RNA–Protein interactions for RNA: ENST00000409728.5

XIRP2-206, Transcript of xin actin binding repeat containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene XIRP2, Length 3,391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2-206ENST00000409728 NISCHQ9Y2I1 1504 aa18.44■□□□□ 0.54
XIRP2-206ENST00000409728 CCDC180Q9P1Z9 1646 aa15.96■□□□□ 0.14
XIRP2-206ENST00000409728 ZCCHC6Q5VYS8 1495 aaKnown RBP15.48■□□□□ 0.07
XIRP2-206ENST00000409728 DCAF8L2P0C7V8 631 aa15.47■□□□□ 0.07
XIRP2-206ENST00000409728 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.04
XIRP2-206ENST00000409728 ABCC9O60706 1549 aa15.2■□□□□ 0.02
XIRP2-206ENST00000409728 DCAF1Q9Y4B6 1507 aa15.14■□□□□ 0.02
XIRP2-206ENST00000409728 MYO15BQ96JP2 1530 aa14.91□□□□□ -0.02
XIRP2-206ENST00000409728 NACADO15069 1562 aa14.88□□□□□ -0.03
XIRP2-206ENST00000409728 SCRIBQ14160 1630 aa14.84□□□□□ -0.03
XIRP2-206ENST00000409728 SUPT5HO00267 1087 aaKnown RBP14.81□□□□□ -0.04
XIRP2-206ENST00000409728 RB1CC1Q8TDY2 1594 aa14.76□□□□□ -0.05
XIRP2-206ENST00000409728 UNC13AQ9UPW8 1703 aa14.45□□□□□ -0.1
XIRP2-206ENST00000409728 PABPN1Q86U42 306 aaKnown RBP eCLIP14.41□□□□□ -0.1
XIRP2-206ENST00000409728 CECR2Q9BXF3 1484 aa14.38□□□□□ -0.11
XIRP2-206ENST00000409728 RSF1Q96T23 1441 aaPredicted RBP14.37□□□□□ -0.11
XIRP2-206ENST00000409728 BICRAQ9NZM4 1560 aa14.3□□□□□ -0.12
XIRP2-206ENST00000409728 MROH2BQ7Z745 1585 aa14.29□□□□□ -0.12
XIRP2-206ENST00000409728 BAZ1AQ9NRL2 1556 aaPredicted RBP14.22□□□□□ -0.13
XIRP2-206ENST00000409728 WIZO95785 1651 aa14.19□□□□□ -0.14
XIRP2-206ENST00000409728 SMARCA4P51532 1647 aa14.15□□□□□ -0.14
XIRP2-206ENST00000409728 CHIC1Q5VXU3 224 aa14.12□□□□□ -0.15
XIRP2-206ENST00000409728 TOP2AP11388 1531 aaKnown RBP13.99□□□□□ -0.17
XIRP2-206ENST00000409728 ATAD2BQ9ULI0 1458 aa13.91□□□□□ -0.18
XIRP2-206ENST00000409728 CCDC88BA6NC98 1476 aa13.89□□□□□ -0.19
XIRP2-206ENST00000409728 PEG3Q9GZU2 1588 aa13.89□□□□□ -0.19
XIRP2-206ENST00000409728 EIF4G1Q04637 1599 aaKnown RBP13.89□□□□□ -0.19
XIRP2-206ENST00000409728 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
XIRP2-206ENST00000409728 BAZ1BQ9UIG0 1483 aaKnown RBP13.87□□□□□ -0.19
XIRP2-206ENST00000409728 TRIM41Q8WV44 630 aa13.86□□□□□ -0.19
XIRP2-206ENST00000409728 NCAPD3P42695 1498 aa13.74□□□□□ -0.21
XIRP2-206ENST00000409728 HMGXB3Q12766 1538 aa13.7□□□□□ -0.22
XIRP2-206ENST00000409728 FAM9AQ8IZU1 332 aaPredicted RBP13.7□□□□□ -0.22
XIRP2-206ENST00000409728 SLC24A1O60721 1099 aa13.68□□□□□ -0.22
XIRP2-206ENST00000409728 CC2D2AQ9P2K1 1620 aa13.68□□□□□ -0.22
XIRP2-206ENST00000409728 ABCC8Q09428 1581 aa13.68□□□□□ -0.22
XIRP2-206ENST00000409728 LOC105371045A0A1W2PR82 267 aa13.66□□□□□ -0.22
XIRP2-206ENST00000409728 EHMT2Q96KQ7 1210 aa13.59□□□□□ -0.23
XIRP2-206ENST00000409728 WRNQ14191 1432 aaPredicted RBP eCLIP13.55□□□□□ -0.24
XIRP2-206ENST00000409728 CFTRP13569 1480 aa13.48□□□□□ -0.25
XIRP2-206ENST00000409728 SYNJ1O43426 1573 aa13.47□□□□□ -0.25
XIRP2-206ENST00000409728 CADPSQ9ULU8 1353 aa13.45□□□□□ -0.26
XIRP2-206ENST00000409728 SOGA1O94964 1423 aa13.45□□□□□ -0.26
XIRP2-206ENST00000409728 DNAJC5BQ9UF47 199 aa13.41□□□□□ -0.26
XIRP2-206ENST00000409728 RUSC2Q8N2Y8 1516 aa13.39□□□□□ -0.27
XIRP2-206ENST00000409728 TOP2BQ02880 1626 aa13.37□□□□□ -0.27
XIRP2-206ENST00000409728 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
XIRP2-206ENST00000409728 PRDM2Q13029 1718 aa13.36□□□□□ -0.27
XIRP2-206ENST00000409728 NESP48681 1621 aa13.35□□□□□ -0.27
XIRP2-206ENST00000409728 EEA1Q15075 1411 aa13.34□□□□□ -0.27
XIRP2-206ENST00000409728 CUX1P39880 1505 aa13.34□□□□□ -0.27
XIRP2-206ENST00000409728 BIVM-ERCC5R4GMW8 1640 aa13.33□□□□□ -0.28
XIRP2-206ENST00000409728 FANCD2Q9BXW9 1451 aa13.31□□□□□ -0.28
XIRP2-206ENST00000409728 UBTFP17480 764 aaKnown RBP13.29□□□□□ -0.28
XIRP2-206ENST00000409728 LAMC3Q9Y6N6 1575 aa13.26□□□□□ -0.29
XIRP2-206ENST00000409728 GOLGA3Q08378 1498 aa13.22□□□□□ -0.29
XIRP2-206ENST00000409728 CEP164Q9UPV0 1460 aa13.22□□□□□ -0.29
XIRP2-206ENST00000409728 PDS5BQ9NTI5 1447 aa13.21□□□□□ -0.3
XIRP2-206ENST00000409728 FGD5Q6ZNL6 1462 aa13.21□□□□□ -0.3
XIRP2-206ENST00000409728 KIF27Q86VH2 1401 aa13.2□□□□□ -0.3
XIRP2-206ENST00000409728 TNIKQ9UKE5 1360 aa13.18□□□□□ -0.3
XIRP2-206ENST00000409728 DNMBPQ6XZF7 1577 aa13.17□□□□□ -0.3
XIRP2-206ENST00000409728 CUX2O14529 1486 aa13.17□□□□□ -0.3
XIRP2-206ENST00000409728 PCGF6Q9BYE7 350 aa13.16□□□□□ -0.3
XIRP2-206ENST00000409728 TOPBP1Q92547 1522 aa13.16□□□□□ -0.3
XIRP2-206ENST00000409728 KIF21BO75037 1637 aa13.16□□□□□ -0.3
XIRP2-206ENST00000409728 CEP162Q5TB80 1403 aa13.16□□□□□ -0.3
XIRP2-206ENST00000409728 RAPGEF2Q9Y4G8 1499 aa13.15□□□□□ -0.3
XIRP2-206ENST00000409728 RANGAP1P46060 587 aaPredicted RBP13.15□□□□□ -0.3
XIRP2-206ENST00000409728 HRCP23327 699 aa13.14□□□□□ -0.31
XIRP2-206ENST00000409728 KIF21AQ7Z4S6 1674 aa13.14□□□□□ -0.31
XIRP2-206ENST00000409728 URB2Q14146 1524 aaKnown RBP13.13□□□□□ -0.31
XIRP2-206ENST00000409728 PPARGC1BQ86YN6 1023 aaKnown RBP13.12□□□□□ -0.31
XIRP2-206ENST00000409728 RAD54L2Q9Y4B4 1467 aa13.12□□□□□ -0.31
XIRP2-206ENST00000409728 POLA1P09884 1462 aaPredicted RBP13.11□□□□□ -0.31
XIRP2-206ENST00000409728 PRXQ9BXM0 1461 aa13.08□□□□□ -0.32
XIRP2-206ENST00000409728 IGF1RP08069 1367 aa13.06□□□□□ -0.32
XIRP2-206ENST00000409728 TRIM26Q12899 539 aaPredicted RBP13.05□□□□□ -0.32
XIRP2-206ENST00000409728 ERICH3Q5RHP9 1530 aa13.04□□□□□ -0.32
XIRP2-206ENST00000409728 CLIP1P30622 1438 aa13.04□□□□□ -0.32
XIRP2-206ENST00000409728 ABCA10Q8WWZ4 1543 aa13.04□□□□□ -0.32
XIRP2-206ENST00000409728 ERCC6Q03468 1493 aa13.02□□□□□ -0.32
XIRP2-206ENST00000409728 CARMIL1Q5VZK9 1371 aa13.02□□□□□ -0.33
XIRP2-206ENST00000409728 MRC2Q9UBG0 1479 aa13.02□□□□□ -0.33
XIRP2-206ENST00000409728 TTBK1Q5TCY1 1321 aaPredicted RBP13.01□□□□□ -0.33
XIRP2-206ENST00000409728 TDRD9Q8NDG6 1382 aaKnown RBP13.01□□□□□ -0.33
XIRP2-206ENST00000409728 WDR97A6NE52 1622 aa12.95□□□□□ -0.34
XIRP2-206ENST00000409728 GAPVD1Q14C86 1478 aa12.94□□□□□ -0.34
XIRP2-206ENST00000409728 TARBP1Q13395 1621 aaKnown RBP12.92□□□□□ -0.34
XIRP2-206ENST00000409728 APLP2Q06481 763 aa12.91□□□□□ -0.34
XIRP2-206ENST00000409728 ABCA5Q8WWZ7 1642 aa12.91□□□□□ -0.34
XIRP2-206ENST00000409728 WDR62O43379 1518 aa12.91□□□□□ -0.34
XIRP2-206ENST00000409728 VPS8Q8N3P4 1428 aa12.91□□□□□ -0.34
XIRP2-206ENST00000409728 AQRO60306 1485 aaKnown RBP eCLIP12.9□□□□□ -0.35
XIRP2-206ENST00000409728 CUL7Q14999 1698 aa12.89□□□□□ -0.35
XIRP2-206ENST00000409728 IFT140Q96RY7 1462 aa12.87□□□□□ -0.35
XIRP2-206ENST00000409728 ARAP1Q96P48 1450 aa12.86□□□□□ -0.35
XIRP2-206ENST00000409728 P3H3Q8IVL6 736 aa12.85□□□□□ -0.35
XIRP2-206ENST00000409728 ZNF608Q9ULD9 1512 aaPredicted RBP12.85□□□□□ -0.35
XIRP2-206ENST00000409728 THOC2Q8NI27 1593 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms