RNA–Protein interactions for RNA: ENST00000411367.1

RN7SKP108-201, Transcript of RNA, 7SK small nuclear pseudogene 108, humanhuman

BASIC

Gene RN7SKP108, Length 328 nt, Biotype misc RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP108-201ENST00000411367 CHIC1Q5VXU3 224 aa16.14■□□□□ 0.17
RN7SKP108-201ENST00000411367 AEBP2Q6ZN18 517 aaPredicted RBP15.81■□□□□ 0.12
RN7SKP108-201ENST00000411367 NISCHQ9Y2I1 1504 aa15.78■□□□□ 0.12
RN7SKP108-201ENST00000411367 PHF23Q9BUL5 403 aaPredicted RBP14.36□□□□□ -0.11
RN7SKP108-201ENST00000411367 CCDC180Q9P1Z9 1646 aa14.14□□□□□ -0.15
RN7SKP108-201ENST00000411367 ABCC9O60706 1549 aa13.8□□□□□ -0.2
RN7SKP108-201ENST00000411367 PLPPR3Q6T4P5 718 aa13.4□□□□□ -0.26
RN7SKP108-201ENST00000411367 RB1CC1Q8TDY2 1594 aa13.24□□□□□ -0.29
RN7SKP108-201ENST00000411367 NACADO15069 1562 aa13.23□□□□□ -0.29
RN7SKP108-201ENST00000411367 UNC13AQ9UPW8 1703 aa13.2□□□□□ -0.3
RN7SKP108-201ENST00000411367 ZCCHC6Q5VYS8 1495 aaKnown RBP13.16□□□□□ -0.3
RN7SKP108-201ENST00000411367 MYO15BQ96JP2 1530 aa13.15□□□□□ -0.3
RN7SKP108-201ENST00000411367 SENP3Q9H4L4 574 aaPredicted RBP13.15□□□□□ -0.3
RN7SKP108-201ENST00000411367 DCAF1Q9Y4B6 1507 aa13.08□□□□□ -0.32
RN7SKP108-201ENST00000411367 BICRAQ9NZM4 1560 aa13□□□□□ -0.33
RN7SKP108-201ENST00000411367 DCAF8L2P0C7V8 631 aa12.95□□□□□ -0.34
RN7SKP108-201ENST00000411367 SCRIBQ14160 1630 aa12.84□□□□□ -0.35
RN7SKP108-201ENST00000411367 PABPN1Q86U42 306 aaKnown RBP eCLIP12.81□□□□□ -0.36
RN7SKP108-201ENST00000411367 DNAJC5BQ9UF47 199 aa12.8□□□□□ -0.36
RN7SKP108-201ENST00000411367 EHMT2Q96KQ7 1210 aa12.71□□□□□ -0.37
RN7SKP108-201ENST00000411367 SHROOM4Q9ULL8 1493 aa12.71□□□□□ -0.38
RN7SKP108-201ENST00000411367 ADRA2BP18089 450 aa12.65□□□□□ -0.38
RN7SKP108-201ENST00000411367 KCNA4P22459 653 aa12.63□□□□□ -0.39
RN7SKP108-201ENST00000411367 EIF4G1Q04637 1599 aaKnown RBP12.56□□□□□ -0.4
RN7SKP108-201ENST00000411367 CC2D2AQ9P2K1 1620 aa12.55□□□□□ -0.4
RN7SKP108-201ENST00000411367 PPP6R1Q9UPN7 881 aa12.41□□□□□ -0.42
RN7SKP108-201ENST00000411367 CECR2Q9BXF3 1484 aa12.39□□□□□ -0.43
RN7SKP108-201ENST00000411367 SMARCA4P51532 1647 aa12.3□□□□□ -0.44
RN7SKP108-201ENST00000411367 CSRNP3Q8WYN3 585 aa12.23□□□□□ -0.45
RN7SKP108-201ENST00000411367 PEG3Q9GZU2 1588 aa12.22□□□□□ -0.45
RN7SKP108-201ENST00000411367 ATAD2BQ9ULI0 1458 aa12.21□□□□□ -0.46
RN7SKP108-201ENST00000411367 FOXD1Q16676 465 aa12.2□□□□□ -0.46
RN7SKP108-201ENST00000411367 MROH2BQ7Z745 1585 aa12.2□□□□□ -0.46
RN7SKP108-201ENST00000411367 BAZ1AQ9NRL2 1556 aaPredicted RBP12.2□□□□□ -0.46
RN7SKP108-201ENST00000411367 NCAPD3P42695 1498 aa12.2□□□□□ -0.46
RN7SKP108-201ENST00000411367 HMGXB3Q12766 1538 aa12.17□□□□□ -0.46
RN7SKP108-201ENST00000411367 SMARCA2P51531 1590 aa12.15□□□□□ -0.46
RN7SKP108-201ENST00000411367 SLC4A1APQ9BWU0 796 aaKnown RBP12.11□□□□□ -0.47
RN7SKP108-201ENST00000411367 WIZO95785 1651 aa12.1□□□□□ -0.47
RN7SKP108-201ENST00000411367 BAZ1BQ9UIG0 1483 aaKnown RBP12.04□□□□□ -0.48
RN7SKP108-201ENST00000411367 NESP48681 1621 aa11.98□□□□□ -0.49
RN7SKP108-201ENST00000411367 RSF1Q96T23 1441 aaPredicted RBP11.97□□□□□ -0.49
RN7SKP108-201ENST00000411367 PPP4R3CPQ6ZMV5 832 aa11.95□□□□□ -0.5
RN7SKP108-201ENST00000411367 KIF21AQ7Z4S6 1674 aa11.92□□□□□ -0.5
RN7SKP108-201ENST00000411367 LAMC3Q9Y6N6 1575 aa11.91□□□□□ -0.5
RN7SKP108-201ENST00000411367 TOP2AP11388 1531 aaKnown RBP11.9□□□□□ -0.5
RN7SKP108-201ENST00000411367 THOC2Q8NI27 1593 aaKnown RBP11.88□□□□□ -0.51
RN7SKP108-201ENST00000411367 PRDM2Q13029 1718 aa11.83□□□□□ -0.52
RN7SKP108-201ENST00000411367 ERCC6Q03468 1493 aa11.8□□□□□ -0.52
RN7SKP108-201ENST00000411367 CUX2O14529 1486 aa11.79□□□□□ -0.52
RN7SKP108-201ENST00000411367 CADPSQ9ULU8 1353 aa11.79□□□□□ -0.52
RN7SKP108-201ENST00000411367 NCBP3Q53F19 620 aaKnown RBP11.78□□□□□ -0.52
RN7SKP108-201ENST00000411367 CFTRP13569 1480 aa11.76□□□□□ -0.53
RN7SKP108-201ENST00000411367 CCDC88BA6NC98 1476 aa11.74□□□□□ -0.53
RN7SKP108-201ENST00000411367 NPM3O75607 178 aaKnown RBP11.73□□□□□ -0.53
RN7SKP108-201ENST00000411367 PDS5BQ9NTI5 1447 aa11.71□□□□□ -0.53
RN7SKP108-201ENST00000411367 WDR62O43379 1518 aa11.7□□□□□ -0.54
RN7SKP108-201ENST00000411367 ZBTB22O15209 634 aa11.69□□□□□ -0.54
RN7SKP108-201ENST00000411367 FANCD2Q9BXW9 1451 aa11.68□□□□□ -0.54
RN7SKP108-201ENST00000411367 MRC2Q9UBG0 1479 aa11.67□□□□□ -0.54
RN7SKP108-201ENST00000411367 CEP164Q9UPV0 1460 aa11.65□□□□□ -0.54
RN7SKP108-201ENST00000411367 PIAS4Q8N2W9 510 aaPredicted RBP11.65□□□□□ -0.54
RN7SKP108-201ENST00000411367 URB2Q14146 1524 aaKnown RBP11.65□□□□□ -0.55
RN7SKP108-201ENST00000411367 SLC24A1O60721 1099 aa11.57□□□□□ -0.56
RN7SKP108-201ENST00000411367 TOPBP1Q92547 1522 aa11.52□□□□□ -0.57
RN7SKP108-201ENST00000411367 DNMBPQ6XZF7 1577 aa11.5□□□□□ -0.57
RN7SKP108-201ENST00000411367 DNAJC5Q9H3Z4 198 aa11.49□□□□□ -0.57
RN7SKP108-201ENST00000411367 TARBP1Q13395 1621 aaKnown RBP11.49□□□□□ -0.57
RN7SKP108-201ENST00000411367 CUX1P39880 1505 aa11.45□□□□□ -0.58
RN7SKP108-201ENST00000411367 ZNF608Q9ULD9 1512 aaPredicted RBP11.45□□□□□ -0.58
RN7SKP108-201ENST00000411367 RTN4Q9NQC3 1192 aaKnown RBP11.44□□□□□ -0.58
RN7SKP108-201ENST00000411367 WDR97A6NE52 1622 aa11.43□□□□□ -0.58
RN7SKP108-201ENST00000411367 SUPT5HO00267 1087 aaKnown RBP11.43□□□□□ -0.58
RN7SKP108-201ENST00000411367 EIF4G3O43432 1585 aaKnown RBP11.42□□□□□ -0.58
RN7SKP108-201ENST00000411367 ABCC8Q09428 1581 aa11.42□□□□□ -0.58
RN7SKP108-201ENST00000411367 POLA1P09884 1462 aaPredicted RBP11.42□□□□□ -0.58
RN7SKP108-201ENST00000411367 IFT140Q96RY7 1462 aa11.41□□□□□ -0.58
RN7SKP108-201ENST00000411367 CNKSR2Q8WXI2 1034 aa11.41□□□□□ -0.58
RN7SKP108-201ENST00000411367 BIVM-ERCC5R4GMW8 1640 aa11.37□□□□□ -0.59
RN7SKP108-201ENST00000411367 FGD5Q6ZNL6 1462 aa11.37□□□□□ -0.59
RN7SKP108-201ENST00000411367 RAD54L2Q9Y4B4 1467 aa11.36□□□□□ -0.59
RN7SKP108-201ENST00000411367 CHD1O14646 1710 aa11.35□□□□□ -0.59
RN7SKP108-201ENST00000411367 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
RN7SKP108-201ENST00000411367 SYNJ1O43426 1573 aa11.33□□□□□ -0.6
RN7SKP108-201ENST00000411367 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
RN7SKP108-201ENST00000411367 AQRO60306 1485 aaKnown RBP eCLIP11.32□□□□□ -0.6
RN7SKP108-201ENST00000411367 TOP2BQ02880 1626 aa11.31□□□□□ -0.6
RN7SKP108-201ENST00000411367 PBRM1Q86U86 1689 aa11.31□□□□□ -0.6
RN7SKP108-201ENST00000411367 ABCA5Q8WWZ7 1642 aa11.3□□□□□ -0.6
RN7SKP108-201ENST00000411367 SOGA1O94964 1423 aa11.28□□□□□ -0.6
RN7SKP108-201ENST00000411367 ABCA10Q8WWZ4 1543 aa11.26□□□□□ -0.61
RN7SKP108-201ENST00000411367 TDRD9Q8NDG6 1382 aaKnown RBP11.24□□□□□ -0.61
RN7SKP108-201ENST00000411367 WRNQ14191 1432 aaPredicted RBP eCLIP11.23□□□□□ -0.61
RN7SKP108-201ENST00000411367 SNAPC4Q5SXM2 1469 aa11.22□□□□□ -0.61
RN7SKP108-201ENST00000411367 RIMBP3CA6NJZ7 1639 aa11.2□□□□□ -0.62
RN7SKP108-201ENST00000411367 RIMBP3BA6NNM3 1639 aa11.2□□□□□ -0.62
RN7SKP108-201ENST00000411367 RIMBP3Q9UFD9 1639 aa11.2□□□□□ -0.62
RN7SKP108-201ENST00000411367 SCAF1Q9H7N4 1312 aaKnown RBP11.2□□□□□ -0.62
RN7SKP108-201ENST00000411367 CLASP1Q7Z460 1538 aa11.19□□□□□ -0.62
RN7SKP108-201ENST00000411367 GRIN2BQ13224 1484 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms