RNA–Protein interactions for RNA: ENST00000394072.7

TNS4-202, Transcript of tensin 4, humanhuman

TSL 1 (best)

Gene TNS4, Length 2,174 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS4-202ENST00000394072 NISCHQ9Y2I1 1504 aa24.97■■□□□ 1.59
TNS4-202ENST00000394072 CCDC180Q9P1Z9 1646 aa21.61■■□□□ 1.05
TNS4-202ENST00000394072 ZCCHC6Q5VYS8 1495 aaKnown RBP21.09■□□□□ 0.97
TNS4-202ENST00000394072 DCAF1Q9Y4B6 1507 aa20.71■□□□□ 0.91
TNS4-202ENST00000394072 SHROOM4Q9ULL8 1493 aa20.63■□□□□ 0.89
TNS4-202ENST00000394072 DCAF8L2P0C7V8 631 aa20.31■□□□□ 0.84
TNS4-202ENST00000394072 MYO15BQ96JP2 1530 aa20.27■□□□□ 0.83
TNS4-202ENST00000394072 SUPT5HO00267 1087 aaKnown RBP20.14■□□□□ 0.81
TNS4-202ENST00000394072 NACADO15069 1562 aa19.95■□□□□ 0.78
TNS4-202ENST00000394072 ABCC9O60706 1549 aa19.88■□□□□ 0.77
TNS4-202ENST00000394072 SCRIBQ14160 1630 aa19.85■□□□□ 0.77
TNS4-202ENST00000394072 RB1CC1Q8TDY2 1594 aa19.64■□□□□ 0.73
TNS4-202ENST00000394072 CHIC1Q5VXU3 224 aa19.61■□□□□ 0.73
TNS4-202ENST00000394072 RSF1Q96T23 1441 aaPredicted RBP19.55■□□□□ 0.72
TNS4-202ENST00000394072 UNC13AQ9UPW8 1703 aa19.34■□□□□ 0.69
TNS4-202ENST00000394072 CECR2Q9BXF3 1484 aa19.3■□□□□ 0.68
TNS4-202ENST00000394072 HRCP23327 699 aa19.29■□□□□ 0.68
TNS4-202ENST00000394072 MROH2BQ7Z745 1585 aa19.29■□□□□ 0.68
TNS4-202ENST00000394072 BAZ1AQ9NRL2 1556 aaPredicted RBP19.26■□□□□ 0.67
TNS4-202ENST00000394072 WIZO95785 1651 aa19.19■□□□□ 0.66
TNS4-202ENST00000394072 SMARCA4P51532 1647 aa19.11■□□□□ 0.65
TNS4-202ENST00000394072 PCGF6Q9BYE7 350 aa19.07■□□□□ 0.64
TNS4-202ENST00000394072 BICRAQ9NZM4 1560 aa19.02■□□□□ 0.64
TNS4-202ENST00000394072 TOP2AP11388 1531 aaKnown RBP19.02■□□□□ 0.63
TNS4-202ENST00000394072 EIF4G1Q04637 1599 aaKnown RBP18.94■□□□□ 0.62
TNS4-202ENST00000394072 TRIM41Q8WV44 630 aa18.93■□□□□ 0.62
TNS4-202ENST00000394072 PEG3Q9GZU2 1588 aa18.88■□□□□ 0.61
TNS4-202ENST00000394072 SMARCA2P51531 1590 aa18.85■□□□□ 0.61
TNS4-202ENST00000394072 LOC105371045A0A1W2PR82 267 aa18.83■□□□□ 0.6
TNS4-202ENST00000394072 PPARGC1BQ86YN6 1023 aaKnown RBP18.82■□□□□ 0.6
TNS4-202ENST00000394072 CCDC88BA6NC98 1476 aa18.79■□□□□ 0.6
TNS4-202ENST00000394072 PABPN1Q86U42 306 aaKnown RBP eCLIP18.72■□□□□ 0.59
TNS4-202ENST00000394072 TRIM26Q12899 539 aaPredicted RBP18.63■□□□□ 0.57
TNS4-202ENST00000394072 DNAJC5BQ9UF47 199 aa18.61■□□□□ 0.57
TNS4-202ENST00000394072 ATAD2BQ9ULI0 1458 aa18.61■□□□□ 0.57
TNS4-202ENST00000394072 PELP1Q8IZL8 1130 aaKnown RBP18.57■□□□□ 0.56
TNS4-202ENST00000394072 ABCC8Q09428 1581 aa18.56■□□□□ 0.56
TNS4-202ENST00000394072 BAZ1BQ9UIG0 1483 aaKnown RBP18.54■□□□□ 0.56
TNS4-202ENST00000394072 FAM9AQ8IZU1 332 aaPredicted RBP18.54■□□□□ 0.56
TNS4-202ENST00000394072 EEA1Q15075 1411 aa18.48■□□□□ 0.55
TNS4-202ENST00000394072 HMGXB3Q12766 1538 aa18.43■□□□□ 0.54
TNS4-202ENST00000394072 ZEB1P37275 1124 aaPredicted RBP18.42■□□□□ 0.54
TNS4-202ENST00000394072 WRNQ14191 1432 aaPredicted RBP eCLIP18.39■□□□□ 0.54
TNS4-202ENST00000394072 NCAPD3P42695 1498 aa18.37■□□□□ 0.53
TNS4-202ENST00000394072 SYNJ1O43426 1573 aa18.31■□□□□ 0.52
TNS4-202ENST00000394072 SOGA1O94964 1423 aa18.3■□□□□ 0.52
TNS4-202ENST00000394072 TNIKQ9UKE5 1360 aa18.26■□□□□ 0.51
TNS4-202ENST00000394072 CSRNP3Q8WYN3 585 aa18.24■□□□□ 0.51
TNS4-202ENST00000394072 TOP2BQ02880 1626 aa18.24■□□□□ 0.51
TNS4-202ENST00000394072 BIVM-ERCC5R4GMW8 1640 aa18.24■□□□□ 0.51
TNS4-202ENST00000394072 KIF21BO75037 1637 aa18.23■□□□□ 0.51
TNS4-202ENST00000394072 MYT1Q01538 1121 aa18.23■□□□□ 0.51
TNS4-202ENST00000394072 GOLGA3Q08378 1498 aa18.22■□□□□ 0.51
TNS4-202ENST00000394072 EHMT2Q96KQ7 1210 aa18.21■□□□□ 0.51
TNS4-202ENST00000394072 PRDM2Q13029 1718 aa18.21■□□□□ 0.51
TNS4-202ENST00000394072 RUSC2Q8N2Y8 1516 aa18.2■□□□□ 0.5
TNS4-202ENST00000394072 CEP162Q5TB80 1403 aa18.18■□□□□ 0.5
TNS4-202ENST00000394072 CEP164Q9UPV0 1460 aa18.17■□□□□ 0.5
TNS4-202ENST00000394072 CFTRP13569 1480 aa18.12■□□□□ 0.49
TNS4-202ENST00000394072 UBTFP17480 764 aaKnown RBP18.04■□□□□ 0.48
TNS4-202ENST00000394072 CUX1P39880 1505 aa18.01■□□□□ 0.47
TNS4-202ENST00000394072 ERICH3Q5RHP9 1530 aa18■□□□□ 0.47
TNS4-202ENST00000394072 CC2D2AQ9P2K1 1620 aa17.98■□□□□ 0.47
TNS4-202ENST00000394072 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
TNS4-202ENST00000394072 RAPGEF2Q9Y4G8 1499 aa17.93■□□□□ 0.46
TNS4-202ENST00000394072 PRXQ9BXM0 1461 aa17.92■□□□□ 0.46
TNS4-202ENST00000394072 CLIP1P30622 1438 aa17.92■□□□□ 0.46
TNS4-202ENST00000394072 CADPSQ9ULU8 1353 aa17.92■□□□□ 0.46
TNS4-202ENST00000394072 KIF27Q86VH2 1401 aa17.89■□□□□ 0.45
TNS4-202ENST00000394072 VPS8Q8N3P4 1428 aa17.86■□□□□ 0.45
TNS4-202ENST00000394072 CCER1Q8TC90 406 aaPredicted RBP17.82■□□□□ 0.44
TNS4-202ENST00000394072 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.8■□□□□ 0.44
TNS4-202ENST00000394072 DNAJC5Q9H3Z4 198 aa17.79■□□□□ 0.44
TNS4-202ENST00000394072 ACIN1Q9UKV3 1341 aaKnown RBP17.73■□□□□ 0.43
TNS4-202ENST00000394072 FANCD2Q9BXW9 1451 aa17.73■□□□□ 0.43
TNS4-202ENST00000394072 FGD5Q6ZNL6 1462 aa17.72■□□□□ 0.43
TNS4-202ENST00000394072 DNMBPQ6XZF7 1577 aa17.71■□□□□ 0.43
TNS4-202ENST00000394072 LAMC3Q9Y6N6 1575 aa17.7■□□□□ 0.42
TNS4-202ENST00000394072 CUX2O14529 1486 aa17.69■□□□□ 0.42
TNS4-202ENST00000394072 ARAP1Q96P48 1450 aa17.67■□□□□ 0.42
TNS4-202ENST00000394072 APLP2Q06481 763 aa17.67■□□□□ 0.42
TNS4-202ENST00000394072 NEUROD1Q13562 356 aa17.65■□□□□ 0.42
TNS4-202ENST00000394072 DIEXFQ68CQ4 756 aaKnown RBP17.65■□□□□ 0.42
TNS4-202ENST00000394072 IGF1RP08069 1367 aa17.64■□□□□ 0.42
TNS4-202ENST00000394072 CENPBP07199 599 aaPredicted RBP17.63■□□□□ 0.41
TNS4-202ENST00000394072 TOPBP1Q92547 1522 aa17.61■□□□□ 0.41
TNS4-202ENST00000394072 ABCA10Q8WWZ4 1543 aa17.6■□□□□ 0.41
TNS4-202ENST00000394072 TTBK1Q5TCY1 1321 aaPredicted RBP17.59■□□□□ 0.41
TNS4-202ENST00000394072 CARMIL1Q5VZK9 1371 aa17.57■□□□□ 0.4
TNS4-202ENST00000394072 ARHGAP35Q9NRY4 1499 aa17.57■□□□□ 0.4
TNS4-202ENST00000394072 CUL7Q14999 1698 aa17.57■□□□□ 0.4
TNS4-202ENST00000394072 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
TNS4-202ENST00000394072 WDR97A6NE52 1622 aa17.56■□□□□ 0.4
TNS4-202ENST00000394072 NESP48681 1621 aa17.55■□□□□ 0.4
TNS4-202ENST00000394072 GTF3C3Q9Y5Q9 886 aa17.54■□□□□ 0.4
TNS4-202ENST00000394072 MAP3K1Q13233 1512 aa17.52■□□□□ 0.39
TNS4-202ENST00000394072 PDS5BQ9NTI5 1447 aa17.5■□□□□ 0.39
TNS4-202ENST00000394072 RANGAP1P46060 587 aaPredicted RBP17.49■□□□□ 0.39
TNS4-202ENST00000394072 CTTNBP2Q8WZ74 1663 aa17.48■□□□□ 0.39
TNS4-202ENST00000394072 URB2Q14146 1524 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms