RNA–Protein interactions for RNA: ENST00000381603.7

SIRPB1-204, Transcript of signal regulatory protein beta 1, humanhuman

TSL 1 (best) BASIC

Gene SIRPB1, Length 1,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-204ENST00000381603 NISCHQ9Y2I1 1504 aa25.19■■□□□ 1.62
SIRPB1-204ENST00000381603 CCDC180Q9P1Z9 1646 aa21.9■■□□□ 1.1
SIRPB1-204ENST00000381603 ZCCHC6Q5VYS8 1495 aaKnown RBP21.18■□□□□ 0.98
SIRPB1-204ENST00000381603 DCAF8L2P0C7V8 631 aa20.85■□□□□ 0.93
SIRPB1-204ENST00000381603 DCAF1Q9Y4B6 1507 aa20.84■□□□□ 0.93
SIRPB1-204ENST00000381603 SHROOM4Q9ULL8 1493 aa20.66■□□□□ 0.9
SIRPB1-204ENST00000381603 ABCC9O60706 1549 aa20.6■□□□□ 0.89
SIRPB1-204ENST00000381603 MYO15BQ96JP2 1530 aa20.55■□□□□ 0.88
SIRPB1-204ENST00000381603 NACADO15069 1562 aa20.39■□□□□ 0.85
SIRPB1-204ENST00000381603 RB1CC1Q8TDY2 1594 aa20.19■□□□□ 0.82
SIRPB1-204ENST00000381603 SCRIBQ14160 1630 aa20.15■□□□□ 0.82
SIRPB1-204ENST00000381603 SUPT5HO00267 1087 aaKnown RBP19.99■□□□□ 0.79
SIRPB1-204ENST00000381603 UNC13AQ9UPW8 1703 aa19.69■□□□□ 0.74
SIRPB1-204ENST00000381603 RSF1Q96T23 1441 aaPredicted RBP19.58■□□□□ 0.73
SIRPB1-204ENST00000381603 CECR2Q9BXF3 1484 aa19.52■□□□□ 0.72
SIRPB1-204ENST00000381603 BICRAQ9NZM4 1560 aa19.49■□□□□ 0.71
SIRPB1-204ENST00000381603 BAZ1AQ9NRL2 1556 aaPredicted RBP19.47■□□□□ 0.71
SIRPB1-204ENST00000381603 PABPN1Q86U42 306 aaKnown RBP eCLIP19.45■□□□□ 0.7
SIRPB1-204ENST00000381603 MROH2BQ7Z745 1585 aa19.43■□□□□ 0.7
SIRPB1-204ENST00000381603 SMARCA4P51532 1647 aa19.32■□□□□ 0.68
SIRPB1-204ENST00000381603 WIZO95785 1651 aa19.29■□□□□ 0.68
SIRPB1-204ENST00000381603 HRCP23327 699 aa19.22■□□□□ 0.67
SIRPB1-204ENST00000381603 CHIC1Q5VXU3 224 aa19.17■□□□□ 0.66
SIRPB1-204ENST00000381603 TOP2AP11388 1531 aaKnown RBP19.13■□□□□ 0.65
SIRPB1-204ENST00000381603 PEG3Q9GZU2 1588 aa19.08■□□□□ 0.65
SIRPB1-204ENST00000381603 SMARCA2P51531 1590 aa19.02■□□□□ 0.63
SIRPB1-204ENST00000381603 ATAD2BQ9ULI0 1458 aa18.98■□□□□ 0.63
SIRPB1-204ENST00000381603 EIF4G1Q04637 1599 aaKnown RBP18.95■□□□□ 0.62
SIRPB1-204ENST00000381603 BAZ1BQ9UIG0 1483 aaKnown RBP18.92■□□□□ 0.62
SIRPB1-204ENST00000381603 CCDC88BA6NC98 1476 aa18.92■□□□□ 0.62
SIRPB1-204ENST00000381603 TRIM41Q8WV44 630 aa18.82■□□□□ 0.6
SIRPB1-204ENST00000381603 NCAPD3P42695 1498 aa18.81■□□□□ 0.6
SIRPB1-204ENST00000381603 HMGXB3Q12766 1538 aa18.8■□□□□ 0.6
SIRPB1-204ENST00000381603 PCGF6Q9BYE7 350 aa18.7■□□□□ 0.58
SIRPB1-204ENST00000381603 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
SIRPB1-204ENST00000381603 PELP1Q8IZL8 1130 aaKnown RBP18.55■□□□□ 0.56
SIRPB1-204ENST00000381603 ABCC8Q09428 1581 aa18.55■□□□□ 0.56
SIRPB1-204ENST00000381603 WRNQ14191 1432 aaPredicted RBP eCLIP18.47■□□□□ 0.55
SIRPB1-204ENST00000381603 TRIM26Q12899 539 aaPredicted RBP18.46■□□□□ 0.55
SIRPB1-204ENST00000381603 ZEB1P37275 1124 aaPredicted RBP18.46■□□□□ 0.55
SIRPB1-204ENST00000381603 PPARGC1BQ86YN6 1023 aaKnown RBP18.43■□□□□ 0.54
SIRPB1-204ENST00000381603 FAM9AQ8IZU1 332 aaPredicted RBP18.43■□□□□ 0.54
SIRPB1-204ENST00000381603 CFTRP13569 1480 aa18.43■□□□□ 0.54
SIRPB1-204ENST00000381603 LOC105371045A0A1W2PR82 267 aa18.42■□□□□ 0.54
SIRPB1-204ENST00000381603 CADPSQ9ULU8 1353 aa18.35■□□□□ 0.53
SIRPB1-204ENST00000381603 SYNJ1O43426 1573 aa18.33■□□□□ 0.52
SIRPB1-204ENST00000381603 EEA1Q15075 1411 aa18.33■□□□□ 0.52
SIRPB1-204ENST00000381603 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
SIRPB1-204ENST00000381603 TOP2BQ02880 1626 aa18.28■□□□□ 0.52
SIRPB1-204ENST00000381603 SOGA1O94964 1423 aa18.25■□□□□ 0.51
SIRPB1-204ENST00000381603 BIVM-ERCC5R4GMW8 1640 aa18.24■□□□□ 0.51
SIRPB1-204ENST00000381603 CSRNP3Q8WYN3 585 aa18.19■□□□□ 0.5
SIRPB1-204ENST00000381603 CUX1P39880 1505 aa18.17■□□□□ 0.5
SIRPB1-204ENST00000381603 EHMT2Q96KQ7 1210 aa18.16■□□□□ 0.5
SIRPB1-204ENST00000381603 LAMC3Q9Y6N6 1575 aa18.16■□□□□ 0.5
SIRPB1-204ENST00000381603 FANCD2Q9BXW9 1451 aa18.15■□□□□ 0.5
SIRPB1-204ENST00000381603 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
SIRPB1-204ENST00000381603 NESP48681 1621 aa18.09■□□□□ 0.49
SIRPB1-204ENST00000381603 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
SIRPB1-204ENST00000381603 GOLGA3Q08378 1498 aa18.06■□□□□ 0.48
SIRPB1-204ENST00000381603 CEP164Q9UPV0 1460 aa18.05■□□□□ 0.48
SIRPB1-204ENST00000381603 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
SIRPB1-204ENST00000381603 KIF27Q86VH2 1401 aa18.02■□□□□ 0.48
SIRPB1-204ENST00000381603 KIF21BO75037 1637 aa18.02■□□□□ 0.48
SIRPB1-204ENST00000381603 TNIKQ9UKE5 1360 aa18.01■□□□□ 0.47
SIRPB1-204ENST00000381603 UBTFP17480 764 aaKnown RBP18.01■□□□□ 0.47
SIRPB1-204ENST00000381603 DNMBPQ6XZF7 1577 aa18■□□□□ 0.47
SIRPB1-204ENST00000381603 FGD5Q6ZNL6 1462 aa17.98■□□□□ 0.47
SIRPB1-204ENST00000381603 TOPBP1Q92547 1522 aa17.95■□□□□ 0.46
SIRPB1-204ENST00000381603 CEP162Q5TB80 1403 aa17.92■□□□□ 0.46
SIRPB1-204ENST00000381603 MYT1Q01538 1121 aa17.91■□□□□ 0.46
SIRPB1-204ENST00000381603 CUX2O14529 1486 aa17.91■□□□□ 0.46
SIRPB1-204ENST00000381603 ERICH3Q5RHP9 1530 aa17.89■□□□□ 0.45
SIRPB1-204ENST00000381603 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
SIRPB1-204ENST00000381603 PRXQ9BXM0 1461 aa17.88■□□□□ 0.45
SIRPB1-204ENST00000381603 KIF21AQ7Z4S6 1674 aa17.87■□□□□ 0.45
SIRPB1-204ENST00000381603 POLA1P09884 1462 aaPredicted RBP17.87■□□□□ 0.45
SIRPB1-204ENST00000381603 RAPGEF2Q9Y4G8 1499 aa17.87■□□□□ 0.45
SIRPB1-204ENST00000381603 URB2Q14146 1524 aaKnown RBP17.87■□□□□ 0.45
SIRPB1-204ENST00000381603 ABCA10Q8WWZ4 1543 aa17.83■□□□□ 0.44
SIRPB1-204ENST00000381603 RAD54L2Q9Y4B4 1467 aa17.8■□□□□ 0.44
SIRPB1-204ENST00000381603 IGF1RP08069 1367 aa17.79■□□□□ 0.44
SIRPB1-204ENST00000381603 MRC2Q9UBG0 1479 aa17.78■□□□□ 0.44
SIRPB1-204ENST00000381603 CLIP1P30622 1438 aa17.76■□□□□ 0.43
SIRPB1-204ENST00000381603 CARMIL1Q5VZK9 1371 aa17.74■□□□□ 0.43
SIRPB1-204ENST00000381603 WDR97A6NE52 1622 aa17.71■□□□□ 0.43
SIRPB1-204ENST00000381603 ERCC6Q03468 1493 aa17.71■□□□□ 0.43
SIRPB1-204ENST00000381603 ACIN1Q9UKV3 1341 aaKnown RBP17.69■□□□□ 0.42
SIRPB1-204ENST00000381603 CUL7Q14999 1698 aa17.67■□□□□ 0.42
SIRPB1-204ENST00000381603 WDR62O43379 1518 aa17.66■□□□□ 0.42
SIRPB1-204ENST00000381603 GAPVD1Q14C86 1478 aa17.65■□□□□ 0.42
SIRPB1-204ENST00000381603 RANGAP1P46060 587 aaPredicted RBP17.64■□□□□ 0.41
SIRPB1-204ENST00000381603 TDRD9Q8NDG6 1382 aaKnown RBP17.64■□□□□ 0.41
SIRPB1-204ENST00000381603 ABCA5Q8WWZ7 1642 aa17.64■□□□□ 0.41
SIRPB1-204ENST00000381603 TARBP1Q13395 1621 aaKnown RBP17.64■□□□□ 0.41
SIRPB1-204ENST00000381603 CENPBP07199 599 aaPredicted RBP17.63■□□□□ 0.41
SIRPB1-204ENST00000381603 VPS8Q8N3P4 1428 aa17.62■□□□□ 0.41
SIRPB1-204ENST00000381603 IFT140Q96RY7 1462 aa17.6■□□□□ 0.41
SIRPB1-204ENST00000381603 APLP2Q06481 763 aa17.57■□□□□ 0.4
SIRPB1-204ENST00000381603 THOC2Q8NI27 1593 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms