RNA–Protein interactions for RNA: ENST00000395466.6

SNCAIP-204, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-204ENST00000395466 NISCHQ9Y2I1 1504 aa30.02■■■□□ 2.4
SNCAIP-204ENST00000395466 CCDC180Q9P1Z9 1646 aa25.84■■□□□ 1.73
SNCAIP-204ENST00000395466 ZCCHC6Q5VYS8 1495 aaKnown RBP25.36■■□□□ 1.65
SNCAIP-204ENST00000395466 SHROOM4Q9ULL8 1493 aa25.02■■□□□ 1.6
SNCAIP-204ENST00000395466 DCAF1Q9Y4B6 1507 aa24.77■■□□□ 1.56
SNCAIP-204ENST00000395466 DCAF8L2P0C7V8 631 aa24.59■■□□□ 1.53
SNCAIP-204ENST00000395466 SUPT5HO00267 1087 aaKnown RBP24.34■■□□□ 1.49
SNCAIP-204ENST00000395466 MYO15BQ96JP2 1530 aa24.21■■□□□ 1.47
SNCAIP-204ENST00000395466 ABCC9O60706 1549 aa23.94■■□□□ 1.42
SNCAIP-204ENST00000395466 SCRIBQ14160 1630 aa23.93■■□□□ 1.42
SNCAIP-204ENST00000395466 NACADO15069 1562 aa23.9■■□□□ 1.42
SNCAIP-204ENST00000395466 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
SNCAIP-204ENST00000395466 RSF1Q96T23 1441 aaPredicted RBP23.56■■□□□ 1.36
SNCAIP-204ENST00000395466 RB1CC1Q8TDY2 1594 aa23.54■■□□□ 1.36
SNCAIP-204ENST00000395466 CECR2Q9BXF3 1484 aa23.35■■□□□ 1.33
SNCAIP-204ENST00000395466 MROH2BQ7Z745 1585 aa23.27■■□□□ 1.32
SNCAIP-204ENST00000395466 UNC13AQ9UPW8 1703 aa23.26■■□□□ 1.31
SNCAIP-204ENST00000395466 WIZO95785 1651 aa23.14■■□□□ 1.29
SNCAIP-204ENST00000395466 BAZ1AQ9NRL2 1556 aaPredicted RBP23.09■■□□□ 1.29
SNCAIP-204ENST00000395466 SMARCA4P51532 1647 aa22.96■■□□□ 1.27
SNCAIP-204ENST00000395466 BICRAQ9NZM4 1560 aa22.94■■□□□ 1.26
SNCAIP-204ENST00000395466 TOP2AP11388 1531 aaKnown RBP22.83■■□□□ 1.25
SNCAIP-204ENST00000395466 LOC105371045A0A1W2PR82 267 aa22.81■■□□□ 1.24
SNCAIP-204ENST00000395466 EIF4G1Q04637 1599 aaKnown RBP22.8■■□□□ 1.24
SNCAIP-204ENST00000395466 TRIM41Q8WV44 630 aa22.78■■□□□ 1.24
SNCAIP-204ENST00000395466 PABPN1Q86U42 306 aaKnown RBP eCLIP22.73■■□□□ 1.23
SNCAIP-204ENST00000395466 SMARCA2P51531 1590 aa22.68■■□□□ 1.22
SNCAIP-204ENST00000395466 CCDC88BA6NC98 1476 aa22.65■■□□□ 1.22
SNCAIP-204ENST00000395466 PEG3Q9GZU2 1588 aa22.62■■□□□ 1.21
SNCAIP-204ENST00000395466 FAM9AQ8IZU1 332 aaPredicted RBP22.46■■□□□ 1.19
SNCAIP-204ENST00000395466 ABCC8Q09428 1581 aa22.42■■□□□ 1.18
SNCAIP-204ENST00000395466 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
SNCAIP-204ENST00000395466 PCGF6Q9BYE7 350 aa22.4■■□□□ 1.18
SNCAIP-204ENST00000395466 BAZ1BQ9UIG0 1483 aaKnown RBP22.29■■□□□ 1.16
SNCAIP-204ENST00000395466 HRCP23327 699 aa22.28■■□□□ 1.16
SNCAIP-204ENST00000395466 TRIM26Q12899 539 aaPredicted RBP22.18■■□□□ 1.14
SNCAIP-204ENST00000395466 EHMT2Q96KQ7 1210 aa22.15■■□□□ 1.14
SNCAIP-204ENST00000395466 SOGA1O94964 1423 aa22.12■■□□□ 1.13
SNCAIP-204ENST00000395466 WRNQ14191 1432 aaPredicted RBP eCLIP22.12■■□□□ 1.13
SNCAIP-204ENST00000395466 HMGXB3Q12766 1538 aa22.1■■□□□ 1.13
SNCAIP-204ENST00000395466 NCAPD3P42695 1498 aa22.08■■□□□ 1.13
SNCAIP-204ENST00000395466 EEA1Q15075 1411 aa22.07■■□□□ 1.12
SNCAIP-204ENST00000395466 SYNJ1O43426 1573 aa22.07■■□□□ 1.12
SNCAIP-204ENST00000395466 RUSC2Q8N2Y8 1516 aa22.04■■□□□ 1.12
SNCAIP-204ENST00000395466 CSRNP3Q8WYN3 585 aa21.95■■□□□ 1.1
SNCAIP-204ENST00000395466 TNIKQ9UKE5 1360 aa21.91■■□□□ 1.1
SNCAIP-204ENST00000395466 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
SNCAIP-204ENST00000395466 CEP162Q5TB80 1403 aa21.87■■□□□ 1.09
SNCAIP-204ENST00000395466 BIVM-ERCC5R4GMW8 1640 aa21.86■■□□□ 1.09
SNCAIP-204ENST00000395466 GOLGA3Q08378 1498 aa21.85■■□□□ 1.09
SNCAIP-204ENST00000395466 KIF21BO75037 1637 aa21.83■■□□□ 1.08
SNCAIP-204ENST00000395466 CFTRP13569 1480 aa21.78■■□□□ 1.08
SNCAIP-204ENST00000395466 CEP164Q9UPV0 1460 aa21.77■■□□□ 1.08
SNCAIP-204ENST00000395466 PPARGC1BQ86YN6 1023 aaKnown RBP21.75■■□□□ 1.07
SNCAIP-204ENST00000395466 PRDM2Q13029 1718 aa21.74■■□□□ 1.07
SNCAIP-204ENST00000395466 UBTFP17480 764 aaKnown RBP21.72■■□□□ 1.07
SNCAIP-204ENST00000395466 CUX1P39880 1505 aa21.71■■□□□ 1.07
SNCAIP-204ENST00000395466 CC2D2AQ9P2K1 1620 aa21.68■■□□□ 1.06
SNCAIP-204ENST00000395466 RAPGEF2Q9Y4G8 1499 aa21.63■■□□□ 1.05
SNCAIP-204ENST00000395466 CADPSQ9ULU8 1353 aa21.56■■□□□ 1.04
SNCAIP-204ENST00000395466 ZEB1P37275 1124 aaPredicted RBP21.56■■□□□ 1.04
SNCAIP-204ENST00000395466 PRXQ9BXM0 1461 aa21.54■■□□□ 1.04
SNCAIP-204ENST00000395466 ERICH3Q5RHP9 1530 aa21.54■■□□□ 1.04
SNCAIP-204ENST00000395466 CLIP1P30622 1438 aa21.53■■□□□ 1.04
SNCAIP-204ENST00000395466 KIF27Q86VH2 1401 aa21.47■■□□□ 1.03
SNCAIP-204ENST00000395466 VPS8Q8N3P4 1428 aa21.44■■□□□ 1.02
SNCAIP-204ENST00000395466 TTBK1Q5TCY1 1321 aaPredicted RBP21.38■■□□□ 1.01
SNCAIP-204ENST00000395466 FGD5Q6ZNL6 1462 aa21.34■■□□□ 1.01
SNCAIP-204ENST00000395466 FANCD2Q9BXW9 1451 aa21.34■■□□□ 1.01
SNCAIP-204ENST00000395466 CUX2O14529 1486 aa21.31■■□□□ 1
SNCAIP-204ENST00000395466 ARAP1Q96P48 1450 aa21.3■■□□□ 1
SNCAIP-204ENST00000395466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.27■■□□□ 1
SNCAIP-204ENST00000395466 IGF1RP08069 1367 aa21.27■■□□□ 1
SNCAIP-204ENST00000395466 DNMBPQ6XZF7 1577 aa21.26■□□□□ 0.99
SNCAIP-204ENST00000395466 NESP48681 1621 aa21.26■□□□□ 0.99
SNCAIP-204ENST00000395466 RANGAP1P46060 587 aaPredicted RBP21.23■□□□□ 0.99
SNCAIP-204ENST00000395466 LAMC3Q9Y6N6 1575 aa21.21■□□□□ 0.99
SNCAIP-204ENST00000395466 TOPBP1Q92547 1522 aa21.2■□□□□ 0.98
SNCAIP-204ENST00000395466 CCER1Q8TC90 406 aaPredicted RBP21.2■□□□□ 0.98
SNCAIP-204ENST00000395466 ARHGAP35Q9NRY4 1499 aa21.17■□□□□ 0.98
SNCAIP-204ENST00000395466 POLA1P09884 1462 aaPredicted RBP21.15■□□□□ 0.98
SNCAIP-204ENST00000395466 CARMIL1Q5VZK9 1371 aa21.15■□□□□ 0.98
SNCAIP-204ENST00000395466 APLP2Q06481 763 aa21.15■□□□□ 0.98
SNCAIP-204ENST00000395466 ABCA10Q8WWZ4 1543 aa21.14■□□□□ 0.98
SNCAIP-204ENST00000395466 RAD54L2Q9Y4B4 1467 aa21.13■□□□□ 0.97
SNCAIP-204ENST00000395466 URB2Q14146 1524 aaKnown RBP21.09■□□□□ 0.97
SNCAIP-204ENST00000395466 WDR97A6NE52 1622 aa21.08■□□□□ 0.97
SNCAIP-204ENST00000395466 DNAJC5BQ9UF47 199 aa21.06■□□□□ 0.96
SNCAIP-204ENST00000395466 CUL7Q14999 1698 aa21.01■□□□□ 0.95
SNCAIP-204ENST00000395466 KANK4Q5T7N3 995 aaPredicted RBP21.01■□□□□ 0.95
SNCAIP-204ENST00000395466 KIF21AQ7Z4S6 1674 aa21■□□□□ 0.95
SNCAIP-204ENST00000395466 PDS5BQ9NTI5 1447 aa21■□□□□ 0.95
SNCAIP-204ENST00000395466 HNRNPUL2Q1KMD3 747 aaKnown RBP20.99■□□□□ 0.95
SNCAIP-204ENST00000395466 ABCA5Q8WWZ7 1642 aa20.95■□□□□ 0.94
SNCAIP-204ENST00000395466 MAP3K1Q13233 1512 aa20.93■□□□□ 0.94
SNCAIP-204ENST00000395466 RRBP1Q9P2E9 1410 aaKnown RBP20.92■□□□□ 0.94
SNCAIP-204ENST00000395466 CTTNBP2Q8WZ74 1663 aa20.92■□□□□ 0.94
SNCAIP-204ENST00000395466 TIAM1Q13009 1591 aa20.9■□□□□ 0.94
SNCAIP-204ENST00000395466 TARBP1Q13395 1621 aaKnown RBP20.86■□□□□ 0.93
SNCAIP-204ENST00000395466 EFCAB5A4FU69 1503 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms