RNA–Protein interactions for RNA: ENST00000396722.2

IFI35-202, Transcript of interferon induced protein 35, humanhuman

TSL 2

Gene IFI35, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFI35-202ENST00000396722 NISCHQ9Y2I1 1504 aa26.77■■□□□ 1.88
IFI35-202ENST00000396722 ABCC9O60706 1549 aa24■■□□□ 1.43
IFI35-202ENST00000396722 CCDC180Q9P1Z9 1646 aa23.77■■□□□ 1.4
IFI35-202ENST00000396722 DNAJC5BQ9UF47 199 aa23.63■■□□□ 1.37
IFI35-202ENST00000396722 DNAJC5Q9H3Z4 198 aa22.58■■□□□ 1.21
IFI35-202ENST00000396722 ZCCHC6Q5VYS8 1495 aaKnown RBP22.37■■□□□ 1.17
IFI35-202ENST00000396722 RB1CC1Q8TDY2 1594 aa22.28■■□□□ 1.16
IFI35-202ENST00000396722 PABPN1Q86U42 306 aaKnown RBP eCLIP22.22■■□□□ 1.15
IFI35-202ENST00000396722 NACADO15069 1562 aa22.21■■□□□ 1.15
IFI35-202ENST00000396722 DCAF8L2P0C7V8 631 aa22.2■■□□□ 1.14
IFI35-202ENST00000396722 DCAF1Q9Y4B6 1507 aa22.15■■□□□ 1.14
IFI35-202ENST00000396722 MYO15BQ96JP2 1530 aa22.13■■□□□ 1.13
IFI35-202ENST00000396722 UNC13AQ9UPW8 1703 aa21.84■■□□□ 1.09
IFI35-202ENST00000396722 CECR2Q9BXF3 1484 aa21.76■■□□□ 1.07
IFI35-202ENST00000396722 SCRIBQ14160 1630 aa21.7■■□□□ 1.06
IFI35-202ENST00000396722 BICRAQ9NZM4 1560 aa21.68■■□□□ 1.06
IFI35-202ENST00000396722 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.04
IFI35-202ENST00000396722 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
IFI35-202ENST00000396722 AEBP2Q6ZN18 517 aaPredicted RBP21.27■■□□□ 1
IFI35-202ENST00000396722 EIF4G1Q04637 1599 aaKnown RBP21.26■□□□□ 0.99
IFI35-202ENST00000396722 CUX2O14529 1486 aa21.16■□□□□ 0.98
IFI35-202ENST00000396722 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
IFI35-202ENST00000396722 CHIC1Q5VXU3 224 aa21.03■□□□□ 0.96
IFI35-202ENST00000396722 ERCC6Q03468 1493 aa20.81■□□□□ 0.92
IFI35-202ENST00000396722 SMARCA4P51532 1647 aa20.77■□□□□ 0.92
IFI35-202ENST00000396722 BAZ1AQ9NRL2 1556 aaPredicted RBP20.74■□□□□ 0.91
IFI35-202ENST00000396722 MROH2BQ7Z745 1585 aa20.65■□□□□ 0.9
IFI35-202ENST00000396722 SUPT5HO00267 1087 aaKnown RBP20.54■□□□□ 0.88
IFI35-202ENST00000396722 SMARCA2P51531 1590 aa20.53■□□□□ 0.88
IFI35-202ENST00000396722 PEG3Q9GZU2 1588 aa20.53■□□□□ 0.88
IFI35-202ENST00000396722 ATAD2BQ9ULI0 1458 aa20.52■□□□□ 0.88
IFI35-202ENST00000396722 WIZO95785 1651 aa20.51■□□□□ 0.87
IFI35-202ENST00000396722 RSF1Q96T23 1441 aaPredicted RBP20.47■□□□□ 0.87
IFI35-202ENST00000396722 NCAPD3P42695 1498 aa20.44■□□□□ 0.86
IFI35-202ENST00000396722 HMGXB3Q12766 1538 aa20.43■□□□□ 0.86
IFI35-202ENST00000396722 BAZ1BQ9UIG0 1483 aaKnown RBP20.38■□□□□ 0.85
IFI35-202ENST00000396722 NESP48681 1621 aa20.27■□□□□ 0.84
IFI35-202ENST00000396722 TOP2AP11388 1531 aaKnown RBP20.25■□□□□ 0.83
IFI35-202ENST00000396722 THOC2Q8NI27 1593 aaKnown RBP20.24■□□□□ 0.83
IFI35-202ENST00000396722 OSCARQ8IYS5 282 aa20.08■□□□□ 0.81
IFI35-202ENST00000396722 CCDC88BA6NC98 1476 aa19.99■□□□□ 0.79
IFI35-202ENST00000396722 LAMC3Q9Y6N6 1575 aa19.93■□□□□ 0.78
IFI35-202ENST00000396722 PDS5BQ9NTI5 1447 aa19.91■□□□□ 0.78
IFI35-202ENST00000396722 KIF21AQ7Z4S6 1674 aa19.88■□□□□ 0.77
IFI35-202ENST00000396722 PRDM2Q13029 1718 aa19.88■□□□□ 0.77
IFI35-202ENST00000396722 CADPSQ9ULU8 1353 aa19.85■□□□□ 0.77
IFI35-202ENST00000396722 TRHP20396 242 aaPredicted RBP19.85■□□□□ 0.77
IFI35-202ENST00000396722 RIMBP3CA6NJZ7 1639 aa19.83■□□□□ 0.76
IFI35-202ENST00000396722 RIMBP3BA6NNM3 1639 aa19.83■□□□□ 0.76
IFI35-202ENST00000396722 RIMBP3Q9UFD9 1639 aa19.83■□□□□ 0.76
IFI35-202ENST00000396722 CFTRP13569 1480 aa19.82■□□□□ 0.76
IFI35-202ENST00000396722 MRC2Q9UBG0 1479 aa19.76■□□□□ 0.75
IFI35-202ENST00000396722 WDR62O43379 1518 aa19.73■□□□□ 0.75
IFI35-202ENST00000396722 CYB5RLQ6IPT4 315 aa19.7■□□□□ 0.74
IFI35-202ENST00000396722 ARHGEF11O15085 1522 aa19.68■□□□□ 0.74
IFI35-202ENST00000396722 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
IFI35-202ENST00000396722 CEP164Q9UPV0 1460 aa19.63■□□□□ 0.73
IFI35-202ENST00000396722 ILDR1Q86SU0 546 aaPredicted RBP19.51■□□□□ 0.71
IFI35-202ENST00000396722 URB2Q14146 1524 aaKnown RBP19.48■□□□□ 0.71
IFI35-202ENST00000396722 DNMBPQ6XZF7 1577 aa19.43■□□□□ 0.7
IFI35-202ENST00000396722 ARAP1Q96P48 1450 aa19.41■□□□□ 0.7
IFI35-202ENST00000396722 TOPBP1Q92547 1522 aa19.4■□□□□ 0.7
IFI35-202ENST00000396722 ABCC8Q09428 1581 aa19.4■□□□□ 0.7
IFI35-202ENST00000396722 CUX1P39880 1505 aa19.37■□□□□ 0.69
IFI35-202ENST00000396722 BIVM-ERCC5R4GMW8 1640 aa19.32■□□□□ 0.68
IFI35-202ENST00000396722 SYNJ1O43426 1573 aa19.32■□□□□ 0.68
IFI35-202ENST00000396722 WRNQ14191 1432 aaPredicted RBP eCLIP19.3■□□□□ 0.68
IFI35-202ENST00000396722 TOP2BQ02880 1626 aa19.29■□□□□ 0.68
IFI35-202ENST00000396722 POLA1P09884 1462 aaPredicted RBP19.25■□□□□ 0.67
IFI35-202ENST00000396722 FGD5Q6ZNL6 1462 aa19.25■□□□□ 0.67
IFI35-202ENST00000396722 ZNF608Q9ULD9 1512 aaPredicted RBP19.21■□□□□ 0.67
IFI35-202ENST00000396722 TARBP1Q13395 1621 aaKnown RBP19.21■□□□□ 0.67
IFI35-202ENST00000396722 IFT140Q96RY7 1462 aa19.18■□□□□ 0.66
IFI35-202ENST00000396722 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
IFI35-202ENST00000396722 RAD54L2Q9Y4B4 1467 aa19.16■□□□□ 0.66
IFI35-202ENST00000396722 SOGA1O94964 1423 aa19.14■□□□□ 0.65
IFI35-202ENST00000396722 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
IFI35-202ENST00000396722 EEA1Q15075 1411 aa19.08■□□□□ 0.65
IFI35-202ENST00000396722 FBLN2P98095 1184 aa19.06■□□□□ 0.64
IFI35-202ENST00000396722 ABCA10Q8WWZ4 1543 aa19.05■□□□□ 0.64
IFI35-202ENST00000396722 PBRM1Q86U86 1689 aa19.02■□□□□ 0.64
IFI35-202ENST00000396722 ABCA5Q8WWZ7 1642 aa19.02■□□□□ 0.64
IFI35-202ENST00000396722 CHD1O14646 1710 aa19.02■□□□□ 0.63
IFI35-202ENST00000396722 AQRO60306 1485 aaKnown RBP eCLIP19.01■□□□□ 0.63
IFI35-202ENST00000396722 TDRD9Q8NDG6 1382 aaKnown RBP19■□□□□ 0.63
IFI35-202ENST00000396722 GAPVD1Q14C86 1478 aa18.95■□□□□ 0.62
IFI35-202ENST00000396722 FAM9AQ8IZU1 332 aaPredicted RBP18.91■□□□□ 0.62
IFI35-202ENST00000396722 LOC105371045A0A1W2PR82 267 aa18.9■□□□□ 0.62
IFI35-202ENST00000396722 GRIN2BQ13224 1484 aa18.9■□□□□ 0.62
IFI35-202ENST00000396722 KDM4FA0A1W2PPD8 638 aa18.87■□□□□ 0.61
IFI35-202ENST00000396722 SNAPC4Q5SXM2 1469 aa18.86■□□□□ 0.61
IFI35-202ENST00000396722 KIF27Q86VH2 1401 aa18.86■□□□□ 0.61
IFI35-202ENST00000396722 CSRNP3Q8WYN3 585 aa18.85■□□□□ 0.61
IFI35-202ENST00000396722 ERICH3Q5RHP9 1530 aa18.84■□□□□ 0.61
IFI35-202ENST00000396722 CLASP1Q7Z460 1538 aa18.84■□□□□ 0.61
IFI35-202ENST00000396722 MAGI1Q96QZ7 1491 aaPredicted RBP18.83■□□□□ 0.6
IFI35-202ENST00000396722 RUSC2Q8N2Y8 1516 aa18.82■□□□□ 0.6
IFI35-202ENST00000396722 ADAMTS12P58397 1594 aa18.81■□□□□ 0.6
IFI35-202ENST00000396722 CUL7Q14999 1698 aa18.78■□□□□ 0.6
IFI35-202ENST00000396722 KIF21BO75037 1637 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms