RNA–Protein interactions for RNA: ENST00000399751.6

LINC00680-201, long intergenic non-protein coding RNA 680, humanhuman

TSL 1 (best)

Gene LINC00680, Length 1,621 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00680-201ENST00000399751 NISCHQ9Y2I1 1504 aa33.28■■■□□ 2.92
LINC00680-201ENST00000399751 CCDC180Q9P1Z9 1646 aa29.22■■■□□ 2.27
LINC00680-201ENST00000399751 ABCC9O60706 1549 aa28.67■■■□□ 2.18
LINC00680-201ENST00000399751 ZCCHC6Q5VYS8 1495 aaKnown RBP27.86■■■□□ 2.05
LINC00680-201ENST00000399751 DCAF8L2P0C7V8 631 aa27.71■■■□□ 2.03
LINC00680-201ENST00000399751 DCAF1Q9Y4B6 1507 aa27.51■■□□□ 1.99
LINC00680-201ENST00000399751 RB1CC1Q8TDY2 1594 aa27.42■■□□□ 1.98
LINC00680-201ENST00000399751 MYO15BQ96JP2 1530 aa27.35■■□□□ 1.97
LINC00680-201ENST00000399751 NACADO15069 1562 aa27.34■■□□□ 1.97
LINC00680-201ENST00000399751 SHROOM4Q9ULL8 1493 aa26.88■■□□□ 1.89
LINC00680-201ENST00000399751 UNC13AQ9UPW8 1703 aa26.84■■□□□ 1.89
LINC00680-201ENST00000399751 SCRIBQ14160 1630 aa26.82■■□□□ 1.88
LINC00680-201ENST00000399751 PABPN1Q86U42 306 aaKnown RBP eCLIP26.72■■□□□ 1.87
LINC00680-201ENST00000399751 BICRAQ9NZM4 1560 aa26.72■■□□□ 1.87
LINC00680-201ENST00000399751 DNAJC5BQ9UF47 199 aa26.69■■□□□ 1.86
LINC00680-201ENST00000399751 EIF4G1Q04637 1599 aaKnown RBP25.98■■□□□ 1.75
LINC00680-201ENST00000399751 CC2D2AQ9P2K1 1620 aa25.94■■□□□ 1.74
LINC00680-201ENST00000399751 CECR2Q9BXF3 1484 aa25.87■■□□□ 1.73
LINC00680-201ENST00000399751 BAZ1AQ9NRL2 1556 aaPredicted RBP25.76■■□□□ 1.71
LINC00680-201ENST00000399751 SUPT5HO00267 1087 aaKnown RBP25.7■■□□□ 1.7
LINC00680-201ENST00000399751 MROH2BQ7Z745 1585 aa25.68■■□□□ 1.7
LINC00680-201ENST00000399751 SMARCA4P51532 1647 aa25.67■■□□□ 1.7
LINC00680-201ENST00000399751 RSF1Q96T23 1441 aaPredicted RBP25.65■■□□□ 1.7
LINC00680-201ENST00000399751 WIZO95785 1651 aa25.45■■□□□ 1.67
LINC00680-201ENST00000399751 PEG3Q9GZU2 1588 aa25.36■■□□□ 1.65
LINC00680-201ENST00000399751 SMARCA2P51531 1590 aa25.36■■□□□ 1.65
LINC00680-201ENST00000399751 ATAD2BQ9ULI0 1458 aa25.35■■□□□ 1.65
LINC00680-201ENST00000399751 NCAPD3P42695 1498 aa25.27■■□□□ 1.64
LINC00680-201ENST00000399751 BAZ1BQ9UIG0 1483 aaKnown RBP25.22■■□□□ 1.63
LINC00680-201ENST00000399751 TOP2AP11388 1531 aaKnown RBP25.19■■□□□ 1.62
LINC00680-201ENST00000399751 HMGXB3Q12766 1538 aa25.14■■□□□ 1.62
LINC00680-201ENST00000399751 CCDC88BA6NC98 1476 aa24.92■■□□□ 1.58
LINC00680-201ENST00000399751 NESP48681 1621 aa24.75■■□□□ 1.55
LINC00680-201ENST00000399751 ERCC6Q03468 1493 aa24.67■■□□□ 1.54
LINC00680-201ENST00000399751 LAMC3Q9Y6N6 1575 aa24.61■■□□□ 1.53
LINC00680-201ENST00000399751 CUX2O14529 1486 aa24.61■■□□□ 1.53
LINC00680-201ENST00000399751 CADPSQ9ULU8 1353 aa24.55■■□□□ 1.52
LINC00680-201ENST00000399751 CFTRP13569 1480 aa24.54■■□□□ 1.52
LINC00680-201ENST00000399751 THOC2Q8NI27 1593 aaKnown RBP24.47■■□□□ 1.51
LINC00680-201ENST00000399751 PDS5BQ9NTI5 1447 aa24.42■■□□□ 1.5
LINC00680-201ENST00000399751 KIF21AQ7Z4S6 1674 aa24.42■■□□□ 1.5
LINC00680-201ENST00000399751 PRDM2Q13029 1718 aa24.37■■□□□ 1.49
LINC00680-201ENST00000399751 CHIC1Q5VXU3 224 aa24.34■■□□□ 1.49
LINC00680-201ENST00000399751 FANCD2Q9BXW9 1451 aa24.27■■□□□ 1.48
LINC00680-201ENST00000399751 ABCC8Q09428 1581 aa24.27■■□□□ 1.48
LINC00680-201ENST00000399751 DNAJC5Q9H3Z4 198 aa24.23■■□□□ 1.47
LINC00680-201ENST00000399751 MRC2Q9UBG0 1479 aa24.23■■□□□ 1.47
LINC00680-201ENST00000399751 TRIM41Q8WV44 630 aa24.21■■□□□ 1.47
LINC00680-201ENST00000399751 WDR62O43379 1518 aa24.2■■□□□ 1.46
LINC00680-201ENST00000399751 WRNQ14191 1432 aaPredicted RBP eCLIP24.19■■□□□ 1.46
LINC00680-201ENST00000399751 CEP164Q9UPV0 1460 aa24.18■■□□□ 1.46
LINC00680-201ENST00000399751 SYNJ1O43426 1573 aa24.07■■□□□ 1.44
LINC00680-201ENST00000399751 CUX1P39880 1505 aa24.04■■□□□ 1.44
LINC00680-201ENST00000399751 URB2Q14146 1524 aaKnown RBP24.02■■□□□ 1.44
LINC00680-201ENST00000399751 TOP2BQ02880 1626 aa24.02■■□□□ 1.44
LINC00680-201ENST00000399751 BIVM-ERCC5R4GMW8 1640 aa23.99■■□□□ 1.43
LINC00680-201ENST00000399751 DNMBPQ6XZF7 1577 aa23.98■■□□□ 1.43
LINC00680-201ENST00000399751 TOPBP1Q92547 1522 aa23.96■■□□□ 1.43
LINC00680-201ENST00000399751 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
LINC00680-201ENST00000399751 POLA1P09884 1462 aaPredicted RBP23.81■■□□□ 1.4
LINC00680-201ENST00000399751 SOGA1O94964 1423 aa23.75■■□□□ 1.39
LINC00680-201ENST00000399751 FAM9AQ8IZU1 332 aaPredicted RBP23.73■■□□□ 1.39
LINC00680-201ENST00000399751 RAD54L2Q9Y4B4 1467 aa23.72■■□□□ 1.39
LINC00680-201ENST00000399751 IFT140Q96RY7 1462 aa23.69■■□□□ 1.38
LINC00680-201ENST00000399751 ZNF608Q9ULD9 1512 aaPredicted RBP23.66■■□□□ 1.38
LINC00680-201ENST00000399751 RUSC2Q8N2Y8 1516 aa23.65■■□□□ 1.38
LINC00680-201ENST00000399751 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.38
LINC00680-201ENST00000399751 EEA1Q15075 1411 aa23.64■■□□□ 1.37
LINC00680-201ENST00000399751 KIF27Q86VH2 1401 aa23.64■■□□□ 1.37
LINC00680-201ENST00000399751 TARBP1Q13395 1621 aaKnown RBP23.61■■□□□ 1.37
LINC00680-201ENST00000399751 WDR97A6NE52 1622 aa23.57■■□□□ 1.36
LINC00680-201ENST00000399751 CSRNP3Q8WYN3 585 aa23.55■■□□□ 1.36
LINC00680-201ENST00000399751 TDRD9Q8NDG6 1382 aaKnown RBP23.55■■□□□ 1.36
LINC00680-201ENST00000399751 EIF4G3O43432 1585 aaKnown RBP23.53■■□□□ 1.36
LINC00680-201ENST00000399751 GAPVD1Q14C86 1478 aa23.48■■□□□ 1.35
LINC00680-201ENST00000399751 ABCA5Q8WWZ7 1642 aa23.47■■□□□ 1.35
LINC00680-201ENST00000399751 AQRO60306 1485 aaKnown RBP eCLIP23.46■■□□□ 1.35
LINC00680-201ENST00000399751 OSCARQ8IYS5 282 aa23.45■■□□□ 1.34
LINC00680-201ENST00000399751 IGF1RP08069 1367 aa23.43■■□□□ 1.34
LINC00680-201ENST00000399751 EHMT2Q96KQ7 1210 aa23.42■■□□□ 1.34
LINC00680-201ENST00000399751 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
LINC00680-201ENST00000399751 ERICH3Q5RHP9 1530 aa23.37■■□□□ 1.33
LINC00680-201ENST00000399751 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
LINC00680-201ENST00000399751 PBRM1Q86U86 1689 aa23.35■■□□□ 1.33
LINC00680-201ENST00000399751 CARMIL1Q5VZK9 1371 aa23.33■■□□□ 1.33
LINC00680-201ENST00000399751 PRXQ9BXM0 1461 aa23.32■■□□□ 1.32
LINC00680-201ENST00000399751 KIF21BO75037 1637 aa23.32■■□□□ 1.32
LINC00680-201ENST00000399751 CUL7Q14999 1698 aa23.3■■□□□ 1.32
LINC00680-201ENST00000399751 GOLGA3Q08378 1498 aa23.28■■□□□ 1.32
LINC00680-201ENST00000399751 RAPGEF2Q9Y4G8 1499 aa23.26■■□□□ 1.31
LINC00680-201ENST00000399751 CHD1O14646 1710 aa23.26■■□□□ 1.31
LINC00680-201ENST00000399751 UBTFP17480 764 aaKnown RBP23.26■■□□□ 1.31
LINC00680-201ENST00000399751 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
LINC00680-201ENST00000399751 FHAD1B1AJZ9 1412 aa23.22■■□□□ 1.31
LINC00680-201ENST00000399751 MAGI1Q96QZ7 1491 aaPredicted RBP23.21■■□□□ 1.31
LINC00680-201ENST00000399751 ADAMTS12P58397 1594 aa23.2■■□□□ 1.3
LINC00680-201ENST00000399751 RIMBP3CA6NJZ7 1639 aa23.18■■□□□ 1.3
LINC00680-201ENST00000399751 RIMBP3BA6NNM3 1639 aa23.18■■□□□ 1.3
LINC00680-201ENST00000399751 RIMBP3Q9UFD9 1639 aa23.18■■□□□ 1.3
LINC00680-201ENST00000399751 ARHGEF11O15085 1522 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms