RNA–Protein interactions for RNA: ENST00000397303.6

RBFOX2-203, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 5 BASIC

Gene RBFOX2, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-203ENST00000397303 NISCHQ9Y2I1 1504 aa27.46■■□□□ 1.99
RBFOX2-203ENST00000397303 AEBP2Q6ZN18 517 aaPredicted RBP26.46■■□□□ 1.83
RBFOX2-203ENST00000397303 CHIC1Q5VXU3 224 aa25.51■■□□□ 1.67
RBFOX2-203ENST00000397303 CCDC180Q9P1Z9 1646 aa24.22■■□□□ 1.47
RBFOX2-203ENST00000397303 ABCC9O60706 1549 aa23.49■■□□□ 1.35
RBFOX2-203ENST00000397303 ZCCHC6Q5VYS8 1495 aaKnown RBP22.93■■□□□ 1.26
RBFOX2-203ENST00000397303 DCAF8L2P0C7V8 631 aa22.89■■□□□ 1.26
RBFOX2-203ENST00000397303 NACADO15069 1562 aa22.76■■□□□ 1.23
RBFOX2-203ENST00000397303 MYO15BQ96JP2 1530 aa22.73■■□□□ 1.23
RBFOX2-203ENST00000397303 DCAF1Q9Y4B6 1507 aa22.73■■□□□ 1.23
RBFOX2-203ENST00000397303 RB1CC1Q8TDY2 1594 aa22.7■■□□□ 1.22
RBFOX2-203ENST00000397303 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
RBFOX2-203ENST00000397303 PHF23Q9BUL5 403 aaPredicted RBP22.34■■□□□ 1.17
RBFOX2-203ENST00000397303 SCRIBQ14160 1630 aa22.15■■□□□ 1.14
RBFOX2-203ENST00000397303 UNC13AQ9UPW8 1703 aa22.1■■□□□ 1.13
RBFOX2-203ENST00000397303 PABPN1Q86U42 306 aaKnown RBP eCLIP22.04■■□□□ 1.12
RBFOX2-203ENST00000397303 BICRAQ9NZM4 1560 aa21.99■■□□□ 1.11
RBFOX2-203ENST00000397303 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
RBFOX2-203ENST00000397303 EIF4G1Q04637 1599 aaKnown RBP21.39■■□□□ 1.02
RBFOX2-203ENST00000397303 CECR2Q9BXF3 1484 aa21.38■■□□□ 1.01
RBFOX2-203ENST00000397303 DNAJC5BQ9UF47 199 aa21.35■■□□□ 1.01
RBFOX2-203ENST00000397303 BAZ1AQ9NRL2 1556 aaPredicted RBP21.26■□□□□ 0.99
RBFOX2-203ENST00000397303 CC2D2AQ9P2K1 1620 aa21.24■□□□□ 0.99
RBFOX2-203ENST00000397303 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
RBFOX2-203ENST00000397303 MROH2BQ7Z745 1585 aa21.17■□□□□ 0.98
RBFOX2-203ENST00000397303 ATAD2BQ9ULI0 1458 aa21.07■□□□□ 0.96
RBFOX2-203ENST00000397303 RSF1Q96T23 1441 aaPredicted RBP21.06■□□□□ 0.96
RBFOX2-203ENST00000397303 SMARCA2P51531 1590 aa21.03■□□□□ 0.96
RBFOX2-203ENST00000397303 NCAPD3P42695 1498 aa21.02■□□□□ 0.96
RBFOX2-203ENST00000397303 PEG3Q9GZU2 1588 aa21.02■□□□□ 0.96
RBFOX2-203ENST00000397303 FOXD1Q16676 465 aa20.96■□□□□ 0.95
RBFOX2-203ENST00000397303 WIZO95785 1651 aa20.92■□□□□ 0.94
RBFOX2-203ENST00000397303 HMGXB3Q12766 1538 aa20.91■□□□□ 0.94
RBFOX2-203ENST00000397303 BAZ1BQ9UIG0 1483 aaKnown RBP20.9■□□□□ 0.94
RBFOX2-203ENST00000397303 SUPT5HO00267 1087 aaKnown RBP20.77■□□□□ 0.92
RBFOX2-203ENST00000397303 TOP2AP11388 1531 aaKnown RBP20.74■□□□□ 0.91
RBFOX2-203ENST00000397303 PLPPR3Q6T4P5 718 aa20.59■□□□□ 0.89
RBFOX2-203ENST00000397303 CCDC88BA6NC98 1476 aa20.53■□□□□ 0.88
RBFOX2-203ENST00000397303 CADPSQ9ULU8 1353 aa20.45■□□□□ 0.86
RBFOX2-203ENST00000397303 NESP48681 1621 aa20.4■□□□□ 0.86
RBFOX2-203ENST00000397303 LAMC3Q9Y6N6 1575 aa20.39■□□□□ 0.85
RBFOX2-203ENST00000397303 CFTRP13569 1480 aa20.37■□□□□ 0.85
RBFOX2-203ENST00000397303 PDS5BQ9NTI5 1447 aa20.29■□□□□ 0.84
RBFOX2-203ENST00000397303 ERCC6Q03468 1493 aa20.23■□□□□ 0.83
RBFOX2-203ENST00000397303 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
RBFOX2-203ENST00000397303 CEP164Q9UPV0 1460 aa20.12■□□□□ 0.81
RBFOX2-203ENST00000397303 KIF21AQ7Z4S6 1674 aa20.1■□□□□ 0.81
RBFOX2-203ENST00000397303 PRDM2Q13029 1718 aa20.1■□□□□ 0.81
RBFOX2-203ENST00000397303 MRC2Q9UBG0 1479 aa20.03■□□□□ 0.8
RBFOX2-203ENST00000397303 THOC2Q8NI27 1593 aaKnown RBP20■□□□□ 0.79
RBFOX2-203ENST00000397303 URB2Q14146 1524 aaKnown RBP19.96■□□□□ 0.79
RBFOX2-203ENST00000397303 WDR62O43379 1518 aa19.94■□□□□ 0.78
RBFOX2-203ENST00000397303 ABCC8Q09428 1581 aa19.91■□□□□ 0.78
RBFOX2-203ENST00000397303 CUX2O14529 1486 aa19.91■□□□□ 0.78
RBFOX2-203ENST00000397303 TOPBP1Q92547 1522 aa19.89■□□□□ 0.77
RBFOX2-203ENST00000397303 DNMBPQ6XZF7 1577 aa19.86■□□□□ 0.77
RBFOX2-203ENST00000397303 WRNQ14191 1432 aaPredicted RBP eCLIP19.85■□□□□ 0.77
RBFOX2-203ENST00000397303 CUX1P39880 1505 aa19.83■□□□□ 0.77
RBFOX2-203ENST00000397303 PPP6R1Q9UPN7 881 aa19.83■□□□□ 0.76
RBFOX2-203ENST00000397303 ADRA2BP18089 450 aa19.81■□□□□ 0.76
RBFOX2-203ENST00000397303 POLA1P09884 1462 aaPredicted RBP19.74■□□□□ 0.75
RBFOX2-203ENST00000397303 SYNJ1O43426 1573 aa19.73■□□□□ 0.75
RBFOX2-203ENST00000397303 FGD5Q6ZNL6 1462 aa19.73■□□□□ 0.75
RBFOX2-203ENST00000397303 TOP2BQ02880 1626 aa19.72■□□□□ 0.75
RBFOX2-203ENST00000397303 PIAS4Q8N2W9 510 aaPredicted RBP19.71■□□□□ 0.75
RBFOX2-203ENST00000397303 BIVM-ERCC5R4GMW8 1640 aa19.7■□□□□ 0.74
RBFOX2-203ENST00000397303 IFT140Q96RY7 1462 aa19.7■□□□□ 0.74
RBFOX2-203ENST00000397303 SOGA1O94964 1423 aa19.7■□□□□ 0.74
RBFOX2-203ENST00000397303 RAD54L2Q9Y4B4 1467 aa19.66■□□□□ 0.74
RBFOX2-203ENST00000397303 TRIM41Q8WV44 630 aa19.61■□□□□ 0.73
RBFOX2-203ENST00000397303 TARBP1Q13395 1621 aaKnown RBP19.61■□□□□ 0.73
RBFOX2-203ENST00000397303 ZNF608Q9ULD9 1512 aaPredicted RBP19.58■□□□□ 0.72
RBFOX2-203ENST00000397303 ABCA10Q8WWZ4 1543 aa19.57■□□□□ 0.72
RBFOX2-203ENST00000397303 MSH5O43196 834 aa19.56■□□□□ 0.72
RBFOX2-203ENST00000397303 TDRD9Q8NDG6 1382 aaKnown RBP19.54■□□□□ 0.72
RBFOX2-203ENST00000397303 AQRO60306 1485 aaKnown RBP eCLIP19.53■□□□□ 0.72
RBFOX2-203ENST00000397303 WDR97A6NE52 1622 aa19.48■□□□□ 0.71
RBFOX2-203ENST00000397303 EIF4G3O43432 1585 aaKnown RBP19.47■□□□□ 0.71
RBFOX2-203ENST00000397303 GAPVD1Q14C86 1478 aa19.45■□□□□ 0.7
RBFOX2-203ENST00000397303 ABCA5Q8WWZ7 1642 aa19.42■□□□□ 0.7
RBFOX2-203ENST00000397303 KIF27Q86VH2 1401 aa19.41■□□□□ 0.7
RBFOX2-203ENST00000397303 GRIN2BQ13224 1484 aa19.41■□□□□ 0.7
RBFOX2-203ENST00000397303 SNAPC4Q5SXM2 1469 aa19.33■□□□□ 0.69
RBFOX2-203ENST00000397303 ERICH3Q5RHP9 1530 aa19.33■□□□□ 0.68
RBFOX2-203ENST00000397303 IGF1RP08069 1367 aa19.32■□□□□ 0.68
RBFOX2-203ENST00000397303 MAGI1Q96QZ7 1491 aaPredicted RBP19.32■□□□□ 0.68
RBFOX2-203ENST00000397303 RUSC2Q8N2Y8 1516 aa19.31■□□□□ 0.68
RBFOX2-203ENST00000397303 PBRM1Q86U86 1689 aa19.3■□□□□ 0.68
RBFOX2-203ENST00000397303 FBLN2P98095 1184 aa19.26■□□□□ 0.67
RBFOX2-203ENST00000397303 CHMP7Q8WUX9 453 aaPredicted RBP19.26■□□□□ 0.67
RBFOX2-203ENST00000397303 FHAD1B1AJZ9 1412 aa19.25■□□□□ 0.67
RBFOX2-203ENST00000397303 SYNJ2O15056 1496 aa19.24■□□□□ 0.67
RBFOX2-203ENST00000397303 EEA1Q15075 1411 aa19.23■□□□□ 0.67
RBFOX2-203ENST00000397303 CARMIL1Q5VZK9 1371 aa19.21■□□□□ 0.67
RBFOX2-203ENST00000397303 ADAMTS12P58397 1594 aa19.2■□□□□ 0.66
RBFOX2-203ENST00000397303 OSCARQ8IYS5 282 aa19.19■□□□□ 0.66
RBFOX2-203ENST00000397303 CSRNP3Q8WYN3 585 aa19.19■□□□□ 0.66
RBFOX2-203ENST00000397303 FAM9AQ8IZU1 332 aaPredicted RBP19.19■□□□□ 0.66
RBFOX2-203ENST00000397303 CUL7Q14999 1698 aa19.16■□□□□ 0.66
RBFOX2-203ENST00000397303 GRIN2AQ12879 1464 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms