RNA–Protein interactions for RNA: ENST00000401554.5

TBC1D1-202, Transcript of TBC1 domain family member 1, humanhuman

TSL 2

Gene TBC1D1, Length 1,713 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-202ENST00000401554 NISCHQ9Y2I1 1504 aa43.74■■■■■ 4.59
TBC1D1-202ENST00000401554 CCDC180Q9P1Z9 1646 aa38.64■■■■□ 3.78
TBC1D1-202ENST00000401554 ABCC9O60706 1549 aa37.55■■■■□ 3.6
TBC1D1-202ENST00000401554 ZCCHC6Q5VYS8 1495 aaKnown RBP36.5■■■■□ 3.43
TBC1D1-202ENST00000401554 DCAF8L2P0C7V8 631 aa36.47■■■■□ 3.43
TBC1D1-202ENST00000401554 NACADO15069 1562 aa36.26■■■■□ 3.4
TBC1D1-202ENST00000401554 RB1CC1Q8TDY2 1594 aa36.21■■■■□ 3.39
TBC1D1-202ENST00000401554 DCAF1Q9Y4B6 1507 aa36.16■■■■□ 3.38
TBC1D1-202ENST00000401554 MYO15BQ96JP2 1530 aa36.15■■■■□ 3.38
TBC1D1-202ENST00000401554 UNC13AQ9UPW8 1703 aa35.45■■■■□ 3.27
TBC1D1-202ENST00000401554 SCRIBQ14160 1630 aa35.37■■■■□ 3.25
TBC1D1-202ENST00000401554 PABPN1Q86U42 306 aaKnown RBP eCLIP35.2■■■■□ 3.23
TBC1D1-202ENST00000401554 BICRAQ9NZM4 1560 aa35.17■■■■□ 3.22
TBC1D1-202ENST00000401554 SHROOM4Q9ULL8 1493 aa34.86■■■■□ 3.17
TBC1D1-202ENST00000401554 DNAJC5BQ9UF47 199 aa34.21■■■■□ 3.07
TBC1D1-202ENST00000401554 EIF4G1Q04637 1599 aaKnown RBP34.18■■■■□ 3.06
TBC1D1-202ENST00000401554 CECR2Q9BXF3 1484 aa34.09■■■■□ 3.05
TBC1D1-202ENST00000401554 CC2D2AQ9P2K1 1620 aa33.96■■■■□ 3.03
TBC1D1-202ENST00000401554 BAZ1AQ9NRL2 1556 aaPredicted RBP33.84■■■■□ 3.01
TBC1D1-202ENST00000401554 SMARCA4P51532 1647 aa33.84■■■■□ 3.01
TBC1D1-202ENST00000401554 MROH2BQ7Z745 1585 aa33.75■■■□□ 2.99
TBC1D1-202ENST00000401554 ATAD2BQ9ULI0 1458 aa33.59■■■□□ 2.97
TBC1D1-202ENST00000401554 SMARCA2P51531 1590 aa33.51■■■□□ 2.95
TBC1D1-202ENST00000401554 RSF1Q96T23 1441 aaPredicted RBP33.5■■■□□ 2.95
TBC1D1-202ENST00000401554 NCAPD3P42695 1498 aa33.5■■■□□ 2.95
TBC1D1-202ENST00000401554 PEG3Q9GZU2 1588 aa33.49■■■□□ 2.95
TBC1D1-202ENST00000401554 WIZO95785 1651 aa33.4■■■□□ 2.94
TBC1D1-202ENST00000401554 HMGXB3Q12766 1538 aa33.33■■■□□ 2.93
TBC1D1-202ENST00000401554 BAZ1BQ9UIG0 1483 aaKnown RBP33.31■■■□□ 2.92
TBC1D1-202ENST00000401554 TOP2AP11388 1531 aaKnown RBP33.01■■■□□ 2.88
TBC1D1-202ENST00000401554 SUPT5HO00267 1087 aaKnown RBP32.99■■■□□ 2.87
TBC1D1-202ENST00000401554 CCDC88BA6NC98 1476 aa32.67■■■□□ 2.82
TBC1D1-202ENST00000401554 NESP48681 1621 aa32.63■■■□□ 2.81
TBC1D1-202ENST00000401554 CADPSQ9ULU8 1353 aa32.55■■■□□ 2.8
TBC1D1-202ENST00000401554 LAMC3Q9Y6N6 1575 aa32.51■■■□□ 2.8
TBC1D1-202ENST00000401554 CFTRP13569 1480 aa32.43■■■□□ 2.78
TBC1D1-202ENST00000401554 PDS5BQ9NTI5 1447 aa32.29■■■□□ 2.76
TBC1D1-202ENST00000401554 ERCC6Q03468 1493 aa32.29■■■□□ 2.76
TBC1D1-202ENST00000401554 KIF21AQ7Z4S6 1674 aa32.21■■■□□ 2.75
TBC1D1-202ENST00000401554 FANCD2Q9BXW9 1451 aa32.17■■■□□ 2.74
TBC1D1-202ENST00000401554 PRDM2Q13029 1718 aa32.16■■■□□ 2.74
TBC1D1-202ENST00000401554 CEP164Q9UPV0 1460 aa32.07■■■□□ 2.72
TBC1D1-202ENST00000401554 THOC2Q8NI27 1593 aaKnown RBP31.99■■■□□ 2.71
TBC1D1-202ENST00000401554 MRC2Q9UBG0 1479 aa31.95■■■□□ 2.7
TBC1D1-202ENST00000401554 URB2Q14146 1524 aaKnown RBP31.84■■■□□ 2.69
TBC1D1-202ENST00000401554 WDR62O43379 1518 aa31.83■■■□□ 2.69
TBC1D1-202ENST00000401554 CUX2O14529 1486 aa31.78■■■□□ 2.68
TBC1D1-202ENST00000401554 TOPBP1Q92547 1522 aa31.7■■■□□ 2.67
TBC1D1-202ENST00000401554 DNMBPQ6XZF7 1577 aa31.66■■■□□ 2.66
TBC1D1-202ENST00000401554 ABCC8Q09428 1581 aa31.66■■■□□ 2.66
TBC1D1-202ENST00000401554 CUX1P39880 1505 aa31.62■■■□□ 2.65
TBC1D1-202ENST00000401554 WRNQ14191 1432 aaPredicted RBP eCLIP31.55■■■□□ 2.64
TBC1D1-202ENST00000401554 POLA1P09884 1462 aaPredicted RBP31.47■■■□□ 2.63
TBC1D1-202ENST00000401554 SYNJ1O43426 1573 aa31.47■■■□□ 2.63
TBC1D1-202ENST00000401554 FGD5Q6ZNL6 1462 aa31.44■■■□□ 2.62
TBC1D1-202ENST00000401554 TOP2BQ02880 1626 aa31.42■■■□□ 2.62
TBC1D1-202ENST00000401554 BIVM-ERCC5R4GMW8 1640 aa31.4■■■□□ 2.62
TBC1D1-202ENST00000401554 IFT140Q96RY7 1462 aa31.38■■■□□ 2.61
TBC1D1-202ENST00000401554 RAD54L2Q9Y4B4 1467 aa31.36■■■□□ 2.61
TBC1D1-202ENST00000401554 SOGA1O94964 1423 aa31.35■■■□□ 2.61
TBC1D1-202ENST00000401554 TARBP1Q13395 1621 aaKnown RBP31.33■■■□□ 2.61
TBC1D1-202ENST00000401554 ZNF608Q9ULD9 1512 aaPredicted RBP31.28■■■□□ 2.6
TBC1D1-202ENST00000401554 TDRD9Q8NDG6 1382 aaKnown RBP31.16■■■□□ 2.58
TBC1D1-202ENST00000401554 AQRO60306 1485 aaKnown RBP eCLIP31.15■■■□□ 2.58
TBC1D1-202ENST00000401554 ABCA10Q8WWZ4 1543 aa31.14■■■□□ 2.58
TBC1D1-202ENST00000401554 WDR97A6NE52 1622 aa31.13■■■□□ 2.57
TBC1D1-202ENST00000401554 EIF4G3O43432 1585 aaKnown RBP31.11■■■□□ 2.57
TBC1D1-202ENST00000401554 TRIM41Q8WV44 630 aa31.1■■■□□ 2.57
TBC1D1-202ENST00000401554 CHIC1Q5VXU3 224 aa31■■■□□ 2.55
TBC1D1-202ENST00000401554 GAPVD1Q14C86 1478 aa30.98■■■□□ 2.55
TBC1D1-202ENST00000401554 ABCA5Q8WWZ7 1642 aa30.98■■■□□ 2.55
TBC1D1-202ENST00000401554 GRIN2BQ13224 1484 aa30.9■■■□□ 2.54
TBC1D1-202ENST00000401554 PBRM1Q86U86 1689 aa30.86■■■□□ 2.53
TBC1D1-202ENST00000401554 KIF27Q86VH2 1401 aa30.84■■■□□ 2.53
TBC1D1-202ENST00000401554 SNAPC4Q5SXM2 1469 aa30.83■■■□□ 2.53
TBC1D1-202ENST00000401554 RUSC2Q8N2Y8 1516 aa30.77■■■□□ 2.52
TBC1D1-202ENST00000401554 MAGI1Q96QZ7 1491 aaPredicted RBP30.77■■■□□ 2.52
TBC1D1-202ENST00000401554 ERICH3Q5RHP9 1530 aa30.76■■■□□ 2.51
TBC1D1-202ENST00000401554 IGF1RP08069 1367 aa30.73■■■□□ 2.51
TBC1D1-202ENST00000401554 FBLN2P98095 1184 aa30.7■■■□□ 2.51
TBC1D1-202ENST00000401554 SYNJ2O15056 1496 aa30.66■■■□□ 2.5
TBC1D1-202ENST00000401554 CHD1O14646 1710 aa30.65■■■□□ 2.5
TBC1D1-202ENST00000401554 CHMP7Q8WUX9 453 aaPredicted RBP30.65■■■□□ 2.5
TBC1D1-202ENST00000401554 ADAMTS12P58397 1594 aa30.65■■■□□ 2.5
TBC1D1-202ENST00000401554 FHAD1B1AJZ9 1412 aa30.62■■■□□ 2.49
TBC1D1-202ENST00000401554 OSCARQ8IYS5 282 aa30.6■■■□□ 2.49
TBC1D1-202ENST00000401554 CUL7Q14999 1698 aa30.53■■■□□ 2.48
TBC1D1-202ENST00000401554 GRIN2AQ12879 1464 aa30.53■■■□□ 2.48
TBC1D1-202ENST00000401554 CARMIL1Q5VZK9 1371 aa30.52■■■□□ 2.48
TBC1D1-202ENST00000401554 FAM9AQ8IZU1 332 aaPredicted RBP30.5■■■□□ 2.47
TBC1D1-202ENST00000401554 EEA1Q15075 1411 aa30.46■■■□□ 2.47
TBC1D1-202ENST00000401554 CSRNP3Q8WYN3 585 aa30.45■■■□□ 2.47
TBC1D1-202ENST00000401554 DNAJC5Q9H3Z4 198 aa30.44■■■□□ 2.46
TBC1D1-202ENST00000401554 CEP170Q5SW79 1584 aa30.37■■■□□ 2.45
TBC1D1-202ENST00000401554 NUP160Q12769 1436 aa30.37■■■□□ 2.45
TBC1D1-202ENST00000401554 PRXQ9BXM0 1461 aa30.37■■■□□ 2.45
TBC1D1-202ENST00000401554 RAPGEF2Q9Y4G8 1499 aa30.36■■■□□ 2.45
TBC1D1-202ENST00000401554 CLASP1Q7Z460 1538 aa30.32■■■□□ 2.44
TBC1D1-202ENST00000401554 KIAA0586Q9BVV6 1533 aa30.17■■■□□ 2.42
TBC1D1-202ENST00000401554 KIF21BO75037 1637 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms