RNA–Protein interactions for RNA: ENST00000384619.1

RNVU1-17-201, Transcript of RNA, variant U1 small nuclear 17, humanhuman

BASIC

Gene RNVU1-17, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-17-201ENST00000384619 NISCHQ9Y2I1 1504 aa23.18■■□□□ 1.3
RNVU1-17-201ENST00000384619 CCDC180Q9P1Z9 1646 aa20.32■□□□□ 0.84
RNVU1-17-201ENST00000384619 ABCC9O60706 1549 aa19.66■□□□□ 0.74
RNVU1-17-201ENST00000384619 DCAF8L2P0C7V8 631 aa19.39■□□□□ 0.69
RNVU1-17-201ENST00000384619 ZCCHC6Q5VYS8 1495 aaKnown RBP19.35■□□□□ 0.69
RNVU1-17-201ENST00000384619 DCAF1Q9Y4B6 1507 aa19.21■□□□□ 0.67
RNVU1-17-201ENST00000384619 MYO15BQ96JP2 1530 aa19.2■□□□□ 0.66
RNVU1-17-201ENST00000384619 NACADO15069 1562 aa19.15■□□□□ 0.66
RNVU1-17-201ENST00000384619 RB1CC1Q8TDY2 1594 aa19.06■□□□□ 0.64
RNVU1-17-201ENST00000384619 SCRIBQ14160 1630 aa18.58■□□□□ 0.56
RNVU1-17-201ENST00000384619 SHROOM4Q9ULL8 1493 aa18.54■□□□□ 0.56
RNVU1-17-201ENST00000384619 PABPN1Q86U42 306 aaKnown RBP eCLIP18.52■□□□□ 0.56
RNVU1-17-201ENST00000384619 BICRAQ9NZM4 1560 aa18.38■□□□□ 0.53
RNVU1-17-201ENST00000384619 UNC13AQ9UPW8 1703 aa18.35■□□□□ 0.53
RNVU1-17-201ENST00000384619 CECR2Q9BXF3 1484 aa18■□□□□ 0.47
RNVU1-17-201ENST00000384619 BAZ1AQ9NRL2 1556 aaPredicted RBP17.94■□□□□ 0.46
RNVU1-17-201ENST00000384619 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
RNVU1-17-201ENST00000384619 MROH2BQ7Z745 1585 aa17.83■□□□□ 0.45
RNVU1-17-201ENST00000384619 RSF1Q96T23 1441 aaPredicted RBP17.83■□□□□ 0.45
RNVU1-17-201ENST00000384619 SMARCA4P51532 1647 aa17.83■□□□□ 0.44
RNVU1-17-201ENST00000384619 DNAJC5BQ9UF47 199 aa17.77■□□□□ 0.44
RNVU1-17-201ENST00000384619 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
RNVU1-17-201ENST00000384619 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
RNVU1-17-201ENST00000384619 SUPT5HO00267 1087 aaKnown RBP17.73■□□□□ 0.43
RNVU1-17-201ENST00000384619 NCAPD3P42695 1498 aa17.73■□□□□ 0.43
RNVU1-17-201ENST00000384619 CC2D2AQ9P2K1 1620 aa17.72■□□□□ 0.43
RNVU1-17-201ENST00000384619 PEG3Q9GZU2 1588 aa17.69■□□□□ 0.42
RNVU1-17-201ENST00000384619 BAZ1BQ9UIG0 1483 aaKnown RBP17.62■□□□□ 0.41
RNVU1-17-201ENST00000384619 WIZO95785 1651 aa17.58■□□□□ 0.4
RNVU1-17-201ENST00000384619 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
RNVU1-17-201ENST00000384619 TOP2AP11388 1531 aaKnown RBP17.49■□□□□ 0.39
RNVU1-17-201ENST00000384619 CCDC88BA6NC98 1476 aa17.34■□□□□ 0.37
RNVU1-17-201ENST00000384619 CADPSQ9ULU8 1353 aa17.26■□□□□ 0.35
RNVU1-17-201ENST00000384619 CFTRP13569 1480 aa17.18■□□□□ 0.34
RNVU1-17-201ENST00000384619 LAMC3Q9Y6N6 1575 aa17.11■□□□□ 0.33
RNVU1-17-201ENST00000384619 PDS5BQ9NTI5 1447 aa17.11■□□□□ 0.33
RNVU1-17-201ENST00000384619 NESP48681 1621 aa17.07■□□□□ 0.32
RNVU1-17-201ENST00000384619 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
RNVU1-17-201ENST00000384619 ERCC6Q03468 1493 aa16.97■□□□□ 0.31
RNVU1-17-201ENST00000384619 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
RNVU1-17-201ENST00000384619 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
RNVU1-17-201ENST00000384619 MRC2Q9UBG0 1479 aa16.83■□□□□ 0.28
RNVU1-17-201ENST00000384619 WRNQ14191 1432 aaPredicted RBP eCLIP16.82■□□□□ 0.28
RNVU1-17-201ENST00000384619 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
RNVU1-17-201ENST00000384619 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
RNVU1-17-201ENST00000384619 CHIC1Q5VXU3 224 aa16.76■□□□□ 0.27
RNVU1-17-201ENST00000384619 URB2Q14146 1524 aaKnown RBP16.75■□□□□ 0.27
RNVU1-17-201ENST00000384619 KIF21AQ7Z4S6 1674 aa16.74■□□□□ 0.27
RNVU1-17-201ENST00000384619 TOPBP1Q92547 1522 aa16.73■□□□□ 0.27
RNVU1-17-201ENST00000384619 DNMBPQ6XZF7 1577 aa16.71■□□□□ 0.27
RNVU1-17-201ENST00000384619 WDR62O43379 1518 aa16.7■□□□□ 0.26
RNVU1-17-201ENST00000384619 CUX1P39880 1505 aa16.7■□□□□ 0.26
RNVU1-17-201ENST00000384619 THOC2Q8NI27 1593 aaKnown RBP16.66■□□□□ 0.26
RNVU1-17-201ENST00000384619 CUX2O14529 1486 aa16.66■□□□□ 0.26
RNVU1-17-201ENST00000384619 SOGA1O94964 1423 aa16.64■□□□□ 0.25
RNVU1-17-201ENST00000384619 TOP2BQ02880 1626 aa16.64■□□□□ 0.25
RNVU1-17-201ENST00000384619 FGD5Q6ZNL6 1462 aa16.61■□□□□ 0.25
RNVU1-17-201ENST00000384619 POLA1P09884 1462 aaPredicted RBP16.61■□□□□ 0.25
RNVU1-17-201ENST00000384619 SYNJ1O43426 1573 aa16.6■□□□□ 0.25
RNVU1-17-201ENST00000384619 IFT140Q96RY7 1462 aa16.59■□□□□ 0.25
RNVU1-17-201ENST00000384619 BIVM-ERCC5R4GMW8 1640 aa16.58■□□□□ 0.24
RNVU1-17-201ENST00000384619 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
RNVU1-17-201ENST00000384619 ABCA10Q8WWZ4 1543 aa16.5■□□□□ 0.23
RNVU1-17-201ENST00000384619 TDRD9Q8NDG6 1382 aaKnown RBP16.49■□□□□ 0.23
RNVU1-17-201ENST00000384619 KIF27Q86VH2 1401 aa16.48■□□□□ 0.23
RNVU1-17-201ENST00000384619 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
RNVU1-17-201ENST00000384619 EEA1Q15075 1411 aa16.43■□□□□ 0.22
RNVU1-17-201ENST00000384619 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.22
RNVU1-17-201ENST00000384619 GAPVD1Q14C86 1478 aa16.42■□□□□ 0.22
RNVU1-17-201ENST00000384619 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
RNVU1-17-201ENST00000384619 CSRNP3Q8WYN3 585 aa16.4■□□□□ 0.22
RNVU1-17-201ENST00000384619 WDR97A6NE52 1622 aa16.4■□□□□ 0.22
RNVU1-17-201ENST00000384619 IGF1RP08069 1367 aa16.38■□□□□ 0.21
RNVU1-17-201ENST00000384619 GRIN2BQ13224 1484 aa16.37■□□□□ 0.21
RNVU1-17-201ENST00000384619 FAM9AQ8IZU1 332 aaPredicted RBP16.36■□□□□ 0.21
RNVU1-17-201ENST00000384619 RUSC2Q8N2Y8 1516 aa16.32■□□□□ 0.2
RNVU1-17-201ENST00000384619 ERICH3Q5RHP9 1530 aa16.3■□□□□ 0.2
RNVU1-17-201ENST00000384619 CARMIL1Q5VZK9 1371 aa16.29■□□□□ 0.2
RNVU1-17-201ENST00000384619 CHMP7Q8WUX9 453 aaPredicted RBP16.29■□□□□ 0.2
RNVU1-17-201ENST00000384619 ABCA5Q8WWZ7 1642 aa16.29■□□□□ 0.2
RNVU1-17-201ENST00000384619 EIF4G3O43432 1585 aaKnown RBP16.28■□□□□ 0.2
RNVU1-17-201ENST00000384619 MAGI1Q96QZ7 1491 aaPredicted RBP16.28■□□□□ 0.2
RNVU1-17-201ENST00000384619 FHAD1B1AJZ9 1412 aa16.27■□□□□ 0.19
RNVU1-17-201ENST00000384619 FBLN2P98095 1184 aa16.26■□□□□ 0.19
RNVU1-17-201ENST00000384619 SNAPC4Q5SXM2 1469 aa16.23■□□□□ 0.19
RNVU1-17-201ENST00000384619 SYNJ2O15056 1496 aa16.21■□□□□ 0.19
RNVU1-17-201ENST00000384619 PRXQ9BXM0 1461 aa16.2■□□□□ 0.18
RNVU1-17-201ENST00000384619 RAPGEF2Q9Y4G8 1499 aa16.19■□□□□ 0.18
RNVU1-17-201ENST00000384619 OSCARQ8IYS5 282 aa16.17■□□□□ 0.18
RNVU1-17-201ENST00000384619 CUL7Q14999 1698 aa16.15■□□□□ 0.18
RNVU1-17-201ENST00000384619 UBTFP17480 764 aaKnown RBP16.14■□□□□ 0.17
RNVU1-17-201ENST00000384619 PBRM1Q86U86 1689 aa16.13■□□□□ 0.17
RNVU1-17-201ENST00000384619 GRIN2AQ12879 1464 aa16.12■□□□□ 0.17
RNVU1-17-201ENST00000384619 ADAMTS12P58397 1594 aa16.12■□□□□ 0.17
RNVU1-17-201ENST00000384619 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
RNVU1-17-201ENST00000384619 EHMT2Q96KQ7 1210 aa16.08■□□□□ 0.16
RNVU1-17-201ENST00000384619 KIF21BO75037 1637 aa16.06■□□□□ 0.16
RNVU1-17-201ENST00000384619 LOC105371045A0A1W2PR82 267 aa16.06■□□□□ 0.16
RNVU1-17-201ENST00000384619 NUP160Q12769 1436 aa16.05■□□□□ 0.16
RNVU1-17-201ENST00000384619 KIAA0586Q9BVV6 1533 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms