RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 NISCHQ9Y2I1 1504 aa9.57□□□□□ -0.88
FNDC3A-202ENST00000398316 CCDC180Q9P1Z9 1646 aa8.86□□□□□ -0.99
FNDC3A-202ENST00000398316 MYO15BQ96JP2 1530 aa8.4□□□□□ -1.06
FNDC3A-202ENST00000398316 DCAF1Q9Y4B6 1507 aa8.35□□□□□ -1.07
FNDC3A-202ENST00000398316 ZCCHC6Q5VYS8 1495 aaKnown RBP8.12□□□□□ -1.11
FNDC3A-202ENST00000398316 NACADO15069 1562 aa8.05□□□□□ -1.12
FNDC3A-202ENST00000398316 SHROOM4Q9ULL8 1493 aa8.04□□□□□ -1.12
FNDC3A-202ENST00000398316 UNC13AQ9UPW8 1703 aa7.92□□□□□ -1.14
FNDC3A-202ENST00000398316 RB1CC1Q8TDY2 1594 aa7.88□□□□□ -1.15
FNDC3A-202ENST00000398316 BICRAQ9NZM4 1560 aa7.73□□□□□ -1.17
FNDC3A-202ENST00000398316 PEG3Q9GZU2 1588 aa7.68□□□□□ -1.18
FNDC3A-202ENST00000398316 ABCC9O60706 1549 aa7.61□□□□□ -1.19
FNDC3A-202ENST00000398316 SMARCA2P51531 1590 aa7.52□□□□□ -1.21
FNDC3A-202ENST00000398316 PRDM2Q13029 1718 aa7.47□□□□□ -1.21
FNDC3A-202ENST00000398316 HMGXB3Q12766 1538 aa7.46□□□□□ -1.22
FNDC3A-202ENST00000398316 SMARCA4P51532 1647 aa7.44□□□□□ -1.22
FNDC3A-202ENST00000398316 BAZ1AQ9NRL2 1556 aaPredicted RBP7.43□□□□□ -1.22
FNDC3A-202ENST00000398316 SCRIBQ14160 1630 aa7.43□□□□□ -1.22
FNDC3A-202ENST00000398316 EIF4G1Q04637 1599 aaKnown RBP7.37□□□□□ -1.23
FNDC3A-202ENST00000398316 NCAPD3P42695 1498 aa7.32□□□□□ -1.24
FNDC3A-202ENST00000398316 TOP2AP11388 1531 aaKnown RBP7.3□□□□□ -1.24
FNDC3A-202ENST00000398316 CC2D2AQ9P2K1 1620 aa7.22□□□□□ -1.25
FNDC3A-202ENST00000398316 MROH2BQ7Z745 1585 aa7.22□□□□□ -1.25
FNDC3A-202ENST00000398316 WDR97A6NE52 1622 aa7.21□□□□□ -1.26
FNDC3A-202ENST00000398316 ATAD2BQ9ULI0 1458 aa7.21□□□□□ -1.26
FNDC3A-202ENST00000398316 RSF1Q96T23 1441 aaPredicted RBP7.19□□□□□ -1.26
FNDC3A-202ENST00000398316 WIZO95785 1651 aa7.17□□□□□ -1.26
FNDC3A-202ENST00000398316 LAMC3Q9Y6N6 1575 aa7.16□□□□□ -1.26
FNDC3A-202ENST00000398316 CECR2Q9BXF3 1484 aa7.15□□□□□ -1.27
FNDC3A-202ENST00000398316 BIVM-ERCC5R4GMW8 1640 aa7.12□□□□□ -1.27
FNDC3A-202ENST00000398316 CFTRP13569 1480 aa7.06□□□□□ -1.28
FNDC3A-202ENST00000398316 THOC2Q8NI27 1593 aaKnown RBP7.04□□□□□ -1.28
FNDC3A-202ENST00000398316 BAZ1BQ9UIG0 1483 aaKnown RBP7.03□□□□□ -1.28
FNDC3A-202ENST00000398316 WDR62O43379 1518 aa7□□□□□ -1.29
FNDC3A-202ENST00000398316 TOP2BQ02880 1626 aa6.98□□□□□ -1.29
FNDC3A-202ENST00000398316 CCDC88BA6NC98 1476 aa6.97□□□□□ -1.29
FNDC3A-202ENST00000398316 ABCC8Q09428 1581 aa6.96□□□□□ -1.29
FNDC3A-202ENST00000398316 KIF21AQ7Z4S6 1674 aa6.96□□□□□ -1.29
FNDC3A-202ENST00000398316 DNMBPQ6XZF7 1577 aa6.94□□□□□ -1.3
FNDC3A-202ENST00000398316 TARBP1Q13395 1621 aaKnown RBP6.92□□□□□ -1.3
FNDC3A-202ENST00000398316 ABCA5Q8WWZ7 1642 aa6.91□□□□□ -1.3
FNDC3A-202ENST00000398316 CADPSQ9ULU8 1353 aa6.87□□□□□ -1.31
FNDC3A-202ENST00000398316 CUX2O14529 1486 aa6.87□□□□□ -1.31
FNDC3A-202ENST00000398316 CUL7Q14999 1698 aa6.84□□□□□ -1.31
FNDC3A-202ENST00000398316 PBRM1Q86U86 1689 aa6.83□□□□□ -1.32
FNDC3A-202ENST00000398316 MRC2Q9UBG0 1479 aa6.82□□□□□ -1.32
FNDC3A-202ENST00000398316 CUX1P39880 1505 aa6.82□□□□□ -1.32
FNDC3A-202ENST00000398316 SYNJ1O43426 1573 aa6.82□□□□□ -1.32
FNDC3A-202ENST00000398316 ABCA10Q8WWZ4 1543 aa6.82□□□□□ -1.32
FNDC3A-202ENST00000398316 ERICH3Q5RHP9 1530 aa6.81□□□□□ -1.32
FNDC3A-202ENST00000398316 KIF21BO75037 1637 aa6.8□□□□□ -1.32
FNDC3A-202ENST00000398316 PDS5BQ9NTI5 1447 aa6.79□□□□□ -1.32
FNDC3A-202ENST00000398316 URB2Q14146 1524 aaKnown RBP6.79□□□□□ -1.32
FNDC3A-202ENST00000398316 TOPBP1Q92547 1522 aa6.78□□□□□ -1.32
FNDC3A-202ENST00000398316 SHROOM2Q13796 1616 aa6.78□□□□□ -1.32
FNDC3A-202ENST00000398316 FANCD2Q9BXW9 1451 aa6.77□□□□□ -1.33
FNDC3A-202ENST00000398316 CEP164Q9UPV0 1460 aa6.77□□□□□ -1.33
FNDC3A-202ENST00000398316 EEA1Q15075 1411 aa6.76□□□□□ -1.33
FNDC3A-202ENST00000398316 PABPN1Q86U42 306 aaKnown RBP eCLIP6.76□□□□□ -1.33
FNDC3A-202ENST00000398316 IFT140Q96RY7 1462 aa6.74□□□□□ -1.33
FNDC3A-202ENST00000398316 ADAMTS12P58397 1594 aa6.73□□□□□ -1.33
FNDC3A-202ENST00000398316 CTTNBP2Q8WZ74 1663 aa6.73□□□□□ -1.33
FNDC3A-202ENST00000398316 EIF4G3O43432 1585 aaKnown RBP6.71□□□□□ -1.33
FNDC3A-202ENST00000398316 NESP48681 1621 aa6.7□□□□□ -1.34
FNDC3A-202ENST00000398316 POLA1P09884 1462 aaPredicted RBP6.7□□□□□ -1.34
FNDC3A-202ENST00000398316 CLASP1Q7Z460 1538 aa6.68□□□□□ -1.34
FNDC3A-202ENST00000398316 MAGI1Q96QZ7 1491 aaPredicted RBP6.68□□□□□ -1.34
FNDC3A-202ENST00000398316 SAMD9Q5K651 1589 aa6.68□□□□□ -1.34
FNDC3A-202ENST00000398316 DNAJC5BQ9UF47 199 aa6.67□□□□□ -1.34
FNDC3A-202ENST00000398316 WRNQ14191 1432 aaPredicted RBP eCLIP6.67□□□□□ -1.34
FNDC3A-202ENST00000398316 PRXQ9BXM0 1461 aa6.66□□□□□ -1.34
FNDC3A-202ENST00000398316 RUSC2Q8N2Y8 1516 aa6.65□□□□□ -1.35
FNDC3A-202ENST00000398316 FGD5Q6ZNL6 1462 aa6.65□□□□□ -1.35
FNDC3A-202ENST00000398316 DCAF8L2P0C7V8 631 aa6.63□□□□□ -1.35
FNDC3A-202ENST00000398316 CHD1O14646 1710 aa6.61□□□□□ -1.35
FNDC3A-202ENST00000398316 UGGT2Q9NYU1 1516 aa6.61□□□□□ -1.35
FNDC3A-202ENST00000398316 NUP160Q12769 1436 aa6.61□□□□□ -1.35
FNDC3A-202ENST00000398316 EFCAB5A4FU69 1503 aa6.6□□□□□ -1.35
FNDC3A-202ENST00000398316 MAP3K1Q13233 1512 aa6.58□□□□□ -1.36
FNDC3A-202ENST00000398316 GRIN2BQ13224 1484 aa6.58□□□□□ -1.36
FNDC3A-202ENST00000398316 SYNJ2O15056 1496 aa6.56□□□□□ -1.36
FNDC3A-202ENST00000398316 ADCY10Q96PN6 1610 aa6.55□□□□□ -1.36
FNDC3A-202ENST00000398316 AQRO60306 1485 aaKnown RBP eCLIP6.55□□□□□ -1.365e-6■■■■□ 23.2
FNDC3A-202ENST00000398316 CEP170Q5SW79 1584 aa6.55□□□□□ -1.36
FNDC3A-202ENST00000398316 CFAP43Q8NDM7 1665 aa6.55□□□□□ -1.36
FNDC3A-202ENST00000398316 FHAD1B1AJZ9 1412 aa6.54□□□□□ -1.36
FNDC3A-202ENST00000398316 GAPVD1Q14C86 1478 aa6.52□□□□□ -1.37
FNDC3A-202ENST00000398316 KIF27Q86VH2 1401 aa6.52□□□□□ -1.37
FNDC3A-202ENST00000398316 KDM5BQ9UGL1 1544 aa6.51□□□□□ -1.37
FNDC3A-202ENST00000398316 LRRIQ1Q96JM4 1722 aa6.51□□□□□ -1.37
FNDC3A-202ENST00000398316 UHRF1BP1LA0JNW5 1464 aa6.51□□□□□ -1.37
FNDC3A-202ENST00000398316 GRIN2AQ12879 1464 aa6.51□□□□□ -1.37
FNDC3A-202ENST00000398316 KIAA0556O60303 1618 aa6.5□□□□□ -1.37
FNDC3A-202ENST00000398316 SOGA1O94964 1423 aa6.49□□□□□ -1.37
FNDC3A-202ENST00000398316 IQGAP2Q13576 1575 aa6.49□□□□□ -1.37
FNDC3A-202ENST00000398316 RAPGEF2Q9Y4G8 1499 aa6.48□□□□□ -1.37
FNDC3A-202ENST00000398316 KIAA0586Q9BVV6 1533 aa6.48□□□□□ -1.37
FNDC3A-202ENST00000398316 IGF1RP08069 1367 aa6.48□□□□□ -1.37
FNDC3A-202ENST00000398316 ABCA8O94911 1581 aa6.48□□□□□ -1.37
FNDC3A-202ENST00000398316 ERCC6Q03468 1493 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms