RNA–Protein interactions for RNA: ENST00000396999.2

PPARG-203, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

TSL 1 (best)

Gene PPARG, Length 1,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-203ENST00000396999 NISCHQ9Y2I1 1504 aa27.47■■□□□ 1.99
PPARG-203ENST00000396999 AEBP2Q6ZN18 517 aaPredicted RBP25.69■■□□□ 1.7
PPARG-203ENST00000396999 CCDC180Q9P1Z9 1646 aa24.2■■□□□ 1.46
PPARG-203ENST00000396999 CHIC1Q5VXU3 224 aa24.19■■□□□ 1.46
PPARG-203ENST00000396999 ABCC9O60706 1549 aa23.09■■□□□ 1.29
PPARG-203ENST00000396999 ZCCHC6Q5VYS8 1495 aaKnown RBP23.02■■□□□ 1.28
PPARG-203ENST00000396999 DCAF1Q9Y4B6 1507 aa22.77■■□□□ 1.24
PPARG-203ENST00000396999 DCAF8L2P0C7V8 631 aa22.67■■□□□ 1.22
PPARG-203ENST00000396999 MYO15BQ96JP2 1530 aa22.65■■□□□ 1.22
PPARG-203ENST00000396999 NACADO15069 1562 aa22.6■■□□□ 1.21
PPARG-203ENST00000396999 RB1CC1Q8TDY2 1594 aa22.49■■□□□ 1.19
PPARG-203ENST00000396999 SCRIBQ14160 1630 aa22.12■■□□□ 1.13
PPARG-203ENST00000396999 SHROOM4Q9ULL8 1493 aa22.04■■□□□ 1.12
PPARG-203ENST00000396999 UNC13AQ9UPW8 1703 aa21.99■■□□□ 1.11
PPARG-203ENST00000396999 SENP3Q9H4L4 574 aaPredicted RBP21.99■■□□□ 1.11
PPARG-203ENST00000396999 BICRAQ9NZM4 1560 aa21.77■■□□□ 1.08
PPARG-203ENST00000396999 PABPN1Q86U42 306 aaKnown RBP eCLIP21.64■■□□□ 1.05
PPARG-203ENST00000396999 PHF23Q9BUL5 403 aaPredicted RBP21.62■■□□□ 1.05
PPARG-203ENST00000396999 CECR2Q9BXF3 1484 aa21.32■■□□□ 1
PPARG-203ENST00000396999 BAZ1AQ9NRL2 1556 aaPredicted RBP21.27■■□□□ 1
PPARG-203ENST00000396999 SMARCA4P51532 1647 aa21.21■□□□□ 0.99
PPARG-203ENST00000396999 MROH2BQ7Z745 1585 aa21.18■□□□□ 0.98
PPARG-203ENST00000396999 EIF4G1Q04637 1599 aaKnown RBP21.16■□□□□ 0.98
PPARG-203ENST00000396999 RSF1Q96T23 1441 aaPredicted RBP21.14■□□□□ 0.97
PPARG-203ENST00000396999 SUPT5HO00267 1087 aaKnown RBP21.02■□□□□ 0.95
PPARG-203ENST00000396999 PEG3Q9GZU2 1588 aa20.99■□□□□ 0.95
PPARG-203ENST00000396999 WIZO95785 1651 aa20.99■□□□□ 0.95
PPARG-203ENST00000396999 SMARCA2P51531 1590 aa20.95■□□□□ 0.95
PPARG-203ENST00000396999 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
PPARG-203ENST00000396999 ATAD2BQ9ULI0 1458 aa20.93■□□□□ 0.94
PPARG-203ENST00000396999 NCAPD3P42695 1498 aa20.82■□□□□ 0.92
PPARG-203ENST00000396999 TOP2AP11388 1531 aaKnown RBP20.81■□□□□ 0.92
PPARG-203ENST00000396999 HMGXB3Q12766 1538 aa20.8■□□□□ 0.92
PPARG-203ENST00000396999 BAZ1BQ9UIG0 1483 aaKnown RBP20.8■□□□□ 0.92
PPARG-203ENST00000396999 DNAJC5BQ9UF47 199 aa20.62■□□□□ 0.89
PPARG-203ENST00000396999 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
PPARG-203ENST00000396999 FOXD1Q16676 465 aa20.48■□□□□ 0.87
PPARG-203ENST00000396999 CFTRP13569 1480 aa20.26■□□□□ 0.83
PPARG-203ENST00000396999 CADPSQ9ULU8 1353 aa20.25■□□□□ 0.83
PPARG-203ENST00000396999 LAMC3Q9Y6N6 1575 aa20.21■□□□□ 0.83
PPARG-203ENST00000396999 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
PPARG-203ENST00000396999 NESP48681 1621 aa20.15■□□□□ 0.82
PPARG-203ENST00000396999 PDS5BQ9NTI5 1447 aa20.03■□□□□ 0.8
PPARG-203ENST00000396999 FANCD2Q9BXW9 1451 aa20.03■□□□□ 0.8
PPARG-203ENST00000396999 ABCC8Q09428 1581 aa19.98■□□□□ 0.79
PPARG-203ENST00000396999 CEP164Q9UPV0 1460 aa19.96■□□□□ 0.79
PPARG-203ENST00000396999 KIF21AQ7Z4S6 1674 aa19.96■□□□□ 0.79
PPARG-203ENST00000396999 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
PPARG-203ENST00000396999 ERCC6Q03468 1493 aa19.87■□□□□ 0.77
PPARG-203ENST00000396999 SYNJ1O43426 1573 aa19.86■□□□□ 0.77
PPARG-203ENST00000396999 CUX1P39880 1505 aa19.84■□□□□ 0.77
PPARG-203ENST00000396999 TOP2BQ02880 1626 aa19.83■□□□□ 0.77
PPARG-203ENST00000396999 BIVM-ERCC5R4GMW8 1640 aa19.83■□□□□ 0.77
PPARG-203ENST00000396999 TRIM41Q8WV44 630 aa19.82■□□□□ 0.76
PPARG-203ENST00000396999 DNMBPQ6XZF7 1577 aa19.82■□□□□ 0.76
PPARG-203ENST00000396999 MRC2Q9UBG0 1479 aa19.8■□□□□ 0.76
PPARG-203ENST00000396999 URB2Q14146 1524 aaKnown RBP19.79■□□□□ 0.76
PPARG-203ENST00000396999 TOPBP1Q92547 1522 aa19.78■□□□□ 0.76
PPARG-203ENST00000396999 THOC2Q8NI27 1593 aaKnown RBP19.75■□□□□ 0.75
PPARG-203ENST00000396999 WDR62O43379 1518 aa19.73■□□□□ 0.75
PPARG-203ENST00000396999 FGD5Q6ZNL6 1462 aa19.69■□□□□ 0.74
PPARG-203ENST00000396999 POLA1P09884 1462 aaPredicted RBP19.65■□□□□ 0.74
PPARG-203ENST00000396999 POTEDQ86YR6 584 aa19.59■□□□□ 0.73
PPARG-203ENST00000396999 SOGA1O94964 1423 aa19.55■□□□□ 0.72
PPARG-203ENST00000396999 CUX2O14529 1486 aa19.54■□□□□ 0.72
PPARG-203ENST00000396999 RAD54L2Q9Y4B4 1467 aa19.54■□□□□ 0.72
PPARG-203ENST00000396999 ABCA10Q8WWZ4 1543 aa19.53■□□□□ 0.72
PPARG-203ENST00000396999 WDR97A6NE52 1622 aa19.52■□□□□ 0.72
PPARG-203ENST00000396999 TARBP1Q13395 1621 aaKnown RBP19.52■□□□□ 0.72
PPARG-203ENST00000396999 IFT140Q96RY7 1462 aa19.51■□□□□ 0.71
PPARG-203ENST00000396999 EEA1Q15075 1411 aa19.48■□□□□ 0.71
PPARG-203ENST00000396999 KIF27Q86VH2 1401 aa19.47■□□□□ 0.71
PPARG-203ENST00000396999 RUSC2Q8N2Y8 1516 aa19.45■□□□□ 0.7
PPARG-203ENST00000396999 ABCA5Q8WWZ7 1642 aa19.41■□□□□ 0.7
PPARG-203ENST00000396999 FAM9AQ8IZU1 332 aaPredicted RBP19.4■□□□□ 0.7
PPARG-203ENST00000396999 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
PPARG-203ENST00000396999 ZNF608Q9ULD9 1512 aaPredicted RBP19.36■□□□□ 0.69
PPARG-203ENST00000396999 GAPVD1Q14C86 1478 aa19.36■□□□□ 0.69
PPARG-203ENST00000396999 EIF4G3O43432 1585 aaKnown RBP19.35■□□□□ 0.69
PPARG-203ENST00000396999 CSRNP3Q8WYN3 585 aa19.33■□□□□ 0.69
PPARG-203ENST00000396999 AQRO60306 1485 aaKnown RBP eCLIP19.31■□□□□ 0.68
PPARG-203ENST00000396999 MSH5O43196 834 aa19.31■□□□□ 0.68
PPARG-203ENST00000396999 ERICH3Q5RHP9 1530 aa19.31■□□□□ 0.68
PPARG-203ENST00000396999 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
PPARG-203ENST00000396999 IGF1RP08069 1367 aa19.29■□□□□ 0.68
PPARG-203ENST00000396999 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
PPARG-203ENST00000396999 CUL7Q14999 1698 aa19.26■□□□□ 0.67
PPARG-203ENST00000396999 KIF21BO75037 1637 aa19.25■□□□□ 0.67
PPARG-203ENST00000396999 PRXQ9BXM0 1461 aa19.24■□□□□ 0.67
PPARG-203ENST00000396999 PLPPR3Q6T4P5 718 aa19.23■□□□□ 0.67
PPARG-203ENST00000396999 CARMIL1Q5VZK9 1371 aa19.19■□□□□ 0.66
PPARG-203ENST00000396999 ADAMTS12P58397 1594 aa19.19■□□□□ 0.66
PPARG-203ENST00000396999 GOLGA3Q08378 1498 aa19.18■□□□□ 0.66
PPARG-203ENST00000396999 SNAPC4Q5SXM2 1469 aa19.18■□□□□ 0.66
PPARG-203ENST00000396999 MAGI1Q96QZ7 1491 aaPredicted RBP19.17■□□□□ 0.66
PPARG-203ENST00000396999 RAPGEF2Q9Y4G8 1499 aa19.16■□□□□ 0.66
PPARG-203ENST00000396999 FHAD1B1AJZ9 1412 aa19.16■□□□□ 0.66
PPARG-203ENST00000396999 LOC105371045A0A1W2PR82 267 aa19.11■□□□□ 0.65
PPARG-203ENST00000396999 EHMT2Q96KQ7 1210 aa19.1■□□□□ 0.65
PPARG-203ENST00000396999 SYNJ2O15056 1496 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms