67□□□□□ -0.86
SLC8A1-210ENST00000417271 ZNF608Q9ULD9 1512 aaPredicted RBP9.66□□□□□ -0.86
SLC8A1-210ENST00000417271 IFT140Q96RY7 1462 aa9.66□□□□□ -0.86
SLC8A1-210ENST00000417271 SOGA1O94964 1423 aa9.64□□□□□ -0.87
SLC8A1-210ENST00000417271 TARBP1Q13395 1621 aaKnown RBP9.64□□□□□ -0.87
SLC8A1-210ENST00000417271 TOP2BQ02880 1626 aa9.63□□□□□ -0.87
SLC8A1-210ENST00000417271 BIVM-ERCC5R4GMW8 1640 aa9.62□□□□□ -0.87
SLC8A1-210ENST00000417271 AQRO60306 1485 aaKnown RBP eCLIP9.61□□□□□ -0.87
SLC8A1-210ENST00000417271 TDRD9Q8NDG6 1382 aaKnown RBP9.61□□□□□ -0.87
SLC8A1-210ENST00000417271 EIF4G3O43432 1585 aaKnown RBP9.6□□□□□ -0.87
SLC8A1-210ENST00000417271 WDR97A6NE52 1622 aa9.57□□□□□ -0.88
SLC8A1-210ENST00000417271 ABCA10Q8WWZ4 1543 aa9.56□□□□□ -0.88
SLC8A1-210ENST00000417271 GAPVD1Q14C86 1478 aa9.53□□□□□ -0.88
SLC8A1-210ENST00000417271 ABCA5Q8WWZ7 1642 aa9.53□□□□□ -0.88
SLC8A1-210ENST00000417271 SNAPC4Q5SXM2 1469 aa9.52□□□□□ -0.89
SLC8A1-210ENST00000417271 GRIN2BQ13224 1484 aa9.51□□□□□ -0.89
SLC8A1-210ENST00000417271 PBRM1Q86U86 1689 aa9.49□□□□□ -0.89
SLC8A1-210ENST00000417271 TRIM41Q8WV44 630 aa9.49□□□□□ -0.89
SLC8A1-210ENST00000417271 FBLN2P98095 1184 aa9.48□□□□□ -0.89
SLC8A1-210ENST00000417271 MAGI1Q96QZ7 1491 aaPredicted RBP9.47□□□□□ -0.89
SLC8A1-210ENST00000417271 DNAJC5Q9H3Z4 198 aa9.46□□□□□ -0.9
SLC8A1-210ENST00000417271 RUSC2Q8N2Y8 1516 aa9.46□□□□□ -0.9
SLC8A1-210ENST00000417271 CHD1O14646 1710 aa9.45□□□□□ -0.9
SLC8A1-210ENST00000417271 KIF27Q86VH2 1401 aa9.45□□□□□ -0.9
SLC8A1-210ENST00000417271 ADAMTS12P58397 1594 aa9.45□□□□□ -0.9
SLC8A1-210ENST00000417271 OSCARQ8IYS5 282 aa9.44□□□□□ -0.9
SLC8A1-210ENST00000417271 SYNJ2O15056 1496 aa9.44□□□□□ -0.9
SLC8A1-210ENST00000417271 ERICH3Q5RHP9 1530 aa9.43□□□□□ -0.9
SLC8A1-210ENST00000417271 CHMP7Q8WUX9 453 aaPredicted RBP9.43□□□□□ -0.9
SLC8A1-210ENST00000417271 IGF1RP08069 1367 aa9.42□□□□□ -0.9
SLC8A1-210ENST00000417271 FHAD1B1AJZ9 1412 aa9.4□□□□□ -0.9
SLC8A1-210ENST00000417271 GRIN2AQ12879 1464 aa9.4□□□□□ -0.91
SLC8A1-210ENST00000417271 CEP170Q5SW79 1584 aa9.37□□□□□ -0.91
SLC8A1-210ENST00000417271 CARMIL1Q5VZK9 1371 aa9.37□□□□□ -0.91
SLC8A1-210ENST00000417271 CLASP1Q7Z460 1538 aa9.36□□□□□ -0.91
SLC8A1-210ENST00000417271 FAM9AQ8IZU1 332 aaPredicted RBP9.36□□□□□ -0.91
SLC8A1-210ENST00000417271 CUL7Q14999 1698 aa9.36□□□□□ -0.91
SLC8A1-210ENST00000417271 NUP160Q12769 1436 aa9.35□□□□□ -0.91
SLC8A1-210ENST00000417271 ARHGEF11O15085 1522 aa9.31□□□□□ -0.92
SLC8A1-210ENST00000417271 RAPGEF2Q9Y4G8 1499 aa9.31□□□□□ -0.92
SLC8A1-210ENST00000417271 PRXQ9BXM0 1461 aa9.3□□□□□ -0.92
SLC8A1-210ENST00000417271 CSRNP3Q8WYN3 585 aa9.3□□□□□ -0.92
SLC8A1-210ENST00000417271 RIMBP3CA6NJZ7 1639 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms