RNA–Protein interactions for RNA: ENST00000416786.5

SMTN-205, Transcript of smoothelin, humanhuman

TSL 5

Gene SMTN, Length 823 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-205ENST00000416786 NISCHQ9Y2I1 1504 aa38.6■■■■□ 3.77
SMTN-205ENST00000416786 CCDC180Q9P1Z9 1646 aa34.01■■■■□ 3.04
SMTN-205ENST00000416786 ABCC9O60706 1549 aa33.18■■■□□ 2.9
SMTN-205ENST00000416786 DCAF8L2P0C7V8 631 aa32.26■■■□□ 2.75
SMTN-205ENST00000416786 ZCCHC6Q5VYS8 1495 aaKnown RBP32.21■■■□□ 2.75
SMTN-205ENST00000416786 NACADO15069 1562 aa32.02■■■□□ 2.72
SMTN-205ENST00000416786 RB1CC1Q8TDY2 1594 aa31.95■■■□□ 2.71
SMTN-205ENST00000416786 MYO15BQ96JP2 1530 aa31.95■■■□□ 2.7
SMTN-205ENST00000416786 DCAF1Q9Y4B6 1507 aa31.92■■■□□ 2.7
SMTN-205ENST00000416786 SCRIBQ14160 1630 aa31.16■■■□□ 2.58
SMTN-205ENST00000416786 PABPN1Q86U42 306 aaKnown RBP eCLIP31.15■■■□□ 2.58
SMTN-205ENST00000416786 DNAJC5BQ9UF47 199 aa31.07■■■□□ 2.56
SMTN-205ENST00000416786 UNC13AQ9UPW8 1703 aa31.05■■■□□ 2.56
SMTN-205ENST00000416786 BICRAQ9NZM4 1560 aa30.99■■■□□ 2.55
SMTN-205ENST00000416786 SHROOM4Q9ULL8 1493 aa30.76■■■□□ 2.52
SMTN-205ENST00000416786 EIF4G1Q04637 1599 aaKnown RBP30.16■■■□□ 2.42
SMTN-205ENST00000416786 CECR2Q9BXF3 1484 aa30.08■■■□□ 2.41
SMTN-205ENST00000416786 CC2D2AQ9P2K1 1620 aa29.94■■■□□ 2.38
SMTN-205ENST00000416786 BAZ1AQ9NRL2 1556 aaPredicted RBP29.86■■■□□ 2.37
SMTN-205ENST00000416786 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
SMTN-205ENST00000416786 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
SMTN-205ENST00000416786 ATAD2BQ9ULI0 1458 aa29.68■■■□□ 2.34
SMTN-205ENST00000416786 NCAPD3P42695 1498 aa29.62■■■□□ 2.33
SMTN-205ENST00000416786 RSF1Q96T23 1441 aaPredicted RBP29.59■■■□□ 2.33
SMTN-205ENST00000416786 SMARCA2P51531 1590 aa29.59■■■□□ 2.33
SMTN-205ENST00000416786 PEG3Q9GZU2 1588 aa29.53■■■□□ 2.32
SMTN-205ENST00000416786 BAZ1BQ9UIG0 1483 aaKnown RBP29.42■■■□□ 2.3
SMTN-205ENST00000416786 HMGXB3Q12766 1538 aa29.41■■■□□ 2.3
SMTN-205ENST00000416786 WIZO95785 1651 aa29.37■■■□□ 2.29
SMTN-205ENST00000416786 SUPT5HO00267 1087 aaKnown RBP29.14■■■□□ 2.26
SMTN-205ENST00000416786 TOP2AP11388 1531 aaKnown RBP29.12■■■□□ 2.25
SMTN-205ENST00000416786 DNAJC5Q9H3Z4 198 aa28.9■■■□□ 2.22
SMTN-205ENST00000416786 CCDC88BA6NC98 1476 aa28.85■■■□□ 2.21
SMTN-205ENST00000416786 CADPSQ9ULU8 1353 aa28.81■■■□□ 2.2
SMTN-205ENST00000416786 NESP48681 1621 aa28.8■■■□□ 2.2
SMTN-205ENST00000416786 LAMC3Q9Y6N6 1575 aa28.69■■■□□ 2.18
SMTN-205ENST00000416786 CFTRP13569 1480 aa28.66■■■□□ 2.18
SMTN-205ENST00000416786 PDS5BQ9NTI5 1447 aa28.59■■■□□ 2.17
SMTN-205ENST00000416786 ERCC6Q03468 1493 aa28.56■■■□□ 2.16
SMTN-205ENST00000416786 FANCD2Q9BXW9 1451 aa28.43■■■□□ 2.14
SMTN-205ENST00000416786 CEP164Q9UPV0 1460 aa28.34■■■□□ 2.13
SMTN-205ENST00000416786 KIF21AQ7Z4S6 1674 aa28.29■■■□□ 2.12
SMTN-205ENST00000416786 MRC2Q9UBG0 1479 aa28.24■■■□□ 2.11
SMTN-205ENST00000416786 CUX2O14529 1486 aa28.19■■■□□ 2.1
SMTN-205ENST00000416786 THOC2Q8NI27 1593 aaKnown RBP28.19■■■□□ 2.1
SMTN-205ENST00000416786 PRDM2Q13029 1718 aa28.17■■■□□ 2.1
SMTN-205ENST00000416786 URB2Q14146 1524 aaKnown RBP28.11■■■□□ 2.09
SMTN-205ENST00000416786 WDR62O43379 1518 aa28.1■■■□□ 2.09
SMTN-205ENST00000416786 ABCC8Q09428 1581 aa27.99■■■□□ 2.07
SMTN-205ENST00000416786 TOPBP1Q92547 1522 aa27.99■■■□□ 2.07
SMTN-205ENST00000416786 DNMBPQ6XZF7 1577 aa27.94■■■□□ 2.06
SMTN-205ENST00000416786 CUX1P39880 1505 aa27.89■■■□□ 2.06
SMTN-205ENST00000416786 WRNQ14191 1432 aaPredicted RBP eCLIP27.87■■■□□ 2.05
SMTN-205ENST00000416786 POLA1P09884 1462 aaPredicted RBP27.78■■■□□ 2.04
SMTN-205ENST00000416786 FGD5Q6ZNL6 1462 aa27.76■■■□□ 2.03
SMTN-205ENST00000416786 IFT140Q96RY7 1462 aa27.76■■■□□ 2.03
SMTN-205ENST00000416786 SOGA1O94964 1423 aa27.73■■■□□ 2.03
SMTN-205ENST00000416786 SYNJ1O43426 1573 aa27.7■■■□□ 2.03
SMTN-205ENST00000416786 RAD54L2Q9Y4B4 1467 aa27.7■■■□□ 2.02
SMTN-205ENST00000416786 TOP2BQ02880 1626 aa27.68■■■□□ 2.02
SMTN-205ENST00000416786 BIVM-ERCC5R4GMW8 1640 aa27.63■■■□□ 2.01
SMTN-205ENST00000416786 ZNF608Q9ULD9 1512 aaPredicted RBP27.62■■■□□ 2.01
SMTN-205ENST00000416786 TARBP1Q13395 1621 aaKnown RBP27.59■■■□□ 2.01
SMTN-205ENST00000416786 TDRD9Q8NDG6 1382 aaKnown RBP27.55■■■□□ 2
SMTN-205ENST00000416786 AQRO60306 1485 aaKnown RBP eCLIP27.52■■■□□ 21e-7■■■□□ 18.8
SMTN-205ENST00000416786 ABCA10Q8WWZ4 1543 aa27.51■■□□□ 1.99
SMTN-205ENST00000416786 TRIM41Q8WV44 630 aa27.5■■□□□ 1.99
SMTN-205ENST00000416786 EIF4G3O43432 1585 aaKnown RBP27.4■■□□□ 1.98
SMTN-205ENST00000416786 CHIC1Q5VXU3 224 aa27.38■■□□□ 1.97
SMTN-205ENST00000416786 GAPVD1Q14C86 1478 aa27.38■■□□□ 1.97
SMTN-205ENST00000416786 WDR97A6NE52 1622 aa27.37■■□□□ 1.97
SMTN-205ENST00000416786 GRIN2BQ13224 1484 aa27.32■■□□□ 1.96
SMTN-205ENST00000416786 ABCA5Q8WWZ7 1642 aa27.28■■□□□ 1.96
SMTN-205ENST00000416786 KIF27Q86VH2 1401 aa27.27■■□□□ 1.96
SMTN-205ENST00000416786 SNAPC4Q5SXM2 1469 aa27.25■■□□□ 1.95
SMTN-205ENST00000416786 MAGI1Q96QZ7 1491 aaPredicted RBP27.19■■□□□ 1.94
SMTN-205ENST00000416786 FBLN2P98095 1184 aa27.18■■□□□ 1.94
SMTN-205ENST00000416786 IGF1RP08069 1367 aa27.18■■□□□ 1.94
SMTN-205ENST00000416786 CHMP7Q8WUX9 453 aaPredicted RBP27.15■■□□□ 1.94
SMTN-205ENST00000416786 ERICH3Q5RHP9 1530 aa27.15■■□□□ 1.94
SMTN-205ENST00000416786 RUSC2Q8N2Y8 1516 aa27.13■■□□□ 1.93
SMTN-205ENST00000416786 OSCARQ8IYS5 282 aa27.12■■□□□ 1.93
SMTN-205ENST00000416786 PBRM1Q86U86 1689 aa27.11■■□□□ 1.93
SMTN-205ENST00000416786 SYNJ2O15056 1496 aa27.1■■□□□ 1.93
SMTN-205ENST00000416786 FHAD1B1AJZ9 1412 aa27.08■■□□□ 1.93
SMTN-205ENST00000416786 ADAMTS12P58397 1594 aa27.02■■□□□ 1.92
SMTN-205ENST00000416786 CARMIL1Q5VZK9 1371 aa27■■□□□ 1.91
SMTN-205ENST00000416786 GRIN2AQ12879 1464 aa26.95■■□□□ 1.91
SMTN-205ENST00000416786 CSRNP3Q8WYN3 585 aa26.95■■□□□ 1.9
SMTN-205ENST00000416786 EEA1Q15075 1411 aa26.94■■□□□ 1.9
SMTN-205ENST00000416786 FAM9AQ8IZU1 332 aaPredicted RBP26.94■■□□□ 1.9
SMTN-205ENST00000416786 CHD1O14646 1710 aa26.92■■□□□ 1.9
SMTN-205ENST00000416786 CUL7Q14999 1698 aa26.89■■□□□ 1.89
SMTN-205ENST00000416786 NUP160Q12769 1436 aa26.85■■□□□ 1.89
SMTN-205ENST00000416786 PRXQ9BXM0 1461 aa26.83■■□□□ 1.89
SMTN-205ENST00000416786 RAPGEF2Q9Y4G8 1499 aa26.83■■□□□ 1.89
SMTN-205ENST00000416786 CEP170Q5SW79 1584 aa26.77■■□□□ 1.88
SMTN-205ENST00000416786 CLASP1Q7Z460 1538 aa26.76■■□□□ 1.87
SMTN-205ENST00000416786 KIAA0586Q9BVV6 1533 aa26.67■■□□□ 1.86
SMTN-205ENST00000416786 JPH4Q96JJ6 628 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms