RNA–Protein interactions for RNA: ENST00000380849.6

TTC39A-205, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-205ENST00000380849 NISCHQ9Y2I1 1504 aa33.46■■■□□ 2.95
TTC39A-205ENST00000380849 CCDC180Q9P1Z9 1646 aa29.7■■■□□ 2.34
TTC39A-205ENST00000380849 ABCC9O60706 1549 aa28.64■■■□□ 2.17
TTC39A-205ENST00000380849 ZCCHC6Q5VYS8 1495 aaKnown RBP27.91■■■□□ 2.06
TTC39A-205ENST00000380849 NACADO15069 1562 aa27.88■■■□□ 2.05
TTC39A-205ENST00000380849 MYO15BQ96JP2 1530 aa27.87■■■□□ 2.05
TTC39A-205ENST00000380849 RB1CC1Q8TDY2 1594 aa27.82■■■□□ 2.04
TTC39A-205ENST00000380849 DCAF1Q9Y4B6 1507 aa27.8■■■□□ 2.04
TTC39A-205ENST00000380849 DCAF8L2P0C7V8 631 aa27.78■■■□□ 2.04
TTC39A-205ENST00000380849 UNC13AQ9UPW8 1703 aa27.06■■□□□ 1.92
TTC39A-205ENST00000380849 SCRIBQ14160 1630 aa26.96■■□□□ 1.91
TTC39A-205ENST00000380849 BICRAQ9NZM4 1560 aa26.84■■□□□ 1.89
TTC39A-205ENST00000380849 SHROOM4Q9ULL8 1493 aa26.82■■□□□ 1.88
TTC39A-205ENST00000380849 PABPN1Q86U42 306 aaKnown RBP eCLIP26.78■■□□□ 1.88
TTC39A-205ENST00000380849 EIF4G1Q04637 1599 aaKnown RBP26.16■■□□□ 1.78
TTC39A-205ENST00000380849 CC2D2AQ9P2K1 1620 aa25.96■■□□□ 1.75
TTC39A-205ENST00000380849 BAZ1AQ9NRL2 1556 aaPredicted RBP25.96■■□□□ 1.75
TTC39A-205ENST00000380849 DNAJC5BQ9UF47 199 aa25.96■■□□□ 1.75
TTC39A-205ENST00000380849 CECR2Q9BXF3 1484 aa25.92■■□□□ 1.74
TTC39A-205ENST00000380849 SMARCA4P51532 1647 aa25.88■■□□□ 1.73
TTC39A-205ENST00000380849 SMARCA2P51531 1590 aa25.75■■□□□ 1.71
TTC39A-205ENST00000380849 MROH2BQ7Z745 1585 aa25.71■■□□□ 1.71
TTC39A-205ENST00000380849 PEG3Q9GZU2 1588 aa25.69■■□□□ 1.7
TTC39A-205ENST00000380849 NCAPD3P42695 1498 aa25.69■■□□□ 1.7
TTC39A-205ENST00000380849 ATAD2BQ9ULI0 1458 aa25.68■■□□□ 1.7
TTC39A-205ENST00000380849 HMGXB3Q12766 1538 aa25.59■■□□□ 1.69
TTC39A-205ENST00000380849 RSF1Q96T23 1441 aaPredicted RBP25.56■■□□□ 1.68
TTC39A-205ENST00000380849 BAZ1BQ9UIG0 1483 aaKnown RBP25.51■■□□□ 1.67
TTC39A-205ENST00000380849 WIZO95785 1651 aa25.44■■□□□ 1.66
TTC39A-205ENST00000380849 TOP2AP11388 1531 aaKnown RBP25.27■■□□□ 1.64
TTC39A-205ENST00000380849 SUPT5HO00267 1087 aaKnown RBP25.06■■□□□ 1.6
TTC39A-205ENST00000380849 LAMC3Q9Y6N6 1575 aa24.99■■□□□ 1.59
TTC39A-205ENST00000380849 CADPSQ9ULU8 1353 aa24.94■■□□□ 1.58
TTC39A-205ENST00000380849 CCDC88BA6NC98 1476 aa24.93■■□□□ 1.58
TTC39A-205ENST00000380849 CFTRP13569 1480 aa24.84■■□□□ 1.57
TTC39A-205ENST00000380849 PDS5BQ9NTI5 1447 aa24.83■■□□□ 1.57
TTC39A-205ENST00000380849 NESP48681 1621 aa24.82■■□□□ 1.56
TTC39A-205ENST00000380849 ERCC6Q03468 1493 aa24.76■■□□□ 1.55
TTC39A-205ENST00000380849 PRDM2Q13029 1718 aa24.69■■□□□ 1.54
TTC39A-205ENST00000380849 FANCD2Q9BXW9 1451 aa24.62■■□□□ 1.53
TTC39A-205ENST00000380849 CEP164Q9UPV0 1460 aa24.59■■□□□ 1.53
TTC39A-205ENST00000380849 KIF21AQ7Z4S6 1674 aa24.59■■□□□ 1.53
TTC39A-205ENST00000380849 MRC2Q9UBG0 1479 aa24.49■■□□□ 1.51
TTC39A-205ENST00000380849 CUX2O14529 1486 aa24.46■■□□□ 1.51
TTC39A-205ENST00000380849 THOC2Q8NI27 1593 aaKnown RBP24.46■■□□□ 1.51
TTC39A-205ENST00000380849 ABCC8Q09428 1581 aa24.42■■□□□ 1.5
TTC39A-205ENST00000380849 WDR62O43379 1518 aa24.4■■□□□ 1.5
TTC39A-205ENST00000380849 URB2Q14146 1524 aaKnown RBP24.3■■□□□ 1.48
TTC39A-205ENST00000380849 DNMBPQ6XZF7 1577 aa24.27■■□□□ 1.48
TTC39A-205ENST00000380849 TOPBP1Q92547 1522 aa24.24■■□□□ 1.47
TTC39A-205ENST00000380849 WRNQ14191 1432 aaPredicted RBP eCLIP24.13■■□□□ 1.45
TTC39A-205ENST00000380849 CUX1P39880 1505 aa24.11■■□□□ 1.45
TTC39A-205ENST00000380849 IFT140Q96RY7 1462 aa24.09■■□□□ 1.45
TTC39A-205ENST00000380849 TOP2BQ02880 1626 aa24.06■■□□□ 1.44
TTC39A-205ENST00000380849 BIVM-ERCC5R4GMW8 1640 aa24.05■■□□□ 1.44
TTC39A-205ENST00000380849 POLA1P09884 1462 aaPredicted RBP24.05■■□□□ 1.44
TTC39A-205ENST00000380849 FGD5Q6ZNL6 1462 aa24.02■■□□□ 1.44
TTC39A-205ENST00000380849 SOGA1O94964 1423 aa23.99■■□□□ 1.43
TTC39A-205ENST00000380849 SYNJ1O43426 1573 aa23.96■■□□□ 1.43
TTC39A-205ENST00000380849 WDR97A6NE52 1622 aa23.95■■□□□ 1.42
TTC39A-205ENST00000380849 TARBP1Q13395 1621 aaKnown RBP23.95■■□□□ 1.42
TTC39A-205ENST00000380849 RAD54L2Q9Y4B4 1467 aa23.87■■□□□ 1.41
TTC39A-205ENST00000380849 ABCA10Q8WWZ4 1543 aa23.85■■□□□ 1.41
TTC39A-205ENST00000380849 ZNF608Q9ULD9 1512 aaPredicted RBP23.81■■□□□ 1.4
TTC39A-205ENST00000380849 EIF4G3O43432 1585 aaKnown RBP23.78■■□□□ 1.4
TTC39A-205ENST00000380849 TRIM41Q8WV44 630 aa23.76■■□□□ 1.39
TTC39A-205ENST00000380849 TDRD9Q8NDG6 1382 aaKnown RBP23.76■■□□□ 1.39
TTC39A-205ENST00000380849 AQRO60306 1485 aaKnown RBP eCLIP23.75■■□□□ 1.39
TTC39A-205ENST00000380849 GAPVD1Q14C86 1478 aa23.73■■□□□ 1.39
TTC39A-205ENST00000380849 GRIN2BQ13224 1484 aa23.7■■□□□ 1.38
TTC39A-205ENST00000380849 ABCA5Q8WWZ7 1642 aa23.7■■□□□ 1.38
TTC39A-205ENST00000380849 KIF27Q86VH2 1401 aa23.66■■□□□ 1.38
TTC39A-205ENST00000380849 MAGI1Q96QZ7 1491 aaPredicted RBP23.64■■□□□ 1.38
TTC39A-205ENST00000380849 ERICH3Q5RHP9 1530 aa23.62■■□□□ 1.37
TTC39A-205ENST00000380849 PBRM1Q86U86 1689 aa23.61■■□□□ 1.37
TTC39A-205ENST00000380849 CHIC1Q5VXU3 224 aa23.57■■□□□ 1.36
TTC39A-205ENST00000380849 SNAPC4Q5SXM2 1469 aa23.56■■□□□ 1.36
TTC39A-205ENST00000380849 SYNJ2O15056 1496 aa23.52■■□□□ 1.36
TTC39A-205ENST00000380849 OSCARQ8IYS5 282 aa23.5■■□□□ 1.35
TTC39A-205ENST00000380849 CHMP7Q8WUX9 453 aaPredicted RBP23.5■■□□□ 1.35
TTC39A-205ENST00000380849 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
TTC39A-205ENST00000380849 IGF1RP08069 1367 aa23.46■■□□□ 1.35
TTC39A-205ENST00000380849 CUL7Q14999 1698 aa23.45■■□□□ 1.34
TTC39A-205ENST00000380849 EEA1Q15075 1411 aa23.45■■□□□ 1.34
TTC39A-205ENST00000380849 ADAMTS12P58397 1594 aa23.44■■□□□ 1.34
TTC39A-205ENST00000380849 FBLN2P98095 1184 aa23.44■■□□□ 1.34
TTC39A-205ENST00000380849 CHD1O14646 1710 aa23.42■■□□□ 1.34
TTC39A-205ENST00000380849 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
TTC39A-205ENST00000380849 CARMIL1Q5VZK9 1371 aa23.36■■□□□ 1.33
TTC39A-205ENST00000380849 DNAJC5Q9H3Z4 198 aa23.34■■□□□ 1.33
TTC39A-205ENST00000380849 RUSC2Q8N2Y8 1516 aa23.33■■□□□ 1.32
TTC39A-205ENST00000380849 CSRNP3Q8WYN3 585 aa23.29■■□□□ 1.32
TTC39A-205ENST00000380849 NUP160Q12769 1436 aa23.26■■□□□ 1.31
TTC39A-205ENST00000380849 RAPGEF2Q9Y4G8 1499 aa23.26■■□□□ 1.31
TTC39A-205ENST00000380849 PRXQ9BXM0 1461 aa23.22■■□□□ 1.31
TTC39A-205ENST00000380849 CLASP1Q7Z460 1538 aa23.21■■□□□ 1.31
TTC39A-205ENST00000380849 CEP170Q5SW79 1584 aa23.18■■□□□ 1.3
TTC39A-205ENST00000380849 KIAA0586Q9BVV6 1533 aa23.14■■□□□ 1.3
TTC39A-205ENST00000380849 FAM9AQ8IZU1 332 aaPredicted RBP23.11■■□□□ 1.29
TTC39A-205ENST00000380849 KIF21BO75037 1637 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms