RNA–Protein interactions for RNA: ENST00000388882.5

TNFAIP8-202, Transcript of TNF alpha induced protein 8, humanhuman

TSL 4

Gene TNFAIP8, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP8-202ENST00000388882 NISCHQ9Y2I1 1504 aa24.54■■□□□ 1.52
TNFAIP8-202ENST00000388882 CCDC180Q9P1Z9 1646 aa21.76■■□□□ 1.07
TNFAIP8-202ENST00000388882 ABCC9O60706 1549 aa21.14■□□□□ 0.97
TNFAIP8-202ENST00000388882 DCAF8L2P0C7V8 631 aa20.53■□□□□ 0.88
TNFAIP8-202ENST00000388882 ZCCHC6Q5VYS8 1495 aaKnown RBP20.47■□□□□ 0.87
TNFAIP8-202ENST00000388882 NACADO15069 1562 aa20.42■□□□□ 0.86
TNFAIP8-202ENST00000388882 RB1CC1Q8TDY2 1594 aa20.42■□□□□ 0.86
TNFAIP8-202ENST00000388882 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
TNFAIP8-202ENST00000388882 DCAF1Q9Y4B6 1507 aa20.3■□□□□ 0.84
TNFAIP8-202ENST00000388882 UNC13AQ9UPW8 1703 aa19.95■□□□□ 0.78
TNFAIP8-202ENST00000388882 SCRIBQ14160 1630 aa19.89■□□□□ 0.77
TNFAIP8-202ENST00000388882 PABPN1Q86U42 306 aaKnown RBP eCLIP19.79■□□□□ 0.76
TNFAIP8-202ENST00000388882 BICRAQ9NZM4 1560 aa19.74■□□□□ 0.75
TNFAIP8-202ENST00000388882 SHROOM4Q9ULL8 1493 aa19.56■□□□□ 0.72
TNFAIP8-202ENST00000388882 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
TNFAIP8-202ENST00000388882 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
TNFAIP8-202ENST00000388882 DNAJC5BQ9UF47 199 aa19.19■□□□□ 0.66
TNFAIP8-202ENST00000388882 CC2D2AQ9P2K1 1620 aa19.12■□□□□ 0.65
TNFAIP8-202ENST00000388882 CECR2Q9BXF3 1484 aa19.09■□□□□ 0.65
TNFAIP8-202ENST00000388882 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.64
TNFAIP8-202ENST00000388882 SMARCA4P51532 1647 aa19.02■□□□□ 0.64
TNFAIP8-202ENST00000388882 MROH2BQ7Z745 1585 aa18.91■□□□□ 0.62
TNFAIP8-202ENST00000388882 SMARCA2P51531 1590 aa18.87■□□□□ 0.61
TNFAIP8-202ENST00000388882 ATAD2BQ9ULI0 1458 aa18.85■□□□□ 0.61
TNFAIP8-202ENST00000388882 NCAPD3P42695 1498 aa18.81■□□□□ 0.6
TNFAIP8-202ENST00000388882 PEG3Q9GZU2 1588 aa18.8■□□□□ 0.6
TNFAIP8-202ENST00000388882 RSF1Q96T23 1441 aaPredicted RBP18.75■□□□□ 0.59
TNFAIP8-202ENST00000388882 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
TNFAIP8-202ENST00000388882 WIZO95785 1651 aa18.74■□□□□ 0.59
TNFAIP8-202ENST00000388882 BAZ1BQ9UIG0 1483 aaKnown RBP18.74■□□□□ 0.59
TNFAIP8-202ENST00000388882 CHIC1Q5VXU3 224 aa18.57■□□□□ 0.56
TNFAIP8-202ENST00000388882 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
TNFAIP8-202ENST00000388882 SUPT5HO00267 1087 aaKnown RBP18.49■□□□□ 0.55
TNFAIP8-202ENST00000388882 CCDC88BA6NC98 1476 aa18.33■□□□□ 0.52
TNFAIP8-202ENST00000388882 NESP48681 1621 aa18.32■□□□□ 0.52
TNFAIP8-202ENST00000388882 LAMC3Q9Y6N6 1575 aa18.32■□□□□ 0.52
TNFAIP8-202ENST00000388882 CADPSQ9ULU8 1353 aa18.3■□□□□ 0.52
TNFAIP8-202ENST00000388882 ERCC6Q03468 1493 aa18.25■□□□□ 0.51
TNFAIP8-202ENST00000388882 PDS5BQ9NTI5 1447 aa18.21■□□□□ 0.51
TNFAIP8-202ENST00000388882 CFTRP13569 1480 aa18.2■□□□□ 0.5
TNFAIP8-202ENST00000388882 KIF21AQ7Z4S6 1674 aa18.14■□□□□ 0.49
TNFAIP8-202ENST00000388882 PRDM2Q13029 1718 aa18.14■□□□□ 0.49
TNFAIP8-202ENST00000388882 FANCD2Q9BXW9 1451 aa18.09■□□□□ 0.49
TNFAIP8-202ENST00000388882 CEP164Q9UPV0 1460 aa18.07■□□□□ 0.48
TNFAIP8-202ENST00000388882 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
TNFAIP8-202ENST00000388882 MRC2Q9UBG0 1479 aa17.99■□□□□ 0.47
TNFAIP8-202ENST00000388882 CUX2O14529 1486 aa17.94■□□□□ 0.46
TNFAIP8-202ENST00000388882 WDR62O43379 1518 aa17.91■□□□□ 0.46
TNFAIP8-202ENST00000388882 URB2Q14146 1524 aaKnown RBP17.88■□□□□ 0.45
TNFAIP8-202ENST00000388882 ABCC8Q09428 1581 aa17.85■□□□□ 0.45
TNFAIP8-202ENST00000388882 DNMBPQ6XZF7 1577 aa17.82■□□□□ 0.44
TNFAIP8-202ENST00000388882 TOPBP1Q92547 1522 aa17.82■□□□□ 0.44
TNFAIP8-202ENST00000388882 CUX1P39880 1505 aa17.73■□□□□ 0.43
TNFAIP8-202ENST00000388882 WRNQ14191 1432 aaPredicted RBP eCLIP17.71■□□□□ 0.43
TNFAIP8-202ENST00000388882 IFT140Q96RY7 1462 aa17.68■□□□□ 0.42
TNFAIP8-202ENST00000388882 POLA1P09884 1462 aaPredicted RBP17.67■□□□□ 0.42
TNFAIP8-202ENST00000388882 FGD5Q6ZNL6 1462 aa17.66■□□□□ 0.42
TNFAIP8-202ENST00000388882 TOP2BQ02880 1626 aa17.65■□□□□ 0.42
TNFAIP8-202ENST00000388882 SYNJ1O43426 1573 aa17.64■□□□□ 0.41
TNFAIP8-202ENST00000388882 BIVM-ERCC5R4GMW8 1640 aa17.64■□□□□ 0.41
TNFAIP8-202ENST00000388882 SOGA1O94964 1423 aa17.63■□□□□ 0.41
TNFAIP8-202ENST00000388882 RAD54L2Q9Y4B4 1467 aa17.6■□□□□ 0.41
TNFAIP8-202ENST00000388882 TARBP1Q13395 1621 aaKnown RBP17.59■□□□□ 0.41
TNFAIP8-202ENST00000388882 ZNF608Q9ULD9 1512 aaPredicted RBP17.56■□□□□ 0.4
TNFAIP8-202ENST00000388882 EIF4G3O43432 1585 aaKnown RBP17.52■□□□□ 0.39
TNFAIP8-202ENST00000388882 TDRD9Q8NDG6 1382 aaKnown RBP17.5■□□□□ 0.39
TNFAIP8-202ENST00000388882 WDR97A6NE52 1622 aa17.5■□□□□ 0.39
TNFAIP8-202ENST00000388882 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.39
TNFAIP8-202ENST00000388882 ABCA10Q8WWZ4 1543 aa17.49■□□□□ 0.39
TNFAIP8-202ENST00000388882 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
TNFAIP8-202ENST00000388882 GAPVD1Q14C86 1478 aa17.42■□□□□ 0.38
TNFAIP8-202ENST00000388882 ABCA5Q8WWZ7 1642 aa17.4■□□□□ 0.38
TNFAIP8-202ENST00000388882 PBRM1Q86U86 1689 aa17.39■□□□□ 0.37
TNFAIP8-202ENST00000388882 GRIN2BQ13224 1484 aa17.39■□□□□ 0.37
TNFAIP8-202ENST00000388882 SNAPC4Q5SXM2 1469 aa17.35■□□□□ 0.37
TNFAIP8-202ENST00000388882 KIF27Q86VH2 1401 aa17.34■□□□□ 0.37
TNFAIP8-202ENST00000388882 MAGI1Q96QZ7 1491 aaPredicted RBP17.33■□□□□ 0.37
TNFAIP8-202ENST00000388882 FBLN2P98095 1184 aa17.32■□□□□ 0.36
TNFAIP8-202ENST00000388882 ERICH3Q5RHP9 1530 aa17.3■□□□□ 0.36
TNFAIP8-202ENST00000388882 CHD1O14646 1710 aa17.28■□□□□ 0.36
TNFAIP8-202ENST00000388882 CHMP7Q8WUX9 453 aaPredicted RBP17.28■□□□□ 0.36
TNFAIP8-202ENST00000388882 OSCARQ8IYS5 282 aa17.26■□□□□ 0.35
TNFAIP8-202ENST00000388882 SYNJ2O15056 1496 aa17.25■□□□□ 0.35
TNFAIP8-202ENST00000388882 ADAMTS12P58397 1594 aa17.23■□□□□ 0.35
TNFAIP8-202ENST00000388882 FHAD1B1AJZ9 1412 aa17.22■□□□□ 0.35
TNFAIP8-202ENST00000388882 IGF1RP08069 1367 aa17.21■□□□□ 0.35
TNFAIP8-202ENST00000388882 RUSC2Q8N2Y8 1516 aa17.2■□□□□ 0.34
TNFAIP8-202ENST00000388882 CUL7Q14999 1698 aa17.2■□□□□ 0.34
TNFAIP8-202ENST00000388882 DNAJC5Q9H3Z4 198 aa17.18■□□□□ 0.34
TNFAIP8-202ENST00000388882 GRIN2AQ12879 1464 aa17.16■□□□□ 0.34
TNFAIP8-202ENST00000388882 CARMIL1Q5VZK9 1371 aa17.14■□□□□ 0.33
TNFAIP8-202ENST00000388882 EEA1Q15075 1411 aa17.12■□□□□ 0.33
TNFAIP8-202ENST00000388882 FAM9AQ8IZU1 332 aaPredicted RBP17.09■□□□□ 0.33
TNFAIP8-202ENST00000388882 CSRNP3Q8WYN3 585 aa17.08■□□□□ 0.32
TNFAIP8-202ENST00000388882 CEP170Q5SW79 1584 aa17.06■□□□□ 0.32
TNFAIP8-202ENST00000388882 RAPGEF2Q9Y4G8 1499 aa17.06■□□□□ 0.32
TNFAIP8-202ENST00000388882 CLASP1Q7Z460 1538 aa17.06■□□□□ 0.32
TNFAIP8-202ENST00000388882 NUP160Q12769 1436 aa17.05■□□□□ 0.32
TNFAIP8-202ENST00000388882 PRXQ9BXM0 1461 aa17.01■□□□□ 0.31
TNFAIP8-202ENST00000388882 KIAA0586Q9BVV6 1533 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms