RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 NISCHQ9Y2I1 1504 aa37.18■■■■□ 3.54
TRAPPC12-203ENST00000411973 CCDC180Q9P1Z9 1646 aa32.98■■■□□ 2.87
TRAPPC12-203ENST00000411973 ABCC9O60706 1549 aa31.96■■■□□ 2.71
TRAPPC12-203ENST00000411973 ZCCHC6Q5VYS8 1495 aaKnown RBP31.02■■■□□ 2.56
TRAPPC12-203ENST00000411973 NACADO15069 1562 aa30.94■■■□□ 2.54
TRAPPC12-203ENST00000411973 RB1CC1Q8TDY2 1594 aa30.9■■■□□ 2.54
TRAPPC12-203ENST00000411973 DCAF8L2P0C7V8 631 aa30.87■■■□□ 2.53
TRAPPC12-203ENST00000411973 MYO15BQ96JP2 1530 aa30.87■■■□□ 2.53
TRAPPC12-203ENST00000411973 DCAF1Q9Y4B6 1507 aa30.82■■■□□ 2.52
TRAPPC12-203ENST00000411973 UNC13AQ9UPW8 1703 aa30.22■■■□□ 2.43
TRAPPC12-203ENST00000411973 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
TRAPPC12-203ENST00000411973 BICRAQ9NZM4 1560 aa29.97■■■□□ 2.39
TRAPPC12-203ENST00000411973 PABPN1Q86U42 306 aaKnown RBP eCLIP29.9■■■□□ 2.38
TRAPPC12-203ENST00000411973 SHROOM4Q9ULL8 1493 aa29.71■■■□□ 2.35
TRAPPC12-203ENST00000411973 DNAJC5BQ9UF47 199 aa29.15■■■□□ 2.26
TRAPPC12-203ENST00000411973 EIF4G1Q04637 1599 aaKnown RBP29.14■■■□□ 2.26
TRAPPC12-203ENST00000411973 CC2D2AQ9P2K1 1620 aa28.96■■■□□ 2.23
TRAPPC12-203ENST00000411973 CECR2Q9BXF3 1484 aa28.91■■■□□ 2.22
TRAPPC12-203ENST00000411973 SMARCA4P51532 1647 aa28.8■■■□□ 2.2
TRAPPC12-203ENST00000411973 BAZ1AQ9NRL2 1556 aaPredicted RBP28.79■■■□□ 2.2
TRAPPC12-203ENST00000411973 MROH2BQ7Z745 1585 aa28.63■■■□□ 2.17
TRAPPC12-203ENST00000411973 ATAD2BQ9ULI0 1458 aa28.58■■■□□ 2.17
TRAPPC12-203ENST00000411973 SMARCA2P51531 1590 aa28.57■■■□□ 2.16
TRAPPC12-203ENST00000411973 PEG3Q9GZU2 1588 aa28.55■■■□□ 2.16
TRAPPC12-203ENST00000411973 NCAPD3P42695 1498 aa28.55■■■□□ 2.16
TRAPPC12-203ENST00000411973 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
TRAPPC12-203ENST00000411973 RSF1Q96T23 1441 aaPredicted RBP28.41■■■□□ 2.14
TRAPPC12-203ENST00000411973 WIZO95785 1651 aa28.34■■■□□ 2.13
TRAPPC12-203ENST00000411973 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
TRAPPC12-203ENST00000411973 TOP2AP11388 1531 aaKnown RBP28.07■■■□□ 2.08
TRAPPC12-203ENST00000411973 SUPT5HO00267 1087 aaKnown RBP27.78■■■□□ 2.04
TRAPPC12-203ENST00000411973 LAMC3Q9Y6N6 1575 aa27.75■■■□□ 2.03
TRAPPC12-203ENST00000411973 NESP48681 1621 aa27.74■■■□□ 2.03
TRAPPC12-203ENST00000411973 CCDC88BA6NC98 1476 aa27.72■■■□□ 2.03
TRAPPC12-203ENST00000411973 CADPSQ9ULU8 1353 aa27.71■■■□□ 2.03
TRAPPC12-203ENST00000411973 CFTRP13569 1480 aa27.61■■■□□ 2.01
TRAPPC12-203ENST00000411973 ERCC6Q03468 1493 aa27.54■■■□□ 2
TRAPPC12-203ENST00000411973 PDS5BQ9NTI5 1447 aa27.54■■■□□ 2
TRAPPC12-203ENST00000411973 KIF21AQ7Z4S6 1674 aa27.45■■□□□ 1.98
TRAPPC12-203ENST00000411973 PRDM2Q13029 1718 aa27.44■■□□□ 1.98
TRAPPC12-203ENST00000411973 FANCD2Q9BXW9 1451 aa27.38■■□□□ 1.97
TRAPPC12-203ENST00000411973 CEP164Q9UPV0 1460 aa27.32■■□□□ 1.96
TRAPPC12-203ENST00000411973 THOC2Q8NI27 1593 aaKnown RBP27.31■■□□□ 1.96
TRAPPC12-203ENST00000411973 MRC2Q9UBG0 1479 aa27.24■■□□□ 1.95
TRAPPC12-203ENST00000411973 CUX2O14529 1486 aa27.21■■□□□ 1.95
TRAPPC12-203ENST00000411973 WDR62O43379 1518 aa27.16■■□□□ 1.94
TRAPPC12-203ENST00000411973 URB2Q14146 1524 aaKnown RBP27.09■■□□□ 1.93
TRAPPC12-203ENST00000411973 ABCC8Q09428 1581 aa27.02■■□□□ 1.92
TRAPPC12-203ENST00000411973 TOPBP1Q92547 1522 aa26.97■■□□□ 1.91
TRAPPC12-203ENST00000411973 DNMBPQ6XZF7 1577 aa26.97■■□□□ 1.91
TRAPPC12-203ENST00000411973 CUX1P39880 1505 aa26.85■■□□□ 1.89
TRAPPC12-203ENST00000411973 POLA1P09884 1462 aaPredicted RBP26.76■■□□□ 1.87
TRAPPC12-203ENST00000411973 WRNQ14191 1432 aaPredicted RBP eCLIP26.76■■□□□ 1.87
TRAPPC12-203ENST00000411973 IFT140Q96RY7 1462 aa26.75■■□□□ 1.87
TRAPPC12-203ENST00000411973 FGD5Q6ZNL6 1462 aa26.72■■□□□ 1.87
TRAPPC12-203ENST00000411973 TOP2BQ02880 1626 aa26.7■■□□□ 1.86
TRAPPC12-203ENST00000411973 BIVM-ERCC5R4GMW8 1640 aa26.7■■□□□ 1.86
TRAPPC12-203ENST00000411973 SYNJ1O43426 1573 aa26.68■■□□□ 1.86
TRAPPC12-203ENST00000411973 TARBP1Q13395 1621 aaKnown RBP26.68■■□□□ 1.86
TRAPPC12-203ENST00000411973 SOGA1O94964 1423 aa26.65■■□□□ 1.86
TRAPPC12-203ENST00000411973 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
TRAPPC12-203ENST00000411973 ZNF608Q9ULD9 1512 aaPredicted RBP26.59■■□□□ 1.85
TRAPPC12-203ENST00000411973 WDR97A6NE52 1622 aa26.52■■□□□ 1.84
TRAPPC12-203ENST00000411973 EIF4G3O43432 1585 aaKnown RBP26.5■■□□□ 1.83
TRAPPC12-203ENST00000411973 ABCA10Q8WWZ4 1543 aa26.49■■□□□ 1.83
TRAPPC12-203ENST00000411973 AQRO60306 1485 aaKnown RBP eCLIP26.46■■□□□ 1.83
TRAPPC12-203ENST00000411973 TDRD9Q8NDG6 1382 aaKnown RBP26.46■■□□□ 1.83
TRAPPC12-203ENST00000411973 ABCA5Q8WWZ7 1642 aa26.37■■□□□ 1.81
TRAPPC12-203ENST00000411973 GAPVD1Q14C86 1478 aa26.35■■□□□ 1.81
TRAPPC12-203ENST00000411973 GRIN2BQ13224 1484 aa26.31■■□□□ 1.8
TRAPPC12-203ENST00000411973 PBRM1Q86U86 1689 aa26.28■■□□□ 1.8
TRAPPC12-203ENST00000411973 TRIM41Q8WV44 630 aa26.27■■□□□ 1.8
TRAPPC12-203ENST00000411973 MAGI1Q96QZ7 1491 aaPredicted RBP26.23■■□□□ 1.79
TRAPPC12-203ENST00000411973 SNAPC4Q5SXM2 1469 aa26.23■■□□□ 1.79
TRAPPC12-203ENST00000411973 KIF27Q86VH2 1401 aa26.2■■□□□ 1.78
TRAPPC12-203ENST00000411973 ERICH3Q5RHP9 1530 aa26.19■■□□□ 1.78
TRAPPC12-203ENST00000411973 CHD1O14646 1710 aa26.14■■□□□ 1.77
TRAPPC12-203ENST00000411973 SYNJ2O15056 1496 aa26.12■■□□□ 1.77
TRAPPC12-203ENST00000411973 CHIC1Q5VXU3 224 aa26.11■■□□□ 1.77
TRAPPC12-203ENST00000411973 OSCARQ8IYS5 282 aa26.11■■□□□ 1.77
TRAPPC12-203ENST00000411973 DNAJC5Q9H3Z4 198 aa26.11■■□□□ 1.77
TRAPPC12-203ENST00000411973 ADAMTS12P58397 1594 aa26.08■■□□□ 1.77
TRAPPC12-203ENST00000411973 IGF1RP08069 1367 aa26.07■■□□□ 1.76
TRAPPC12-203ENST00000411973 FBLN2P98095 1184 aa26.06■■□□□ 1.76
TRAPPC12-203ENST00000411973 CHMP7Q8WUX9 453 aaPredicted RBP26.06■■□□□ 1.76
TRAPPC12-203ENST00000411973 FHAD1B1AJZ9 1412 aa26.05■■□□□ 1.76
TRAPPC12-203ENST00000411973 RUSC2Q8N2Y8 1516 aa26■■□□□ 1.75
TRAPPC12-203ENST00000411973 CUL7Q14999 1698 aa25.99■■□□□ 1.75
TRAPPC12-203ENST00000411973 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
TRAPPC12-203ENST00000411973 CARMIL1Q5VZK9 1371 aa25.9■■□□□ 1.74
TRAPPC12-203ENST00000411973 CLASP1Q7Z460 1538 aa25.87■■□□□ 1.73
TRAPPC12-203ENST00000411973 NUP160Q12769 1436 aa25.87■■□□□ 1.73
TRAPPC12-203ENST00000411973 EEA1Q15075 1411 aa25.85■■□□□ 1.73
TRAPPC12-203ENST00000411973 CEP170Q5SW79 1584 aa25.83■■□□□ 1.73
TRAPPC12-203ENST00000411973 RAPGEF2Q9Y4G8 1499 aa25.78■■□□□ 1.72
TRAPPC12-203ENST00000411973 CSRNP3Q8WYN3 585 aa25.77■■□□□ 1.72
TRAPPC12-203ENST00000411973 PRXQ9BXM0 1461 aa25.76■■□□□ 1.71
TRAPPC12-203ENST00000411973 ARHGEF11O15085 1522 aa25.68■■□□□ 1.7
TRAPPC12-203ENST00000411973 KIAA0586Q9BVV6 1533 aa25.68■■□□□ 1.7
TRAPPC12-203ENST00000411973 RIMBP3CA6NJZ7 1639 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms