RNA–Protein interactions for RNA: ENST00000407929.6

SLC8A1-208, Transcript of solute carrier family 8 member A1, humanhuman

TSL 5

Gene SLC8A1, Length 3,434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8A1-208ENST00000407929 NISCHQ9Y2I1 1504 aa19.31■□□□□ 0.68
SLC8A1-208ENST00000407929 CCDC180Q9P1Z9 1646 aa17.05■□□□□ 0.32
SLC8A1-208ENST00000407929 ABCC9O60706 1549 aa16.71■□□□□ 0.27
SLC8A1-208ENST00000407929 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
SLC8A1-208ENST00000407929 RB1CC1Q8TDY2 1594 aa16.09■□□□□ 0.17
SLC8A1-208ENST00000407929 NACADO15069 1562 aa16.08■□□□□ 0.16
SLC8A1-208ENST00000407929 ZCCHC6Q5VYS8 1495 aaKnown RBP16.07■□□□□ 0.16
SLC8A1-208ENST00000407929 MYO15BQ96JP2 1530 aa15.97■□□□□ 0.15
SLC8A1-208ENST00000407929 DCAF1Q9Y4B6 1507 aa15.94■□□□□ 0.14
SLC8A1-208ENST00000407929 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.1
SLC8A1-208ENST00000407929 SCRIBQ14160 1630 aa15.63■□□□□ 0.09
SLC8A1-208ENST00000407929 UNC13AQ9UPW8 1703 aa15.56■□□□□ 0.08
SLC8A1-208ENST00000407929 BICRAQ9NZM4 1560 aa15.49■□□□□ 0.07
SLC8A1-208ENST00000407929 SHROOM4Q9ULL8 1493 aa15.45■□□□□ 0.06
SLC8A1-208ENST00000407929 DNAJC5BQ9UF47 199 aa15.2■□□□□ 0.02
SLC8A1-208ENST00000407929 EIF4G1Q04637 1599 aaKnown RBP15.14■□□□□ 0.01
SLC8A1-208ENST00000407929 CC2D2AQ9P2K1 1620 aa15.05■□□□□ -0
SLC8A1-208ENST00000407929 CECR2Q9BXF3 1484 aa15.03■□□□□ -0
SLC8A1-208ENST00000407929 BAZ1AQ9NRL2 1556 aaPredicted RBP14.98□□□□□ -0.01
SLC8A1-208ENST00000407929 SMARCA4P51532 1647 aa14.93□□□□□ -0.02
SLC8A1-208ENST00000407929 SMARCA2P51531 1590 aa14.87□□□□□ -0.03
SLC8A1-208ENST00000407929 MROH2BQ7Z745 1585 aa14.87□□□□□ -0.03
SLC8A1-208ENST00000407929 ATAD2BQ9ULI0 1458 aa14.86□□□□□ -0.03
SLC8A1-208ENST00000407929 NCAPD3P42695 1498 aa14.84□□□□□ -0.03
SLC8A1-208ENST00000407929 BAZ1BQ9UIG0 1483 aaKnown RBP14.79□□□□□ -0.04
SLC8A1-208ENST00000407929 RSF1Q96T23 1441 aaPredicted RBP14.77□□□□□ -0.04
SLC8A1-208ENST00000407929 HMGXB3Q12766 1538 aa14.74□□□□□ -0.05
SLC8A1-208ENST00000407929 PEG3Q9GZU2 1588 aa14.74□□□□□ -0.05
SLC8A1-208ENST00000407929 WIZO95785 1651 aa14.7□□□□□ -0.06
SLC8A1-208ENST00000407929 SUPT5HO00267 1087 aaKnown RBP14.67□□□□□ -0.06
SLC8A1-208ENST00000407929 TOP2AP11388 1531 aaKnown RBP14.57□□□□□ -0.08
SLC8A1-208ENST00000407929 CADPSQ9ULU8 1353 aa14.47□□□□□ -0.09
SLC8A1-208ENST00000407929 ERCC6Q03468 1493 aa14.46□□□□□ -0.09
SLC8A1-208ENST00000407929 NESP48681 1621 aa14.44□□□□□ -0.1
SLC8A1-208ENST00000407929 CCDC88BA6NC98 1476 aa14.43□□□□□ -0.1
SLC8A1-208ENST00000407929 LAMC3Q9Y6N6 1575 aa14.42□□□□□ -0.1
SLC8A1-208ENST00000407929 PDS5BQ9NTI5 1447 aa14.42□□□□□ -0.1
SLC8A1-208ENST00000407929 CFTRP13569 1480 aa14.35□□□□□ -0.11
SLC8A1-208ENST00000407929 FANCD2Q9BXW9 1451 aa14.28□□□□□ -0.12
SLC8A1-208ENST00000407929 CEP164Q9UPV0 1460 aa14.26□□□□□ -0.13
SLC8A1-208ENST00000407929 KIF21AQ7Z4S6 1674 aa14.21□□□□□ -0.13
SLC8A1-208ENST00000407929 MRC2Q9UBG0 1479 aa14.2□□□□□ -0.14
SLC8A1-208ENST00000407929 CUX2O14529 1486 aa14.17□□□□□ -0.14
SLC8A1-208ENST00000407929 PRDM2Q13029 1718 aa14.14□□□□□ -0.15
SLC8A1-208ENST00000407929 PELP1Q8IZL8 1130 aaKnown RBP14.12□□□□□ -0.15
SLC8A1-208ENST00000407929 THOC2Q8NI27 1593 aaKnown RBP14.12□□□□□ -0.15
SLC8A1-208ENST00000407929 ABCC8Q09428 1581 aa14.1□□□□□ -0.15
SLC8A1-208ENST00000407929 WDR62O43379 1518 aa14.08□□□□□ -0.16
SLC8A1-208ENST00000407929 URB2Q14146 1524 aaKnown RBP14.07□□□□□ -0.16
SLC8A1-208ENST00000407929 TOPBP1Q92547 1522 aa14.03□□□□□ -0.16
SLC8A1-208ENST00000407929 MYT1Q01538 1121 aa14.02□□□□□ -0.16
SLC8A1-208ENST00000407929 DNMBPQ6XZF7 1577 aa14.02□□□□□ -0.17
SLC8A1-208ENST00000407929 WRNQ14191 1432 aaPredicted RBP eCLIP13.98□□□□□ -0.17
SLC8A1-208ENST00000407929 IFT140Q96RY7 1462 aa13.95□□□□□ -0.18
SLC8A1-208ENST00000407929 SOGA1O94964 1423 aa13.94□□□□□ -0.18
SLC8A1-208ENST00000407929 CUX1P39880 1505 aa13.94□□□□□ -0.18
SLC8A1-208ENST00000407929 POLA1P09884 1462 aaPredicted RBP13.92□□□□□ -0.18
SLC8A1-208ENST00000407929 FGD5Q6ZNL6 1462 aa13.92□□□□□ -0.18
SLC8A1-208ENST00000407929 RAD54L2Q9Y4B4 1467 aa13.88□□□□□ -0.19
SLC8A1-208ENST00000407929 TDRD9Q8NDG6 1382 aaKnown RBP13.85□□□□□ -0.19
SLC8A1-208ENST00000407929 TRIM41Q8WV44 630 aa13.85□□□□□ -0.19
SLC8A1-208ENST00000407929 TOP2BQ02880 1626 aa13.85□□□□□ -0.19
SLC8A1-208ENST00000407929 ZNF608Q9ULD9 1512 aaPredicted RBP13.84□□□□□ -0.19
SLC8A1-208ENST00000407929 SYNJ1O43426 1573 aa13.83□□□□□ -0.2
SLC8A1-208ENST00000407929 AQRO60306 1485 aaKnown RBP eCLIP13.83□□□□□ -0.2
SLC8A1-208ENST00000407929 BIVM-ERCC5R4GMW8 1640 aa13.81□□□□□ -0.2
SLC8A1-208ENST00000407929 TARBP1Q13395 1621 aaKnown RBP13.8□□□□□ -0.2
SLC8A1-208ENST00000407929 FBLN2P98095 1184 aa13.8□□□□□ -0.2
SLC8A1-208ENST00000407929 ABCA10Q8WWZ4 1543 aa13.77□□□□□ -0.2
SLC8A1-208ENST00000407929 GAPVD1Q14C86 1478 aa13.76□□□□□ -0.21
SLC8A1-208ENST00000407929 EIF4G3O43432 1585 aaKnown RBP13.75□□□□□ -0.21
SLC8A1-208ENST00000407929 GRIN2BQ13224 1484 aa13.74□□□□□ -0.21
SLC8A1-208ENST00000407929 OSCARQ8IYS5 282 aa13.74□□□□□ -0.21
SLC8A1-208ENST00000407929 CHMP7Q8WUX9 453 aaPredicted RBP13.74□□□□□ -0.21
SLC8A1-208ENST00000407929 WDR97A6NE52 1622 aa13.73□□□□□ -0.21
SLC8A1-208ENST00000407929 KIF27Q86VH2 1401 aa13.71□□□□□ -0.21
SLC8A1-208ENST00000407929 SNAPC4Q5SXM2 1469 aa13.68□□□□□ -0.22
SLC8A1-208ENST00000407929 DNAJC5Q9H3Z4 198 aa13.68□□□□□ -0.22
SLC8A1-208ENST00000407929 CHIC1Q5VXU3 224 aa13.67□□□□□ -0.22
SLC8A1-208ENST00000407929 MAGI1Q96QZ7 1491 aaPredicted RBP13.67□□□□□ -0.22
SLC8A1-208ENST00000407929 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
SLC8A1-208ENST00000407929 SYNJ2O15056 1496 aa13.62□□□□□ -0.23
SLC8A1-208ENST00000407929 ERICH3Q5RHP9 1530 aa13.61□□□□□ -0.23
SLC8A1-208ENST00000407929 PBRM1Q86U86 1689 aa13.61□□□□□ -0.23
SLC8A1-208ENST00000407929 FHAD1B1AJZ9 1412 aa13.6□□□□□ -0.23
SLC8A1-208ENST00000407929 IGF1RP08069 1367 aa13.6□□□□□ -0.23
SLC8A1-208ENST00000407929 FAM9AQ8IZU1 332 aaPredicted RBP13.57□□□□□ -0.24
SLC8A1-208ENST00000407929 CARMIL1Q5VZK9 1371 aa13.56□□□□□ -0.24
SLC8A1-208ENST00000407929 TTBK1Q5TCY1 1321 aaPredicted RBP13.55□□□□□ -0.24
SLC8A1-208ENST00000407929 CHD1O14646 1710 aa13.54□□□□□ -0.24
SLC8A1-208ENST00000407929 GRIN2AQ12879 1464 aa13.53□□□□□ -0.24
SLC8A1-208ENST00000407929 CSRNP3Q8WYN3 585 aa13.53□□□□□ -0.24
SLC8A1-208ENST00000407929 ADAMTS12P58397 1594 aa13.53□□□□□ -0.24
SLC8A1-208ENST00000407929 RUSC2Q8N2Y8 1516 aa13.52□□□□□ -0.24
SLC8A1-208ENST00000407929 EEA1Q15075 1411 aa13.51□□□□□ -0.25
SLC8A1-208ENST00000407929 CUL7Q14999 1698 aa13.5□□□□□ -0.25
SLC8A1-208ENST00000407929 RAPGEF2Q9Y4G8 1499 aa13.46□□□□□ -0.25
SLC8A1-208ENST00000407929 NUP160Q12769 1436 aa13.44□□□□□ -0.26
SLC8A1-208ENST00000407929 JPH4Q96JJ6 628 aa13.44□□□□□ -0.26
SLC8A1-208ENST00000407929 EHMT2Q96KQ7 1210 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms