RNA–Protein interactions for RNA: ENST00000416910.1

SLC4A3-206, Transcript of solute carrier family 4 member 3, humanhuman

TSL 5

Gene SLC4A3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A3-206ENST00000416910 NISCHQ9Y2I1 1504 aa35.21■■■■□ 3.23
SLC4A3-206ENST00000416910 CCDC180Q9P1Z9 1646 aa30.95■■■□□ 2.55
SLC4A3-206ENST00000416910 ABCC9O60706 1549 aa29.63■■■□□ 2.33
SLC4A3-206ENST00000416910 ZCCHC6Q5VYS8 1495 aaKnown RBP29.5■■■□□ 2.31
SLC4A3-206ENST00000416910 DCAF8L2P0C7V8 631 aa29.2■■■□□ 2.26
SLC4A3-206ENST00000416910 DCAF1Q9Y4B6 1507 aa29.13■■■□□ 2.25
SLC4A3-206ENST00000416910 MYO15BQ96JP2 1530 aa28.96■■■□□ 2.23
SLC4A3-206ENST00000416910 NACADO15069 1562 aa28.92■■■□□ 2.22
SLC4A3-206ENST00000416910 RB1CC1Q8TDY2 1594 aa28.78■■■□□ 2.2
SLC4A3-206ENST00000416910 SHROOM4Q9ULL8 1493 aa28.77■■■□□ 2.2
SLC4A3-206ENST00000416910 SCRIBQ14160 1630 aa28.38■■■□□ 2.13
SLC4A3-206ENST00000416910 UNC13AQ9UPW8 1703 aa28.2■■■□□ 2.1
SLC4A3-206ENST00000416910 SUPT5HO00267 1087 aaKnown RBP28.03■■■□□ 2.08
SLC4A3-206ENST00000416910 BICRAQ9NZM4 1560 aa27.9■■■□□ 2.06
SLC4A3-206ENST00000416910 PABPN1Q86U42 306 aaKnown RBP eCLIP27.83■■■□□ 2.05
SLC4A3-206ENST00000416910 CECR2Q9BXF3 1484 aa27.39■■□□□ 1.97
SLC4A3-206ENST00000416910 RSF1Q96T23 1441 aaPredicted RBP27.3■■□□□ 1.96
SLC4A3-206ENST00000416910 BAZ1AQ9NRL2 1556 aaPredicted RBP27.24■■□□□ 1.95
SLC4A3-206ENST00000416910 CHIC1Q5VXU3 224 aa27.21■■□□□ 1.95
SLC4A3-206ENST00000416910 MROH2BQ7Z745 1585 aa27.19■■□□□ 1.94
SLC4A3-206ENST00000416910 SMARCA4P51532 1647 aa27.18■■□□□ 1.94
SLC4A3-206ENST00000416910 EIF4G1Q04637 1599 aaKnown RBP27.11■■□□□ 1.93
SLC4A3-206ENST00000416910 WIZO95785 1651 aa26.95■■□□□ 1.9
SLC4A3-206ENST00000416910 PEG3Q9GZU2 1588 aa26.86■■□□□ 1.89
SLC4A3-206ENST00000416910 ATAD2BQ9ULI0 1458 aa26.83■■□□□ 1.89
SLC4A3-206ENST00000416910 CC2D2AQ9P2K1 1620 aa26.82■■□□□ 1.88
SLC4A3-206ENST00000416910 SMARCA2P51531 1590 aa26.82■■□□□ 1.88
SLC4A3-206ENST00000416910 NCAPD3P42695 1498 aa26.67■■□□□ 1.86
SLC4A3-206ENST00000416910 TOP2AP11388 1531 aaKnown RBP26.66■■□□□ 1.86
SLC4A3-206ENST00000416910 BAZ1BQ9UIG0 1483 aaKnown RBP26.66■■□□□ 1.86
SLC4A3-206ENST00000416910 HMGXB3Q12766 1538 aa26.62■■□□□ 1.85
SLC4A3-206ENST00000416910 DNAJC5BQ9UF47 199 aa26.51■■□□□ 1.83
SLC4A3-206ENST00000416910 TRIM41Q8WV44 630 aa26.36■■□□□ 1.81
SLC4A3-206ENST00000416910 CCDC88BA6NC98 1476 aa26.36■■□□□ 1.81
SLC4A3-206ENST00000416910 LOC105371045A0A1W2PR82 267 aa26.15■■□□□ 1.78
SLC4A3-206ENST00000416910 CFTRP13569 1480 aa25.96■■□□□ 1.75
SLC4A3-206ENST00000416910 CADPSQ9ULU8 1353 aa25.95■■□□□ 1.75
SLC4A3-206ENST00000416910 NESP48681 1621 aa25.87■■□□□ 1.73
SLC4A3-206ENST00000416910 LAMC3Q9Y6N6 1575 aa25.87■■□□□ 1.73
SLC4A3-206ENST00000416910 ABCC8Q09428 1581 aa25.85■■□□□ 1.73
SLC4A3-206ENST00000416910 PRDM2Q13029 1718 aa25.84■■□□□ 1.73
SLC4A3-206ENST00000416910 FAM9AQ8IZU1 332 aaPredicted RBP25.81■■□□□ 1.72
SLC4A3-206ENST00000416910 EEA1Q15075 1411 aa25.69■■□□□ 1.7
SLC4A3-206ENST00000416910 FANCD2Q9BXW9 1451 aa25.68■■□□□ 1.7
SLC4A3-206ENST00000416910 WRNQ14191 1432 aaPredicted RBP eCLIP25.67■■□□□ 1.7
SLC4A3-206ENST00000416910 PDS5BQ9NTI5 1447 aa25.66■■□□□ 1.7
SLC4A3-206ENST00000416910 PCGF6Q9BYE7 350 aa25.6■■□□□ 1.69
SLC4A3-206ENST00000416910 KIF21AQ7Z4S6 1674 aa25.59■■□□□ 1.69
SLC4A3-206ENST00000416910 CEP164Q9UPV0 1460 aa25.58■■□□□ 1.68
SLC4A3-206ENST00000416910 TRIM26Q12899 539 aaPredicted RBP25.52■■□□□ 1.68
SLC4A3-206ENST00000416910 SOGA1O94964 1423 aa25.52■■□□□ 1.68
SLC4A3-206ENST00000416910 SYNJ1O43426 1573 aa25.51■■□□□ 1.67
SLC4A3-206ENST00000416910 ERCC6Q03468 1493 aa25.47■■□□□ 1.67
SLC4A3-206ENST00000416910 CUX1P39880 1505 aa25.46■■□□□ 1.67
SLC4A3-206ENST00000416910 CSRNP3Q8WYN3 585 aa25.45■■□□□ 1.67
SLC4A3-206ENST00000416910 TOP2BQ02880 1626 aa25.42■■□□□ 1.66
SLC4A3-206ENST00000416910 BIVM-ERCC5R4GMW8 1640 aa25.41■■□□□ 1.66
SLC4A3-206ENST00000416910 HRCP23327 699 aa25.4■■□□□ 1.66
SLC4A3-206ENST00000416910 URB2Q14146 1524 aaKnown RBP25.38■■□□□ 1.65
SLC4A3-206ENST00000416910 DNMBPQ6XZF7 1577 aa25.38■■□□□ 1.65
SLC4A3-206ENST00000416910 RUSC2Q8N2Y8 1516 aa25.37■■□□□ 1.65
SLC4A3-206ENST00000416910 TNIKQ9UKE5 1360 aa25.37■■□□□ 1.65
SLC4A3-206ENST00000416910 MRC2Q9UBG0 1479 aa25.36■■□□□ 1.65
SLC4A3-206ENST00000416910 EHMT2Q96KQ7 1210 aa25.36■■□□□ 1.65
SLC4A3-206ENST00000416910 TOPBP1Q92547 1522 aa25.35■■□□□ 1.65
SLC4A3-206ENST00000416910 GOLGA3Q08378 1498 aa25.3■■□□□ 1.64
SLC4A3-206ENST00000416910 THOC2Q8NI27 1593 aaKnown RBP25.28■■□□□ 1.64
SLC4A3-206ENST00000416910 KIF21BO75037 1637 aa25.27■■□□□ 1.64
SLC4A3-206ENST00000416910 WDR62O43379 1518 aa25.25■■□□□ 1.63
SLC4A3-206ENST00000416910 FGD5Q6ZNL6 1462 aa25.25■■□□□ 1.63
SLC4A3-206ENST00000416910 CEP162Q5TB80 1403 aa25.23■■□□□ 1.63
SLC4A3-206ENST00000416910 POLA1P09884 1462 aaPredicted RBP25.19■■□□□ 1.62
SLC4A3-206ENST00000416910 UBTFP17480 764 aaKnown RBP25.13■■□□□ 1.61
SLC4A3-206ENST00000416910 RAD54L2Q9Y4B4 1467 aa25.09■■□□□ 1.61
SLC4A3-206ENST00000416910 CUX2O14529 1486 aa25.05■■□□□ 1.6
SLC4A3-206ENST00000416910 TARBP1Q13395 1621 aaKnown RBP25.02■■□□□ 1.6
SLC4A3-206ENST00000416910 ABCA10Q8WWZ4 1543 aa25.02■■□□□ 1.6
SLC4A3-206ENST00000416910 ERICH3Q5RHP9 1530 aa25.01■■□□□ 1.59
SLC4A3-206ENST00000416910 WDR97A6NE52 1622 aa25■■□□□ 1.59
SLC4A3-206ENST00000416910 KIF27Q86VH2 1401 aa24.98■■□□□ 1.59
SLC4A3-206ENST00000416910 IFT140Q96RY7 1462 aa24.98■■□□□ 1.59
SLC4A3-206ENST00000416910 PRXQ9BXM0 1461 aa24.98■■□□□ 1.59
SLC4A3-206ENST00000416910 RAPGEF2Q9Y4G8 1499 aa24.98■■□□□ 1.59
SLC4A3-206ENST00000416910 CLIP1P30622 1438 aa24.9■■□□□ 1.58
SLC4A3-206ENST00000416910 TDRD9Q8NDG6 1382 aaKnown RBP24.89■■□□□ 1.57
SLC4A3-206ENST00000416910 ZEB1P37275 1124 aaPredicted RBP24.87■■□□□ 1.57
SLC4A3-206ENST00000416910 ABCA5Q8WWZ7 1642 aa24.86■■□□□ 1.57
SLC4A3-206ENST00000416910 ZNF608Q9ULD9 1512 aaPredicted RBP24.85■■□□□ 1.57
SLC4A3-206ENST00000416910 GAPVD1Q14C86 1478 aa24.82■■□□□ 1.56
SLC4A3-206ENST00000416910 AQRO60306 1485 aaKnown RBP eCLIP24.81■■□□□ 1.56
SLC4A3-206ENST00000416910 VPS8Q8N3P4 1428 aa24.79■■□□□ 1.56
SLC4A3-206ENST00000416910 PPARGC1BQ86YN6 1023 aaKnown RBP24.79■■□□□ 1.56
SLC4A3-206ENST00000416910 EIF4G3O43432 1585 aaKnown RBP24.78■■□□□ 1.56
SLC4A3-206ENST00000416910 IGF1RP08069 1367 aa24.76■■□□□ 1.55
SLC4A3-206ENST00000416910 PBRM1Q86U86 1689 aa24.74■■□□□ 1.55
SLC4A3-206ENST00000416910 GRIN2BQ13224 1484 aa24.7■■□□□ 1.54
SLC4A3-206ENST00000416910 CUL7Q14999 1698 aa24.65■■□□□ 1.54
SLC4A3-206ENST00000416910 CARMIL1Q5VZK9 1371 aa24.64■■□□□ 1.54
SLC4A3-206ENST00000416910 SNAPC4Q5SXM2 1469 aa24.59■■□□□ 1.53
SLC4A3-206ENST00000416910 ADAMTS12P58397 1594 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms