RNA–Protein interactions for RNA: ENST00000411367.1

RN7SKP108-201, Transcript of RNA, 7SK small nuclear pseudogene 108, humanhuman

BASIC

Gene RN7SKP108, Length 328 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP108-201ENST00000411367 CHIC1Q5VXU3 224 aa16.14■□□□□ 0.17
RN7SKP108-201ENST00000411367 AEBP2Q6ZN18 517 aaPredicted RBP15.81■□□□□ 0.12
RN7SKP108-201ENST00000411367 NISCHQ9Y2I1 1504 aa15.78■□□□□ 0.12
RN7SKP108-201ENST00000411367 PHF23Q9BUL5 403 aaPredicted RBP14.36□□□□□ -0.11
RN7SKP108-201ENST00000411367 CCDC180Q9P1Z9 1646 aa14.14□□□□□ -0.15
RN7SKP108-201ENST00000411367 ABCC9O60706 1549 aa13.8□□□□□ -0.2
RN7SKP108-201ENST00000411367 PLPPR3Q6T4P5 718 aa13.4□□□□□ -0.26
RN7SKP108-201ENST00000411367 RB1CC1Q8TDY2 1594 aa13.24□□□□□ -0.29
RN7SKP108-201ENST00000411367 NACADO15069 1562 aa13.23□□□□□ -0.29
RN7SKP108-201ENST00000411367 UNC13AQ9UPW8 1703 aa13.2□□□□□ -0.3
RN7SKP108-201ENST00000411367 ZCCHC6Q5VYS8 1495 aaKnown RBP13.16□□□□□ -0.3
RN7SKP108-201ENST00000411367 MYO15BQ96JP2 1530 aa13.15□□□□□ -0.3
RN7SKP108-201ENST00000411367 SENP3Q9H4L4 574 aaPredicted RBP13.15□□□□□ -0.3
RN7SKP108-201ENST00000411367 DCAF1Q9Y4B6 1507 aa13.08□□□□□ -0.32
RN7SKP108-201ENST00000411367 BICRAQ9NZM4 1560 aa13□□□□□ -0.33
RN7SKP108-201ENST00000411367 DCAF8L2P0C7V8 631 aa12.95□□□□□ -0.34
RN7SKP108-201ENST00000411367 SCRIBQ14160 1630 aa12.84□□□□□ -0.35
RN7SKP108-201ENST00000411367 PABPN1Q86U42 306 aaKnown RBP eCLIP12.81□□□□□ -0.36
RN7SKP108-201ENST00000411367 DNAJC5BQ9UF47 199 aa12.8□□□□□ -0.36
RN7SKP108-201ENST00000411367 EHMT2Q96KQ7 1210 aa12.71□□□□□ -0.37
RN7SKP108-201ENST00000411367 SHROOM4Q9ULL8 1493 aa12.71□□□□□ -0.38
RN7SKP108-201ENST00000411367 ADRA2BP18089 450 aa12.65□□□□□ -0.38
RN7SKP108-201ENST00000411367 KCNA4P22459 653 aa12.63□□□□□ -0.39
RN7SKP108-201ENST00000411367 EIF4G1Q04637 1599 aaKnown RBP12.56□□□□□ -0.4
RN7SKP108-201ENST00000411367 CC2D2AQ9P2K1 1620 aa12.55□□□□□ -0.4
RN7SKP108-201ENST00000411367 PPP6R1Q9UPN7 881 aa12.41□□□□□ -0.42
RN7SKP108-201ENST00000411367 CECR2Q9BXF3 1484 aa12.39□□□□□ -0.43
RN7SKP108-201ENST00000411367 SMARCA4P51532 1647 aa12.3□□□□□ -0.44
RN7SKP108-201ENST00000411367 CSRNP3Q8WYN3 585 aa12.23□□□□□ -0.45
RN7SKP108-201ENST00000411367 PEG3Q9GZU2 1588 aa12.22□□□□□ -0.45
RN7SKP108-201ENST00000411367 ATAD2BQ9ULI0 1458 aa12.21□□□□□ -0.46
RN7SKP108-201ENST00000411367 FOXD1Q16676 465 aa12.2□□□□□ -0.46
RN7SKP108-201ENST00000411367 MROH2BQ7Z745 1585 aa12.2□□□□□ -0.46
RN7SKP108-201ENST00000411367 BAZ1AQ9NRL2 1556 aaPredicted RBP12.2□□□□□ -0.46
RN7SKP108-201ENST00000411367 NCAPD3P42695 1498 aa12.2□□□□□ -0.46
RN7SKP108-201ENST00000411367 HMGXB3Q12766 1538 aa12.17□□□□□ -0.46
RN7SKP108-201ENST00000411367 SMARCA2P51531 1590 aa12.15□□□□□ -0.46
RN7SKP108-201ENST00000411367 SLC4A1APQ9BWU0 796 aaKnown RBP12.11□□□□□ -0.47
RN7SKP108-201ENST00000411367 WIZO95785 1651 aa12.1□□□□□ -0.47
RN7SKP108-201ENST00000411367 BAZ1BQ9UIG0 1483 aaKnown RBP12.04□□□□□ -0.48
RN7SKP108-201ENST00000411367 NESP48681 1621 aa11.98□□□□□ -0.49
RN7SKP108-201ENST00000411367 RSF1Q96T23 1441 aaPredicted RBP11.97□□□□□ -0.49
RN7SKP108-201ENST00000411367 PPP4R3CPQ6ZMV5 832 aa11.95□□□□□ -0.5
RN7SKP108-201ENST00000411367 KIF21AQ7Z4S6 1674 aa11.92□□□□□ -0.5
RN7SKP108-201ENST00000411367 LAMC3Q9Y6N6 1575 aa11.91□□□□□ -0.5
RN7SKP108-201ENST00000411367 TOP2AP11388 1531 aaKnown RBP11.9□□□□□ -0.5
RN7SKP108-201ENST00000411367 THOC2Q8NI27 1593 aaKnown RBP11.88□□□□□ -0.51
RN7SKP108-201ENST00000411367 PRDM2Q13029 1718 aa11.83□□□□□ -0.52
RN7SKP108-201ENST00000411367 ERCC6Q03468 1493 aa11.8□□□□□ -0.52
RN7SKP108-201ENST00000411367 CUX2O14529 1486 aa11.79□□□□□ -0.52
RN7SKP108-201ENST00000411367 CADPSQ9ULU8 1353 aa11.79□□□□□ -0.52
RN7SKP108-201ENST00000411367 NCBP3Q53F19 620 aaKnown RBP11.78□□□□□ -0.52
RN7SKP108-201ENST00000411367 CFTRP13569 1480 aa11.76□□□□□ -0.53
RN7SKP108-201ENST00000411367 CCDC88BA6NC98 1476 aa11.74□□□□□ -0.53
RN7SKP108-201ENST00000411367 NPM3O75607 178 aaKnown RBP11.73□□□□□ -0.53
RN7SKP108-201ENST00000411367 PDS5BQ9NTI5 1447 aa11.71□□□□□ -0.53
RN7SKP108-201ENST00000411367 WDR62O43379 1518 aa11.7□□□□□ -0.54
RN7SKP108-201ENST00000411367 ZBTB22O15209 634 aa11.69□□□□□ -0.54
RN7SKP108-201ENST00000411367 FANCD2Q9BXW9 1451 aa11.68□□□□□ -0.54
RN7SKP108-201ENST00000411367 MRC2Q9UBG0 1479 aa11.67□□□□□ -0.54
RN7SKP108-201ENST00000411367 CEP164Q9UPV0 1460 aa11.65□□□□□ -0.54
RN7SKP108-201ENST00000411367 PIAS4Q8N2W9 510 aaPredicted RBP11.65□□□□□ -0.54
RN7SKP108-201ENST00000411367 URB2Q14146 1524 aaKnown RBP11.65□□□□□ -0.55
RN7SKP108-201ENST00000411367 SLC24A1O60721 1099 aa11.57□□□□□ -0.56
RN7SKP108-201ENST00000411367 TOPBP1Q92547 1522 aa11.52□□□□□ -0.57
RN7SKP108-201ENST00000411367 DNMBPQ6XZF7 1577 aa11.5□□□□□ -0.57
RN7SKP108-201ENST00000411367 DNAJC5Q9H3Z4 198 aa11.49□□□□□ -0.57
RN7SKP108-201ENST00000411367 TARBP1Q13395 1621 aaKnown RBP11.49□□□□□ -0.57
RN7SKP108-201ENST00000411367 CUX1P39880 1505 aa11.45□□□□□ -0.58
RN7SKP108-201ENST00000411367 ZNF608Q9ULD9 1512 aaPredicted RBP11.45□□□□□ -0.58
RN7SKP108-201ENST00000411367 RTN4Q9NQC3 1192 aaKnown RBP11.44□□□□□ -0.58
RN7SKP108-201ENST00000411367 WDR97A6NE52 1622 aa11.43□□□□□ -0.58
RN7SKP108-201ENST00000411367 SUPT5HO00267 1087 aaKnown RBP11.43□□□□□ -0.58
RN7SKP108-201ENST00000411367 EIF4G3O43432 1585 aaKnown RBP11.42□□□□□ -0.58
RN7SKP108-201ENST00000411367 ABCC8Q09428 1581 aa11.42□□□□□ -0.58
RN7SKP108-201ENST00000411367 POLA1P09884 1462 aaPredicted RBP11.42□□□□□ -0.58
RN7SKP108-201ENST00000411367 IFT140Q96RY7 1462 aa11.41□□□□□ -0.58
RN7SKP108-201ENST00000411367 CNKSR2Q8WXI2 1034 aa11.41□□□□□ -0.58
RN7SKP108-201ENST00000411367 BIVM-ERCC5R4GMW8 1640 aa11.37□□□□□ -0.59
RN7SKP108-201ENST00000411367 FGD5Q6ZNL6 1462 aa11.37□□□□□ -0.59
RN7SKP108-201ENST00000411367 RAD54L2Q9Y4B4 1467 aa11.36□□□□□ -0.59
RN7SKP108-201ENST00000411367 CHD1O14646 1710 aa11.35□□□□□ -0.59
RN7SKP108-201ENST00000411367 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
RN7SKP108-201ENST00000411367 SYNJ1O43426 1573 aa11.33□□□□□ -0.6
RN7SKP108-201ENST00000411367 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
RN7SKP108-201ENST00000411367 AQRO60306 1485 aaKnown RBP eCLIP11.32□□□□□ -0.6
RN7SKP108-201ENST00000411367 TOP2BQ02880 1626 aa11.31□□□□□ -0.6
RN7SKP108-201ENST00000411367 PBRM1Q86U86 1689 aa11.31□□□□□ -0.6
RN7SKP108-201ENST00000411367 ABCA5Q8WWZ7 1642 aa11.3□□□□□ -0.6
RN7SKP108-201ENST00000411367 SOGA1O94964 1423 aa11.28□□□□□ -0.6
RN7SKP108-201ENST00000411367 ABCA10Q8WWZ4 1543 aa11.26□□□□□ -0.61
RN7SKP108-201ENST00000411367 TDRD9Q8NDG6 1382 aaKnown RBP11.24□□□□□ -0.61
RN7SKP108-201ENST00000411367 WRNQ14191 1432 aaPredicted RBP eCLIP11.23□□□□□ -0.61
RN7SKP108-201ENST00000411367 SNAPC4Q5SXM2 1469 aa11.22□□□□□ -0.61
RN7SKP108-201ENST00000411367 RIMBP3CA6NJZ7 1639 aa11.2□□□□□ -0.62
RN7SKP108-201ENST00000411367 RIMBP3BA6NNM3 1639 aa11.2□□□□□ -0.62
RN7SKP108-201ENST00000411367 RIMBP3Q9UFD9 1639 aa11.2□□□□□ -0.62
RN7SKP108-201ENST00000411367 SCAF1Q9H7N4 1312 aaKnown RBP11.2□□□□□ -0.62
RN7SKP108-201ENST00000411367 CLASP1Q7Z460 1538 aa11.19□□□□□ -0.62
RN7SKP108-201ENST00000411367 GRIN2BQ13224 1484 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 211.4 ms