RNA–Protein interactions for RNA: ENST00000414306.5

SBDS-202, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-202ENST00000414306 NISCHQ9Y2I1 1504 aa42.29■■■■■ 4.36
SBDS-202ENST00000414306 CCDC180Q9P1Z9 1646 aa37.43■■■■□ 3.58
SBDS-202ENST00000414306 ABCC9O60706 1549 aa36.34■■■■□ 3.41
SBDS-202ENST00000414306 ZCCHC6Q5VYS8 1495 aaKnown RBP35.32■■■■□ 3.24
SBDS-202ENST00000414306 DCAF8L2P0C7V8 631 aa35.31■■■■□ 3.24
SBDS-202ENST00000414306 NACADO15069 1562 aa35.05■■■■□ 3.2
SBDS-202ENST00000414306 RB1CC1Q8TDY2 1594 aa35.04■■■■□ 3.2
SBDS-202ENST00000414306 DCAF1Q9Y4B6 1507 aa34.91■■■■□ 3.18
SBDS-202ENST00000414306 MYO15BQ96JP2 1530 aa34.87■■■■□ 3.17
SBDS-202ENST00000414306 UNC13AQ9UPW8 1703 aa34.4■■■■□ 3.1
SBDS-202ENST00000414306 SCRIBQ14160 1630 aa34.32■■■■□ 3.08
SBDS-202ENST00000414306 PABPN1Q86U42 306 aaKnown RBP eCLIP34.03■■■■□ 3.04
SBDS-202ENST00000414306 BICRAQ9NZM4 1560 aa34■■■■□ 3.03
SBDS-202ENST00000414306 SHROOM4Q9ULL8 1493 aa33.84■■■■□ 3.01
SBDS-202ENST00000414306 EIF4G1Q04637 1599 aaKnown RBP33.07■■■□□ 2.88
SBDS-202ENST00000414306 CECR2Q9BXF3 1484 aa32.97■■■□□ 2.87
SBDS-202ENST00000414306 DNAJC5BQ9UF47 199 aa32.94■■■□□ 2.86
SBDS-202ENST00000414306 CC2D2AQ9P2K1 1620 aa32.87■■■□□ 2.85
SBDS-202ENST00000414306 SMARCA4P51532 1647 aa32.78■■■□□ 2.84
SBDS-202ENST00000414306 BAZ1AQ9NRL2 1556 aaPredicted RBP32.75■■■□□ 2.83
SBDS-202ENST00000414306 MROH2BQ7Z745 1585 aa32.66■■■□□ 2.82
SBDS-202ENST00000414306 ATAD2BQ9ULI0 1458 aa32.45■■■□□ 2.79
SBDS-202ENST00000414306 SMARCA2P51531 1590 aa32.42■■■□□ 2.78
SBDS-202ENST00000414306 WIZO95785 1651 aa32.39■■■□□ 2.78
SBDS-202ENST00000414306 RSF1Q96T23 1441 aaPredicted RBP32.38■■■□□ 2.77
SBDS-202ENST00000414306 PEG3Q9GZU2 1588 aa32.36■■■□□ 2.77
SBDS-202ENST00000414306 NCAPD3P42695 1498 aa32.3■■■□□ 2.76
SBDS-202ENST00000414306 BAZ1BQ9UIG0 1483 aaKnown RBP32.24■■■□□ 2.75
SBDS-202ENST00000414306 HMGXB3Q12766 1538 aa32.22■■■□□ 2.75
SBDS-202ENST00000414306 SUPT5HO00267 1087 aaKnown RBP31.99■■■□□ 2.71
SBDS-202ENST00000414306 TOP2AP11388 1531 aaKnown RBP31.98■■■□□ 2.71
SBDS-202ENST00000414306 CCDC88BA6NC98 1476 aa31.61■■■□□ 2.65
SBDS-202ENST00000414306 NESP48681 1621 aa31.57■■■□□ 2.64
SBDS-202ENST00000414306 LAMC3Q9Y6N6 1575 aa31.44■■■□□ 2.62
SBDS-202ENST00000414306 CADPSQ9ULU8 1353 aa31.42■■■□□ 2.62
SBDS-202ENST00000414306 CFTRP13569 1480 aa31.31■■■□□ 2.6
SBDS-202ENST00000414306 ERCC6Q03468 1493 aa31.26■■■□□ 2.6
SBDS-202ENST00000414306 KIF21AQ7Z4S6 1674 aa31.25■■■□□ 2.59
SBDS-202ENST00000414306 PRDM2Q13029 1718 aa31.24■■■□□ 2.59
SBDS-202ENST00000414306 PDS5BQ9NTI5 1447 aa31.19■■■□□ 2.58
SBDS-202ENST00000414306 FANCD2Q9BXW9 1451 aa31.12■■■□□ 2.57
SBDS-202ENST00000414306 CEP164Q9UPV0 1460 aa31.05■■■□□ 2.56
SBDS-202ENST00000414306 THOC2Q8NI27 1593 aaKnown RBP30.97■■■□□ 2.55
SBDS-202ENST00000414306 MRC2Q9UBG0 1479 aa30.9■■■□□ 2.54
SBDS-202ENST00000414306 URB2Q14146 1524 aaKnown RBP30.8■■■□□ 2.52
SBDS-202ENST00000414306 WDR62O43379 1518 aa30.78■■■□□ 2.52
SBDS-202ENST00000414306 ABCC8Q09428 1581 aa30.68■■■□□ 2.5
SBDS-202ENST00000414306 CUX2O14529 1486 aa30.68■■■□□ 2.5
SBDS-202ENST00000414306 TOPBP1Q92547 1522 aa30.67■■■□□ 2.5
SBDS-202ENST00000414306 DNMBPQ6XZF7 1577 aa30.67■■■□□ 2.5
SBDS-202ENST00000414306 CUX1P39880 1505 aa30.62■■■□□ 2.49
SBDS-202ENST00000414306 WRNQ14191 1432 aaPredicted RBP eCLIP30.53■■■□□ 2.48
SBDS-202ENST00000414306 SYNJ1O43426 1573 aa30.51■■■□□ 2.47
SBDS-202ENST00000414306 FGD5Q6ZNL6 1462 aa30.45■■■□□ 2.46
SBDS-202ENST00000414306 BIVM-ERCC5R4GMW8 1640 aa30.44■■■□□ 2.46
SBDS-202ENST00000414306 POLA1P09884 1462 aaPredicted RBP30.44■■■□□ 2.46
SBDS-202ENST00000414306 TOP2BQ02880 1626 aa30.43■■■□□ 2.46
SBDS-202ENST00000414306 RAD54L2Q9Y4B4 1467 aa30.35■■■□□ 2.45
SBDS-202ENST00000414306 IFT140Q96RY7 1462 aa30.32■■■□□ 2.44
SBDS-202ENST00000414306 TARBP1Q13395 1621 aaKnown RBP30.31■■■□□ 2.44
SBDS-202ENST00000414306 SOGA1O94964 1423 aa30.3■■■□□ 2.44
SBDS-202ENST00000414306 ZNF608Q9ULD9 1512 aaPredicted RBP30.25■■■□□ 2.43
SBDS-202ENST00000414306 WDR97A6NE52 1622 aa30.2■■■□□ 2.42
SBDS-202ENST00000414306 EIF4G3O43432 1585 aaKnown RBP30.17■■■□□ 2.42
SBDS-202ENST00000414306 TDRD9Q8NDG6 1382 aaKnown RBP30.13■■■□□ 2.41
SBDS-202ENST00000414306 TRIM41Q8WV44 630 aa30.12■■■□□ 2.41
SBDS-202ENST00000414306 AQRO60306 1485 aaKnown RBP eCLIP30.11■■■□□ 2.417e-7■■□□□ 14.1
SBDS-202ENST00000414306 ABCA10Q8WWZ4 1543 aa30.11■■■□□ 2.41
SBDS-202ENST00000414306 ABCA5Q8WWZ7 1642 aa30.01■■■□□ 2.39
SBDS-202ENST00000414306 CHIC1Q5VXU3 224 aa30■■■□□ 2.39
SBDS-202ENST00000414306 PBRM1Q86U86 1689 aa29.98■■■□□ 2.39
SBDS-202ENST00000414306 GAPVD1Q14C86 1478 aa29.96■■■□□ 2.39
SBDS-202ENST00000414306 GRIN2BQ13224 1484 aa29.88■■■□□ 2.37
SBDS-202ENST00000414306 SNAPC4Q5SXM2 1469 aa29.85■■■□□ 2.37
SBDS-202ENST00000414306 KIF27Q86VH2 1401 aa29.84■■■□□ 2.37
SBDS-202ENST00000414306 RUSC2Q8N2Y8 1516 aa29.8■■■□□ 2.36
SBDS-202ENST00000414306 CHD1O14646 1710 aa29.76■■■□□ 2.35
SBDS-202ENST00000414306 ERICH3Q5RHP9 1530 aa29.75■■■□□ 2.35
SBDS-202ENST00000414306 MAGI1Q96QZ7 1491 aaPredicted RBP29.75■■■□□ 2.35
SBDS-202ENST00000414306 FBLN2P98095 1184 aa29.72■■■□□ 2.35
SBDS-202ENST00000414306 ADAMTS12P58397 1594 aa29.71■■■□□ 2.35
SBDS-202ENST00000414306 IGF1RP08069 1367 aa29.65■■■□□ 2.34
SBDS-202ENST00000414306 SYNJ2O15056 1496 aa29.65■■■□□ 2.34
SBDS-202ENST00000414306 CHMP7Q8WUX9 453 aaPredicted RBP29.62■■■□□ 2.33
SBDS-202ENST00000414306 CUL7Q14999 1698 aa29.61■■■□□ 2.33
SBDS-202ENST00000414306 FAM9AQ8IZU1 332 aaPredicted RBP29.61■■■□□ 2.33
SBDS-202ENST00000414306 FHAD1B1AJZ9 1412 aa29.6■■■□□ 2.33
SBDS-202ENST00000414306 GRIN2AQ12879 1464 aa29.52■■■□□ 2.32
SBDS-202ENST00000414306 CARMIL1Q5VZK9 1371 aa29.51■■■□□ 2.31
SBDS-202ENST00000414306 OSCARQ8IYS5 282 aa29.5■■■□□ 2.31
SBDS-202ENST00000414306 EEA1Q15075 1411 aa29.48■■■□□ 2.31
SBDS-202ENST00000414306 CSRNP3Q8WYN3 585 aa29.44■■■□□ 2.3
SBDS-202ENST00000414306 CEP170Q5SW79 1584 aa29.41■■■□□ 2.3
SBDS-202ENST00000414306 RAPGEF2Q9Y4G8 1499 aa29.39■■■□□ 2.29
SBDS-202ENST00000414306 PRXQ9BXM0 1461 aa29.36■■■□□ 2.29
SBDS-202ENST00000414306 NUP160Q12769 1436 aa29.33■■■□□ 2.29
SBDS-202ENST00000414306 CLASP1Q7Z460 1538 aa29.33■■■□□ 2.29
SBDS-202ENST00000414306 EHMT2Q96KQ7 1210 aa29.3■■■□□ 2.28
SBDS-202ENST00000414306 DNAJC5Q9H3Z4 198 aa29.27■■■□□ 2.28
SBDS-202ENST00000414306 KIF21BO75037 1637 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms