RNA–Protein interactions for RNA: ENST00000398565.2

SDHCP2-201, Transcript of succinate dehydrogenase complex subunit C pseudogene 2, humanhuman

BASIC

Gene SDHCP2, Length 501 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCP2-201ENST00000398565 NISCHQ9Y2I1 1504 aa10.8□□□□□ -0.68
SDHCP2-201ENST00000398565 AEBP2Q6ZN18 517 aaPredicted RBP10.61□□□□□ -0.71
SDHCP2-201ENST00000398565 CHIC1Q5VXU3 224 aa10.33□□□□□ -0.76
SDHCP2-201ENST00000398565 CCDC180Q9P1Z9 1646 aa9.61□□□□□ -0.87
SDHCP2-201ENST00000398565 MYO15BQ96JP2 1530 aa9.15□□□□□ -0.94
SDHCP2-201ENST00000398565 DCAF1Q9Y4B6 1507 aa9.11□□□□□ -0.95
SDHCP2-201ENST00000398565 PHF23Q9BUL5 403 aaPredicted RBP9.09□□□□□ -0.95
SDHCP2-201ENST00000398565 ABCC9O60706 1549 aa9.05□□□□□ -0.96
SDHCP2-201ENST00000398565 NACADO15069 1562 aa9.04□□□□□ -0.96
SDHCP2-201ENST00000398565 ZCCHC6Q5VYS8 1495 aaKnown RBP9.02□□□□□ -0.96
SDHCP2-201ENST00000398565 SENP3Q9H4L4 574 aaPredicted RBP9.01□□□□□ -0.97
SDHCP2-201ENST00000398565 RB1CC1Q8TDY2 1594 aa8.97□□□□□ -0.97
SDHCP2-201ENST00000398565 SHROOM4Q9ULL8 1493 aa8.82□□□□□ -1
SDHCP2-201ENST00000398565 DCAF8L2P0C7V8 631 aa8.78□□□□□ -1
SDHCP2-201ENST00000398565 BICRAQ9NZM4 1560 aa8.57□□□□□ -1.04
SDHCP2-201ENST00000398565 UNC13AQ9UPW8 1703 aa8.56□□□□□ -1.04
SDHCP2-201ENST00000398565 SCRIBQ14160 1630 aa8.54□□□□□ -1.04
SDHCP2-201ENST00000398565 PABPN1Q86U42 306 aaKnown RBP eCLIP8.44□□□□□ -1.06
SDHCP2-201ENST00000398565 BAZ1AQ9NRL2 1556 aaPredicted RBP8.41□□□□□ -1.06
SDHCP2-201ENST00000398565 PLPPR3Q6T4P5 718 aa8.39□□□□□ -1.07
SDHCP2-201ENST00000398565 EIF4G1Q04637 1599 aaKnown RBP8.37□□□□□ -1.07
SDHCP2-201ENST00000398565 FOXD1Q16676 465 aa8.37□□□□□ -1.07
SDHCP2-201ENST00000398565 PEG3Q9GZU2 1588 aa8.35□□□□□ -1.07
SDHCP2-201ENST00000398565 SMARCA2P51531 1590 aa8.35□□□□□ -1.07
SDHCP2-201ENST00000398565 NCAPD3P42695 1498 aa8.34□□□□□ -1.07
SDHCP2-201ENST00000398565 SMARCA4P51532 1647 aa8.31□□□□□ -1.08
SDHCP2-201ENST00000398565 HMGXB3Q12766 1538 aa8.29□□□□□ -1.08
SDHCP2-201ENST00000398565 ATAD2BQ9ULI0 1458 aa8.26□□□□□ -1.09
SDHCP2-201ENST00000398565 CC2D2AQ9P2K1 1620 aa8.26□□□□□ -1.09
SDHCP2-201ENST00000398565 CECR2Q9BXF3 1484 aa8.26□□□□□ -1.09
SDHCP2-201ENST00000398565 RSF1Q96T23 1441 aaPredicted RBP8.24□□□□□ -1.09
SDHCP2-201ENST00000398565 MROH2BQ7Z745 1585 aa8.22□□□□□ -1.09
SDHCP2-201ENST00000398565 BAZ1BQ9UIG0 1483 aaKnown RBP8.19□□□□□ -1.1
SDHCP2-201ENST00000398565 TOP2AP11388 1531 aaKnown RBP8.15□□□□□ -1.1
SDHCP2-201ENST00000398565 DNAJC5BQ9UF47 199 aa8.15□□□□□ -1.1
SDHCP2-201ENST00000398565 WIZO95785 1651 aa8.09□□□□□ -1.11
SDHCP2-201ENST00000398565 LAMC3Q9Y6N6 1575 aa8.07□□□□□ -1.12
SDHCP2-201ENST00000398565 ADRA2BP18089 450 aa8.06□□□□□ -1.12
SDHCP2-201ENST00000398565 CADPSQ9ULU8 1353 aa8.06□□□□□ -1.12
SDHCP2-201ENST00000398565 PPP6R1Q9UPN7 881 aa8.05□□□□□ -1.12
SDHCP2-201ENST00000398565 PDS5BQ9NTI5 1447 aa8.04□□□□□ -1.12
SDHCP2-201ENST00000398565 CFTRP13569 1480 aa8.04□□□□□ -1.12
SDHCP2-201ENST00000398565 CCDC88BA6NC98 1476 aa8.01□□□□□ -1.13
SDHCP2-201ENST00000398565 ABCC8Q09428 1581 aa7.98□□□□□ -1.13
SDHCP2-201ENST00000398565 SUPT5HO00267 1087 aaKnown RBP7.97□□□□□ -1.13
SDHCP2-201ENST00000398565 PRDM2Q13029 1718 aa7.92□□□□□ -1.14
SDHCP2-201ENST00000398565 PIAS4Q8N2W9 510 aaPredicted RBP7.91□□□□□ -1.14
SDHCP2-201ENST00000398565 CEP164Q9UPV0 1460 aa7.9□□□□□ -1.14
SDHCP2-201ENST00000398565 CUX2O14529 1486 aa7.89□□□□□ -1.15
SDHCP2-201ENST00000398565 ERCC6Q03468 1493 aa7.89□□□□□ -1.15
SDHCP2-201ENST00000398565 FANCD2Q9BXW9 1451 aa7.89□□□□□ -1.15
SDHCP2-201ENST00000398565 MRC2Q9UBG0 1479 aa7.87□□□□□ -1.15
SDHCP2-201ENST00000398565 WDR62O43379 1518 aa7.84□□□□□ -1.15
SDHCP2-201ENST00000398565 WDR97A6NE52 1622 aa7.84□□□□□ -1.15
SDHCP2-201ENST00000398565 NESP48681 1621 aa7.84□□□□□ -1.15
SDHCP2-201ENST00000398565 DNMBPQ6XZF7 1577 aa7.81□□□□□ -1.16
SDHCP2-201ENST00000398565 THOC2Q8NI27 1593 aaKnown RBP7.8□□□□□ -1.16
SDHCP2-201ENST00000398565 WRNQ14191 1432 aaPredicted RBP eCLIP7.78□□□□□ -1.16
SDHCP2-201ENST00000398565 IFT140Q96RY7 1462 aa7.78□□□□□ -1.16
SDHCP2-201ENST00000398565 TOPBP1Q92547 1522 aa7.78□□□□□ -1.16
SDHCP2-201ENST00000398565 KIF21AQ7Z4S6 1674 aa7.77□□□□□ -1.17
SDHCP2-201ENST00000398565 TOP2BQ02880 1626 aa7.77□□□□□ -1.17
SDHCP2-201ENST00000398565 URB2Q14146 1524 aaKnown RBP7.76□□□□□ -1.17
SDHCP2-201ENST00000398565 BIVM-ERCC5R4GMW8 1640 aa7.75□□□□□ -1.17
SDHCP2-201ENST00000398565 MSH5O43196 834 aa7.73□□□□□ -1.17
SDHCP2-201ENST00000398565 SOGA1O94964 1423 aa7.72□□□□□ -1.17
SDHCP2-201ENST00000398565 POLA1P09884 1462 aaPredicted RBP7.72□□□□□ -1.17
SDHCP2-201ENST00000398565 CUX1P39880 1505 aa7.72□□□□□ -1.17
SDHCP2-201ENST00000398565 ABCA10Q8WWZ4 1543 aa7.72□□□□□ -1.17
SDHCP2-201ENST00000398565 EEA1Q15075 1411 aa7.71□□□□□ -1.17
SDHCP2-201ENST00000398565 FGD5Q6ZNL6 1462 aa7.68□□□□□ -1.18
SDHCP2-201ENST00000398565 TARBP1Q13395 1621 aaKnown RBP7.68□□□□□ -1.18
SDHCP2-201ENST00000398565 TRIM41Q8WV44 630 aa7.68□□□□□ -1.18
SDHCP2-201ENST00000398565 KIF27Q86VH2 1401 aa7.67□□□□□ -1.18
SDHCP2-201ENST00000398565 ERICH3Q5RHP9 1530 aa7.67□□□□□ -1.18
SDHCP2-201ENST00000398565 SYNJ1O43426 1573 aa7.65□□□□□ -1.18
SDHCP2-201ENST00000398565 GRIN2BQ13224 1484 aa7.65□□□□□ -1.18
SDHCP2-201ENST00000398565 MAGI1Q96QZ7 1491 aaPredicted RBP7.65□□□□□ -1.18
SDHCP2-201ENST00000398565 GAPVD1Q14C86 1478 aa7.63□□□□□ -1.19
SDHCP2-201ENST00000398565 ABCA5Q8WWZ7 1642 aa7.61□□□□□ -1.19
SDHCP2-201ENST00000398565 FHAD1B1AJZ9 1412 aa7.6□□□□□ -1.19
SDHCP2-201ENST00000398565 SYNJ2O15056 1496 aa7.59□□□□□ -1.19
SDHCP2-201ENST00000398565 RAD54L2Q9Y4B4 1467 aa7.59□□□□□ -1.19
SDHCP2-201ENST00000398565 CUL7Q14999 1698 aa7.59□□□□□ -1.19
SDHCP2-201ENST00000398565 IGF1RP08069 1367 aa7.59□□□□□ -1.2
SDHCP2-201ENST00000398565 EIF4G3O43432 1585 aaKnown RBP7.58□□□□□ -1.2
SDHCP2-201ENST00000398565 TDRD9Q8NDG6 1382 aaKnown RBP7.57□□□□□ -1.2
SDHCP2-201ENST00000398565 ZNF608Q9ULD9 1512 aaPredicted RBP7.56□□□□□ -1.2
SDHCP2-201ENST00000398565 AQRO60306 1485 aaKnown RBP eCLIP7.55□□□□□ -1.2
SDHCP2-201ENST00000398565 OSCARQ8IYS5 282 aa7.55□□□□□ -1.2
SDHCP2-201ENST00000398565 CSRNP3Q8WYN3 585 aa7.55□□□□□ -1.2
SDHCP2-201ENST00000398565 CHMP7Q8WUX9 453 aaPredicted RBP7.54□□□□□ -1.2
SDHCP2-201ENST00000398565 CARMIL1Q5VZK9 1371 aa7.54□□□□□ -1.2
SDHCP2-201ENST00000398565 PRXQ9BXM0 1461 aa7.54□□□□□ -1.2
SDHCP2-201ENST00000398565 RAPGEF2Q9Y4G8 1499 aa7.53□□□□□ -1.2
SDHCP2-201ENST00000398565 PBRM1Q86U86 1689 aa7.52□□□□□ -1.21
SDHCP2-201ENST00000398565 NUP160Q12769 1436 aa7.52□□□□□ -1.21
SDHCP2-201ENST00000398565 ADAMTS12P58397 1594 aa7.51□□□□□ -1.21
SDHCP2-201ENST00000398565 GRIN2AQ12879 1464 aa7.51□□□□□ -1.21
SDHCP2-201ENST00000398565 SNAPC4Q5SXM2 1469 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms