RNA–Protein interactions for RNA: ENST00000416789.1

ITGA6-205, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 853 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-205ENST00000416789 AEBP2Q6ZN18 517 aaPredicted RBP23.24■■□□□ 1.31
ITGA6-205ENST00000416789 CHIC1Q5VXU3 224 aa22.43■■□□□ 1.18
ITGA6-205ENST00000416789 NISCHQ9Y2I1 1504 aa20.65■□□□□ 0.9
ITGA6-205ENST00000416789 SENP3Q9H4L4 574 aaPredicted RBP19.79■□□□□ 0.76
ITGA6-205ENST00000416789 PHF23Q9BUL5 403 aaPredicted RBP19.68■□□□□ 0.74
ITGA6-205ENST00000416789 CCDC180Q9P1Z9 1646 aa18.47■□□□□ 0.55
ITGA6-205ENST00000416789 FOXD1Q16676 465 aa18.39■□□□□ 0.53
ITGA6-205ENST00000416789 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
ITGA6-205ENST00000416789 ABCC9O60706 1549 aa17.76■□□□□ 0.43
ITGA6-205ENST00000416789 PPP6R1Q9UPN7 881 aa17.46■□□□□ 0.39
ITGA6-205ENST00000416789 ADRA2BP18089 450 aa17.44■□□□□ 0.38
ITGA6-205ENST00000416789 NACADO15069 1562 aa17.32■□□□□ 0.36
ITGA6-205ENST00000416789 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
ITGA6-205ENST00000416789 PIAS4Q8N2W9 510 aaPredicted RBP17.29■□□□□ 0.36
ITGA6-205ENST00000416789 MYO15BQ96JP2 1530 aa17.29■□□□□ 0.36
ITGA6-205ENST00000416789 ZCCHC6Q5VYS8 1495 aaKnown RBP17.22■□□□□ 0.35
ITGA6-205ENST00000416789 DCAF1Q9Y4B6 1507 aa17.21■□□□□ 0.34
ITGA6-205ENST00000416789 MSH5O43196 834 aa17.1■□□□□ 0.33
ITGA6-205ENST00000416789 DCAF8L2P0C7V8 631 aa17.05■□□□□ 0.32
ITGA6-205ENST00000416789 UNC13AQ9UPW8 1703 aa16.89■□□□□ 0.29
ITGA6-205ENST00000416789 SHROOM4Q9ULL8 1493 aa16.71■□□□□ 0.27
ITGA6-205ENST00000416789 BICRAQ9NZM4 1560 aa16.67■□□□□ 0.26
ITGA6-205ENST00000416789 SCRIBQ14160 1630 aa16.66■□□□□ 0.26
ITGA6-205ENST00000416789 PABPN1Q86U42 306 aaKnown RBP eCLIP16.53■□□□□ 0.24
ITGA6-205ENST00000416789 EIF4G1Q04637 1599 aaKnown RBP16.26■□□□□ 0.19
ITGA6-205ENST00000416789 CC2D2AQ9P2K1 1620 aa16.16■□□□□ 0.18
ITGA6-205ENST00000416789 DNAJC5BQ9UF47 199 aa16.15■□□□□ 0.18
ITGA6-205ENST00000416789 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
ITGA6-205ENST00000416789 BAZ1AQ9NRL2 1556 aaPredicted RBP16.05■□□□□ 0.16
ITGA6-205ENST00000416789 SMARCA4P51532 1647 aa16.02■□□□□ 0.16
ITGA6-205ENST00000416789 CECR2Q9BXF3 1484 aa16.02■□□□□ 0.15
ITGA6-205ENST00000416789 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
ITGA6-205ENST00000416789 SMARCA2P51531 1590 aa15.96■□□□□ 0.15
ITGA6-205ENST00000416789 PEG3Q9GZU2 1588 aa15.93■□□□□ 0.14
ITGA6-205ENST00000416789 NCAPD3P42695 1498 aa15.91■□□□□ 0.14
ITGA6-205ENST00000416789 MAPK8IP2Q13387 824 aaPredicted RBP15.91■□□□□ 0.14
ITGA6-205ENST00000416789 PPP4R3CPQ6ZMV5 832 aa15.91■□□□□ 0.14
ITGA6-205ENST00000416789 ATAD2BQ9ULI0 1458 aa15.89■□□□□ 0.13
ITGA6-205ENST00000416789 HMGXB3Q12766 1538 aa15.89■□□□□ 0.13
ITGA6-205ENST00000416789 MROH2BQ7Z745 1585 aa15.83■□□□□ 0.13
ITGA6-205ENST00000416789 BAZ1BQ9UIG0 1483 aaKnown RBP15.77■□□□□ 0.11
ITGA6-205ENST00000416789 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
ITGA6-205ENST00000416789 WIZO95785 1651 aa15.7■□□□□ 0.1
ITGA6-205ENST00000416789 RSF1Q96T23 1441 aaPredicted RBP15.69■□□□□ 0.1
ITGA6-205ENST00000416789 TOP2AP11388 1531 aaKnown RBP15.6■□□□□ 0.09
ITGA6-205ENST00000416789 LAMC3Q9Y6N6 1575 aa15.53■□□□□ 0.08
ITGA6-205ENST00000416789 CNKSR2Q8WXI2 1034 aa15.53■□□□□ 0.08
ITGA6-205ENST00000416789 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
ITGA6-205ENST00000416789 CADPSQ9ULU8 1353 aa15.42■□□□□ 0.06
ITGA6-205ENST00000416789 PRDM2Q13029 1718 aa15.4■□□□□ 0.06
ITGA6-205ENST00000416789 PDS5BQ9NTI5 1447 aa15.4■□□□□ 0.06
ITGA6-205ENST00000416789 ERCC6Q03468 1493 aa15.38■□□□□ 0.05
ITGA6-205ENST00000416789 NESP48681 1621 aa15.36■□□□□ 0.05
ITGA6-205ENST00000416789 CFTRP13569 1480 aa15.36■□□□□ 0.05
ITGA6-205ENST00000416789 CCDC88BA6NC98 1476 aa15.34■□□□□ 0.05
ITGA6-205ENST00000416789 KIF21AQ7Z4S6 1674 aa15.31■□□□□ 0.04
ITGA6-205ENST00000416789 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
ITGA6-205ENST00000416789 RNF216Q9NWF9 866 aaPredicted RBP15.3■□□□□ 0.04
ITGA6-205ENST00000416789 CUX2O14529 1486 aa15.28■□□□□ 0.04
ITGA6-205ENST00000416789 THOC2Q8NI27 1593 aaKnown RBP15.24■□□□□ 0.03
ITGA6-205ENST00000416789 CEP164Q9UPV0 1460 aa15.23■□□□□ 0.03
ITGA6-205ENST00000416789 FANCD2Q9BXW9 1451 aa15.22■□□□□ 0.03
ITGA6-205ENST00000416789 SUPT5HO00267 1087 aaKnown RBP15.22■□□□□ 0.03
ITGA6-205ENST00000416789 KCNA4P22459 653 aa15.2■□□□□ 0.02
ITGA6-205ENST00000416789 MRC2Q9UBG0 1479 aa15.2■□□□□ 0.02
ITGA6-205ENST00000416789 NPM3O75607 178 aaKnown RBP15.17■□□□□ 0.02
ITGA6-205ENST00000416789 WDR62O43379 1518 aa15.17■□□□□ 0.02
ITGA6-205ENST00000416789 ABCC8Q09428 1581 aa15.15■□□□□ 0.02
ITGA6-205ENST00000416789 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
ITGA6-205ENST00000416789 DNMBPQ6XZF7 1577 aa15.03■□□□□ -0
ITGA6-205ENST00000416789 URB2Q14146 1524 aaKnown RBP15.03■□□□□ -0
ITGA6-205ENST00000416789 TOPBP1Q92547 1522 aa15□□□□□ -0.01
ITGA6-205ENST00000416789 IFT140Q96RY7 1462 aa14.94□□□□□ -0.02
ITGA6-205ENST00000416789 WDR97A6NE52 1622 aa14.9□□□□□ -0.02
ITGA6-205ENST00000416789 CUX1P39880 1505 aa14.87□□□□□ -0.03
ITGA6-205ENST00000416789 BIVM-ERCC5R4GMW8 1640 aa14.86□□□□□ -0.03
ITGA6-205ENST00000416789 POLA1P09884 1462 aaPredicted RBP14.85□□□□□ -0.03
ITGA6-205ENST00000416789 TOP2BQ02880 1626 aa14.84□□□□□ -0.03
ITGA6-205ENST00000416789 TARBP1Q13395 1621 aaKnown RBP14.84□□□□□ -0.03
ITGA6-205ENST00000416789 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.04
ITGA6-205ENST00000416789 FGD5Q6ZNL6 1462 aa14.82□□□□□ -0.04
ITGA6-205ENST00000416789 SOGA1O94964 1423 aa14.8□□□□□ -0.04
ITGA6-205ENST00000416789 EIF4G3O43432 1585 aaKnown RBP14.77□□□□□ -0.04
ITGA6-205ENST00000416789 SYNJ1O43426 1573 aa14.75□□□□□ -0.05
ITGA6-205ENST00000416789 ABCA10Q8WWZ4 1543 aa14.75□□□□□ -0.05
ITGA6-205ENST00000416789 ZNF608Q9ULD9 1512 aaPredicted RBP14.73□□□□□ -0.05
ITGA6-205ENST00000416789 RAD54L2Q9Y4B4 1467 aa14.72□□□□□ -0.05
ITGA6-205ENST00000416789 ABCA5Q8WWZ7 1642 aa14.68□□□□□ -0.06
ITGA6-205ENST00000416789 PBRM1Q86U86 1689 aa14.68□□□□□ -0.06
ITGA6-205ENST00000416789 AQRO60306 1485 aaKnown RBP eCLIP14.66□□□□□ -0.06
ITGA6-205ENST00000416789 GRIN2BQ13224 1484 aa14.66□□□□□ -0.06
ITGA6-205ENST00000416789 MAGI1Q96QZ7 1491 aaPredicted RBP14.66□□□□□ -0.06
ITGA6-205ENST00000416789 GAPVD1Q14C86 1478 aa14.65□□□□□ -0.06
ITGA6-205ENST00000416789 DNAJC5Q9H3Z4 198 aa14.65□□□□□ -0.06
ITGA6-205ENST00000416789 TDRD9Q8NDG6 1382 aaKnown RBP14.63□□□□□ -0.07
ITGA6-205ENST00000416789 ERICH3Q5RHP9 1530 aa14.61□□□□□ -0.07
ITGA6-205ENST00000416789 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.61□□□□□ -0.07
ITGA6-205ENST00000416789 RNF39Q9H2S5 420 aa14.6□□□□□ -0.07
ITGA6-205ENST00000416789 CHD1O14646 1710 aa14.6□□□□□ -0.07
ITGA6-205ENST00000416789 OSCARQ8IYS5 282 aa14.59□□□□□ -0.07
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