RNA–Protein interactions for RNA: ENST00000415430.7

VSIG1-202, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VSIG1, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-202ENST00000415430 NISCHQ9Y2I1 1504 aa19.21■□□□□ 0.67
VSIG1-202ENST00000415430 CCDC180Q9P1Z9 1646 aa17.57■□□□□ 0.4
VSIG1-202ENST00000415430 CHIC1Q5VXU3 224 aa16.73■□□□□ 0.27
VSIG1-202ENST00000415430 AEBP2Q6ZN18 517 aaPredicted RBP16.56■□□□□ 0.24
VSIG1-202ENST00000415430 MYO15BQ96JP2 1530 aa16.53■□□□□ 0.24
VSIG1-202ENST00000415430 DCAF1Q9Y4B6 1507 aa16.52■□□□□ 0.24
VSIG1-202ENST00000415430 ZCCHC6Q5VYS8 1495 aaKnown RBP16.27■□□□□ 0.19
VSIG1-202ENST00000415430 NACADO15069 1562 aa16.01■□□□□ 0.15
VSIG1-202ENST00000415430 UNC13AQ9UPW8 1703 aa15.86■□□□□ 0.13
VSIG1-202ENST00000415430 SHROOM4Q9ULL8 1493 aa15.76■□□□□ 0.11
VSIG1-202ENST00000415430 RB1CC1Q8TDY2 1594 aa15.74■□□□□ 0.11
VSIG1-202ENST00000415430 BICRAQ9NZM4 1560 aa15.45■□□□□ 0.06
VSIG1-202ENST00000415430 PELP1Q8IZL8 1130 aaKnown RBP15.41■□□□□ 0.06
VSIG1-202ENST00000415430 ABCC9O60706 1549 aa15.32■□□□□ 0.04
VSIG1-202ENST00000415430 MYT1Q01538 1121 aa15.29■□□□□ 0.04
VSIG1-202ENST00000415430 PEG3Q9GZU2 1588 aa15.22■□□□□ 0.03
VSIG1-202ENST00000415430 PHF23Q9BUL5 403 aaPredicted RBP15.18■□□□□ 0.02
VSIG1-202ENST00000415430 SCRIBQ14160 1630 aa15.09■□□□□ 0.01
VSIG1-202ENST00000415430 SMARCA4P51532 1647 aa14.93□□□□□ -0.02
VSIG1-202ENST00000415430 SMARCA2P51531 1590 aa14.92□□□□□ -0.02
VSIG1-202ENST00000415430 BAZ1AQ9NRL2 1556 aaPredicted RBP14.88□□□□□ -0.03
VSIG1-202ENST00000415430 PRDM2Q13029 1718 aa14.86□□□□□ -0.03
VSIG1-202ENST00000415430 HMGXB3Q12766 1538 aa14.83□□□□□ -0.04
VSIG1-202ENST00000415430 TTBK1Q5TCY1 1321 aaPredicted RBP14.75□□□□□ -0.05
VSIG1-202ENST00000415430 EIF4G1Q04637 1599 aaKnown RBP14.74□□□□□ -0.05
VSIG1-202ENST00000415430 TOP2AP11388 1531 aaKnown RBP14.65□□□□□ -0.06
VSIG1-202ENST00000415430 MROH2BQ7Z745 1585 aa14.61□□□□□ -0.07
VSIG1-202ENST00000415430 NCAPD3P42695 1498 aa14.58□□□□□ -0.08
VSIG1-202ENST00000415430 WIZO95785 1651 aa14.55□□□□□ -0.08
VSIG1-202ENST00000415430 RSF1Q96T23 1441 aaPredicted RBP14.53□□□□□ -0.08
VSIG1-202ENST00000415430 CECR2Q9BXF3 1484 aa14.51□□□□□ -0.09
VSIG1-202ENST00000415430 CC2D2AQ9P2K1 1620 aa14.5□□□□□ -0.09
VSIG1-202ENST00000415430 ATAD2BQ9ULI0 1458 aa14.48□□□□□ -0.09
VSIG1-202ENST00000415430 SLC24A1O60721 1099 aa14.45□□□□□ -0.1
VSIG1-202ENST00000415430 PRKCSHP14314 528 aaPredicted RBP14.44□□□□□ -0.1
VSIG1-202ENST00000415430 LAMC3Q9Y6N6 1575 aa14.26□□□□□ -0.13
VSIG1-202ENST00000415430 ERICH6Q7L0X2 663 aa14.26□□□□□ -0.13
VSIG1-202ENST00000415430 BIVM-ERCC5R4GMW8 1640 aa14.25□□□□□ -0.13
VSIG1-202ENST00000415430 WDR97A6NE52 1622 aa14.2□□□□□ -0.14
VSIG1-202ENST00000415430 BAZ1BQ9UIG0 1483 aaKnown RBP14.19□□□□□ -0.14
VSIG1-202ENST00000415430 CFTRP13569 1480 aa14.13□□□□□ -0.15
VSIG1-202ENST00000415430 CCDC88BA6NC98 1476 aa14.11□□□□□ -0.15
VSIG1-202ENST00000415430 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
VSIG1-202ENST00000415430 APLP2Q06481 763 aa14.08□□□□□ -0.16
VSIG1-202ENST00000415430 THOC2Q8NI27 1593 aaKnown RBP14.04□□□□□ -0.16
VSIG1-202ENST00000415430 KIF21AQ7Z4S6 1674 aa14.01□□□□□ -0.17
VSIG1-202ENST00000415430 TOP2BQ02880 1626 aa14.01□□□□□ -0.17
VSIG1-202ENST00000415430 WDR62O43379 1518 aa13.96□□□□□ -0.18
VSIG1-202ENST00000415430 BCL11AQ9H165 835 aa13.91□□□□□ -0.18
VSIG1-202ENST00000415430 PLPPR3Q6T4P5 718 aa13.91□□□□□ -0.18
VSIG1-202ENST00000415430 PABPN1Q86U42 306 aaKnown RBP eCLIP13.9□□□□□ -0.18
VSIG1-202ENST00000415430 DNMBPQ6XZF7 1577 aa13.9□□□□□ -0.18
VSIG1-202ENST00000415430 DCAF8L2P0C7V8 631 aa13.9□□□□□ -0.18
VSIG1-202ENST00000415430 ABCC8Q09428 1581 aa13.86□□□□□ -0.19
VSIG1-202ENST00000415430 DNAJC5Q9H3Z4 198 aa13.86□□□□□ -0.19
VSIG1-202ENST00000415430 TARBP1Q13395 1621 aaKnown RBP13.85□□□□□ -0.19
VSIG1-202ENST00000415430 ABCA5Q8WWZ7 1642 aa13.82□□□□□ -0.2
VSIG1-202ENST00000415430 CADPSQ9ULU8 1353 aa13.82□□□□□ -0.2
VSIG1-202ENST00000415430 SYNJ1O43426 1573 aa13.8□□□□□ -0.2
VSIG1-202ENST00000415430 CUX1P39880 1505 aa13.77□□□□□ -0.21
VSIG1-202ENST00000415430 HRCP23327 699 aa13.73□□□□□ -0.21
VSIG1-202ENST00000415430 PBRM1Q86U86 1689 aa13.73□□□□□ -0.21
VSIG1-202ENST00000415430 DAXXQ9UER7 740 aaPredicted RBP13.71□□□□□ -0.22
VSIG1-202ENST00000415430 CUL7Q14999 1698 aa13.68□□□□□ -0.22
VSIG1-202ENST00000415430 MRC2Q9UBG0 1479 aa13.68□□□□□ -0.22
VSIG1-202ENST00000415430 URB2Q14146 1524 aaKnown RBP13.67□□□□□ -0.22
VSIG1-202ENST00000415430 FAM9AQ8IZU1 332 aaPredicted RBP13.67□□□□□ -0.22
VSIG1-202ENST00000415430 KIF21BO75037 1637 aa13.67□□□□□ -0.22
VSIG1-202ENST00000415430 KCNA4P22459 653 aa13.66□□□□□ -0.22
VSIG1-202ENST00000415430 FANCD2Q9BXW9 1451 aa13.66□□□□□ -0.22
VSIG1-202ENST00000415430 ABCA10Q8WWZ4 1543 aa13.65□□□□□ -0.22
VSIG1-202ENST00000415430 SCAF1Q9H7N4 1312 aaKnown RBP13.65□□□□□ -0.22
VSIG1-202ENST00000415430 TOPBP1Q92547 1522 aa13.65□□□□□ -0.22
VSIG1-202ENST00000415430 CEP164Q9UPV0 1460 aa13.63□□□□□ -0.23
VSIG1-202ENST00000415430 PDS5BQ9NTI5 1447 aa13.63□□□□□ -0.23
VSIG1-202ENST00000415430 CUX2O14529 1486 aa13.62□□□□□ -0.23
VSIG1-202ENST00000415430 ERICH3Q5RHP9 1530 aa13.6□□□□□ -0.23
VSIG1-202ENST00000415430 ADRA2BP18089 450 aa13.6□□□□□ -0.23
VSIG1-202ENST00000415430 EEA1Q15075 1411 aa13.57□□□□□ -0.24
VSIG1-202ENST00000415430 NESP48681 1621 aa13.56□□□□□ -0.24
VSIG1-202ENST00000415430 DNAJC5BQ9UF47 199 aa13.55□□□□□ -0.24
VSIG1-202ENST00000415430 CTTNBP2Q8WZ74 1663 aa13.54□□□□□ -0.24
VSIG1-202ENST00000415430 WRNQ14191 1432 aaPredicted RBP eCLIP13.52□□□□□ -0.25
VSIG1-202ENST00000415430 ADAMTS12P58397 1594 aa13.5□□□□□ -0.25
VSIG1-202ENST00000415430 POLA1P09884 1462 aaPredicted RBP13.5□□□□□ -0.25
VSIG1-202ENST00000415430 IFT140Q96RY7 1462 aa13.5□□□□□ -0.25
VSIG1-202ENST00000415430 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
VSIG1-202ENST00000415430 SHROOM2Q13796 1616 aa13.48□□□□□ -0.25
VSIG1-202ENST00000415430 SUPT5HO00267 1087 aaKnown RBP13.46□□□□□ -0.26
VSIG1-202ENST00000415430 FGD5Q6ZNL6 1462 aa13.45□□□□□ -0.26
VSIG1-202ENST00000415430 EIF5BO60841 1220 aaKnown RBP13.43□□□□□ -0.26
VSIG1-202ENST00000415430 CENPBP07199 599 aaPredicted RBP13.42□□□□□ -0.26
VSIG1-202ENST00000415430 PRXQ9BXM0 1461 aa13.41□□□□□ -0.26
VSIG1-202ENST00000415430 SAMD9Q5K651 1589 aa13.37□□□□□ -0.27
VSIG1-202ENST00000415430 SENP3Q9H4L4 574 aaPredicted RBP13.35□□□□□ -0.27
VSIG1-202ENST00000415430 MAGI1Q96QZ7 1491 aaPredicted RBP13.34□□□□□ -0.27
VSIG1-202ENST00000415430 RUSC2Q8N2Y8 1516 aa13.33□□□□□ -0.28
VSIG1-202ENST00000415430 CLASP1Q7Z460 1538 aa13.32□□□□□ -0.28
VSIG1-202ENST00000415430 CSRNP3Q8WYN3 585 aa13.32□□□□□ -0.28
VSIG1-202ENST00000415430 CHD1O14646 1710 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms