RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 NISCHQ9Y2I1 1504 aa33.93■■■■□ 3.02
RAPGEF3-203ENST00000395360 CCDC180Q9P1Z9 1646 aa29.96■■■□□ 2.39
RAPGEF3-203ENST00000395360 ABCC9O60706 1549 aa28.71■■■□□ 2.19
RAPGEF3-203ENST00000395360 ZCCHC6Q5VYS8 1495 aaKnown RBP28.39■■■□□ 2.14
RAPGEF3-203ENST00000395360 DCAF1Q9Y4B6 1507 aa28.16■■■□□ 2.1
RAPGEF3-203ENST00000395360 MYO15BQ96JP2 1530 aa28.09■■■□□ 2.09
RAPGEF3-203ENST00000395360 DCAF8L2P0C7V8 631 aa28.04■■■□□ 2.08
RAPGEF3-203ENST00000395360 NACADO15069 1562 aa28.03■■■□□ 2.08
RAPGEF3-203ENST00000395360 RB1CC1Q8TDY2 1594 aa27.92■■■□□ 2.06
RAPGEF3-203ENST00000395360 SHROOM4Q9ULL8 1493 aa27.79■■■□□ 2.04
RAPGEF3-203ENST00000395360 SCRIBQ14160 1630 aa27.31■■□□□ 1.96
RAPGEF3-203ENST00000395360 UNC13AQ9UPW8 1703 aa27.24■■□□□ 1.95
RAPGEF3-203ENST00000395360 SUPT5HO00267 1087 aaKnown RBP27.12■■□□□ 1.93
RAPGEF3-203ENST00000395360 BICRAQ9NZM4 1560 aa27.02■■□□□ 1.92
RAPGEF3-203ENST00000395360 PABPN1Q86U42 306 aaKnown RBP eCLIP26.89■■□□□ 1.9
RAPGEF3-203ENST00000395360 CECR2Q9BXF3 1484 aa26.33■■□□□ 1.81
RAPGEF3-203ENST00000395360 BAZ1AQ9NRL2 1556 aaPredicted RBP26.28■■□□□ 1.8
RAPGEF3-203ENST00000395360 EIF4G1Q04637 1599 aaKnown RBP26.28■■□□□ 1.8
RAPGEF3-203ENST00000395360 CHIC1Q5VXU3 224 aa26.25■■□□□ 1.79
RAPGEF3-203ENST00000395360 SMARCA4P51532 1647 aa26.21■■□□□ 1.79
RAPGEF3-203ENST00000395360 MROH2BQ7Z745 1585 aa26.13■■□□□ 1.77
RAPGEF3-203ENST00000395360 RSF1Q96T23 1441 aaPredicted RBP26.04■■□□□ 1.76
RAPGEF3-203ENST00000395360 CC2D2AQ9P2K1 1620 aa26.01■■□□□ 1.76
RAPGEF3-203ENST00000395360 PEG3Q9GZU2 1588 aa25.98■■□□□ 1.75
RAPGEF3-203ENST00000395360 SMARCA2P51531 1590 aa25.95■■□□□ 1.75
RAPGEF3-203ENST00000395360 ATAD2BQ9ULI0 1458 aa25.92■■□□□ 1.74
RAPGEF3-203ENST00000395360 WIZO95785 1651 aa25.87■■□□□ 1.73
RAPGEF3-203ENST00000395360 NCAPD3P42695 1498 aa25.85■■□□□ 1.73
RAPGEF3-203ENST00000395360 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
RAPGEF3-203ENST00000395360 HMGXB3Q12766 1538 aa25.79■■□□□ 1.72
RAPGEF3-203ENST00000395360 BAZ1BQ9UIG0 1483 aaKnown RBP25.75■■□□□ 1.71
RAPGEF3-203ENST00000395360 TOP2AP11388 1531 aaKnown RBP25.68■■□□□ 1.7
RAPGEF3-203ENST00000395360 LOC105371045A0A1W2PR82 267 aa25.42■■□□□ 1.66
RAPGEF3-203ENST00000395360 CCDC88BA6NC98 1476 aa25.35■■□□□ 1.65
RAPGEF3-203ENST00000395360 TRIM41Q8WV44 630 aa25.34■■□□□ 1.65
RAPGEF3-203ENST00000395360 CADPSQ9ULU8 1353 aa25.12■■□□□ 1.61
RAPGEF3-203ENST00000395360 CFTRP13569 1480 aa25.09■■□□□ 1.61
RAPGEF3-203ENST00000395360 LAMC3Q9Y6N6 1575 aa25.08■■□□□ 1.61
RAPGEF3-203ENST00000395360 PCGF6Q9BYE7 350 aa25.08■■□□□ 1.61
RAPGEF3-203ENST00000395360 FAM9AQ8IZU1 332 aaPredicted RBP25.05■■□□□ 1.6
RAPGEF3-203ENST00000395360 NESP48681 1621 aa24.99■■□□□ 1.59
RAPGEF3-203ENST00000395360 PRDM2Q13029 1718 aa24.94■■□□□ 1.58
RAPGEF3-203ENST00000395360 PDS5BQ9NTI5 1447 aa24.9■■□□□ 1.58
RAPGEF3-203ENST00000395360 HRCP23327 699 aa24.86■■□□□ 1.57
RAPGEF3-203ENST00000395360 FANCD2Q9BXW9 1451 aa24.82■■□□□ 1.56
RAPGEF3-203ENST00000395360 EHMT2Q96KQ7 1210 aa24.81■■□□□ 1.56
RAPGEF3-203ENST00000395360 ABCC8Q09428 1581 aa24.75■■□□□ 1.55
RAPGEF3-203ENST00000395360 CEP164Q9UPV0 1460 aa24.74■■□□□ 1.55
RAPGEF3-203ENST00000395360 KIF21AQ7Z4S6 1674 aa24.73■■□□□ 1.55
RAPGEF3-203ENST00000395360 ERCC6Q03468 1493 aa24.73■■□□□ 1.55
RAPGEF3-203ENST00000395360 TRIM26Q12899 539 aaPredicted RBP24.72■■□□□ 1.55
RAPGEF3-203ENST00000395360 MRC2Q9UBG0 1479 aa24.6■■□□□ 1.53
RAPGEF3-203ENST00000395360 WRNQ14191 1432 aaPredicted RBP eCLIP24.56■■□□□ 1.52
RAPGEF3-203ENST00000395360 THOC2Q8NI27 1593 aaKnown RBP24.54■■□□□ 1.52
RAPGEF3-203ENST00000395360 URB2Q14146 1524 aaKnown RBP24.52■■□□□ 1.52
RAPGEF3-203ENST00000395360 DNMBPQ6XZF7 1577 aa24.52■■□□□ 1.52
RAPGEF3-203ENST00000395360 WDR62O43379 1518 aa24.51■■□□□ 1.51
RAPGEF3-203ENST00000395360 CUX1P39880 1505 aa24.49■■□□□ 1.51
RAPGEF3-203ENST00000395360 TOPBP1Q92547 1522 aa24.48■■□□□ 1.51
RAPGEF3-203ENST00000395360 SOGA1O94964 1423 aa24.46■■□□□ 1.51
RAPGEF3-203ENST00000395360 TOP2BQ02880 1626 aa24.46■■□□□ 1.51
RAPGEF3-203ENST00000395360 BIVM-ERCC5R4GMW8 1640 aa24.44■■□□□ 1.5
RAPGEF3-203ENST00000395360 SYNJ1O43426 1573 aa24.44■■□□□ 1.5
RAPGEF3-203ENST00000395360 PPARGC1BQ86YN6 1023 aaKnown RBP24.35■■□□□ 1.49
RAPGEF3-203ENST00000395360 EEA1Q15075 1411 aa24.34■■□□□ 1.49
RAPGEF3-203ENST00000395360 RUSC2Q8N2Y8 1516 aa24.34■■□□□ 1.49
RAPGEF3-203ENST00000395360 FGD5Q6ZNL6 1462 aa24.33■■□□□ 1.48
RAPGEF3-203ENST00000395360 CSRNP3Q8WYN3 585 aa24.32■■□□□ 1.48
RAPGEF3-203ENST00000395360 POLA1P09884 1462 aaPredicted RBP24.31■■□□□ 1.48
RAPGEF3-203ENST00000395360 CUX2O14529 1486 aa24.31■■□□□ 1.48
RAPGEF3-203ENST00000395360 IFT140Q96RY7 1462 aa24.22■■□□□ 1.47
RAPGEF3-203ENST00000395360 TNIKQ9UKE5 1360 aa24.22■■□□□ 1.47
RAPGEF3-203ENST00000395360 CEP162Q5TB80 1403 aa24.21■■□□□ 1.47
RAPGEF3-203ENST00000395360 UBTFP17480 764 aaKnown RBP24.17■■□□□ 1.46
RAPGEF3-203ENST00000395360 TARBP1Q13395 1621 aaKnown RBP24.17■■□□□ 1.46
RAPGEF3-203ENST00000395360 RAD54L2Q9Y4B4 1467 aa24.17■■□□□ 1.46
RAPGEF3-203ENST00000395360 ABCA10Q8WWZ4 1543 aa24.15■■□□□ 1.46
RAPGEF3-203ENST00000395360 GOLGA3Q08378 1498 aa24.14■■□□□ 1.45
RAPGEF3-203ENST00000395360 WDR97A6NE52 1622 aa24.11■■□□□ 1.45
RAPGEF3-203ENST00000395360 ZEB1P37275 1124 aaPredicted RBP24.05■■□□□ 1.44
RAPGEF3-203ENST00000395360 KIF27Q86VH2 1401 aa24.01■■□□□ 1.43
RAPGEF3-203ENST00000395360 KIF21BO75037 1637 aa24.01■■□□□ 1.43
RAPGEF3-203ENST00000395360 ZNF608Q9ULD9 1512 aaPredicted RBP24.01■■□□□ 1.43
RAPGEF3-203ENST00000395360 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
RAPGEF3-203ENST00000395360 TDRD9Q8NDG6 1382 aaKnown RBP23.99■■□□□ 1.43
RAPGEF3-203ENST00000395360 EIF4G3O43432 1585 aaKnown RBP23.96■■□□□ 1.43
RAPGEF3-203ENST00000395360 GAPVD1Q14C86 1478 aa23.95■■□□□ 1.42
RAPGEF3-203ENST00000395360 AQRO60306 1485 aaKnown RBP eCLIP23.94■■□□□ 1.42
RAPGEF3-203ENST00000395360 TTBK1Q5TCY1 1321 aaPredicted RBP23.94■■□□□ 1.42
RAPGEF3-203ENST00000395360 RAPGEF2Q9Y4G8 1499 aa23.89■■□□□ 1.42
RAPGEF3-203ENST00000395360 GRIN2BQ13224 1484 aa23.89■■□□□ 1.41
RAPGEF3-203ENST00000395360 ERICH3Q5RHP9 1530 aa23.88■■□□□ 1.41
RAPGEF3-203ENST00000395360 PBRM1Q86U86 1689 aa23.86■■□□□ 1.41
RAPGEF3-203ENST00000395360 CLIP1P30622 1438 aa23.84■■□□□ 1.41
RAPGEF3-203ENST00000395360 IGF1RP08069 1367 aa23.82■■□□□ 1.4
RAPGEF3-203ENST00000395360 MAGI1Q96QZ7 1491 aaPredicted RBP23.79■■□□□ 1.4
RAPGEF3-203ENST00000395360 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.77■■□□□ 1.4
RAPGEF3-203ENST00000395360 CUL7Q14999 1698 aa23.76■■□□□ 1.39
RAPGEF3-203ENST00000395360 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
RAPGEF3-203ENST00000395360 PRXQ9BXM0 1461 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms