RNA–Protein interactions for RNA: ENST00000376310.7

PRICKLE3-201, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 2

Gene PRICKLE3, Length 806 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-201ENST00000376310 NISCHQ9Y2I1 1504 aa34.09■■■■□ 3.05
PRICKLE3-201ENST00000376310 CCDC180Q9P1Z9 1646 aa30.23■■■□□ 2.43
PRICKLE3-201ENST00000376310 ABCC9O60706 1549 aa29.38■■■□□ 2.29
PRICKLE3-201ENST00000376310 DCAF8L2P0C7V8 631 aa28.46■■■□□ 2.15
PRICKLE3-201ENST00000376310 ZCCHC6Q5VYS8 1495 aaKnown RBP28.41■■■□□ 2.14
PRICKLE3-201ENST00000376310 NACADO15069 1562 aa28.39■■■□□ 2.14
PRICKLE3-201ENST00000376310 RB1CC1Q8TDY2 1594 aa28.39■■■□□ 2.14
PRICKLE3-201ENST00000376310 MYO15BQ96JP2 1530 aa28.28■■■□□ 2.12
PRICKLE3-201ENST00000376310 DCAF1Q9Y4B6 1507 aa28.23■■■□□ 2.11
PRICKLE3-201ENST00000376310 UNC13AQ9UPW8 1703 aa27.69■■■□□ 2.02
PRICKLE3-201ENST00000376310 SCRIBQ14160 1630 aa27.58■■■□□ 2.01
PRICKLE3-201ENST00000376310 PABPN1Q86U42 306 aaKnown RBP eCLIP27.5■■□□□ 1.99
PRICKLE3-201ENST00000376310 BICRAQ9NZM4 1560 aa27.46■■□□□ 1.99
PRICKLE3-201ENST00000376310 SHROOM4Q9ULL8 1493 aa27.25■■□□□ 1.95
PRICKLE3-201ENST00000376310 DNAJC5BQ9UF47 199 aa26.77■■□□□ 1.88
PRICKLE3-201ENST00000376310 EIF4G1Q04637 1599 aaKnown RBP26.75■■□□□ 1.87
PRICKLE3-201ENST00000376310 CC2D2AQ9P2K1 1620 aa26.59■■□□□ 1.85
PRICKLE3-201ENST00000376310 CECR2Q9BXF3 1484 aa26.5■■□□□ 1.83
PRICKLE3-201ENST00000376310 BAZ1AQ9NRL2 1556 aaPredicted RBP26.43■■□□□ 1.82
PRICKLE3-201ENST00000376310 SMARCA4P51532 1647 aa26.4■■□□□ 1.82
PRICKLE3-201ENST00000376310 MROH2BQ7Z745 1585 aa26.25■■□□□ 1.79
PRICKLE3-201ENST00000376310 SMARCA2P51531 1590 aa26.22■■□□□ 1.79
PRICKLE3-201ENST00000376310 ATAD2BQ9ULI0 1458 aa26.21■■□□□ 1.79
PRICKLE3-201ENST00000376310 NCAPD3P42695 1498 aa26.18■■□□□ 1.78
PRICKLE3-201ENST00000376310 PEG3Q9GZU2 1588 aa26.14■■□□□ 1.78
PRICKLE3-201ENST00000376310 HMGXB3Q12766 1538 aa26.07■■□□□ 1.76
PRICKLE3-201ENST00000376310 RSF1Q96T23 1441 aaPredicted RBP26.03■■□□□ 1.76
PRICKLE3-201ENST00000376310 BAZ1BQ9UIG0 1483 aaKnown RBP26.03■■□□□ 1.76
PRICKLE3-201ENST00000376310 WIZO95785 1651 aa25.99■■□□□ 1.75
PRICKLE3-201ENST00000376310 TOP2AP11388 1531 aaKnown RBP25.73■■□□□ 1.71
PRICKLE3-201ENST00000376310 SUPT5HO00267 1087 aaKnown RBP25.56■■□□□ 1.68
PRICKLE3-201ENST00000376310 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
PRICKLE3-201ENST00000376310 NESP48681 1621 aa25.46■■□□□ 1.67
PRICKLE3-201ENST00000376310 CADPSQ9ULU8 1353 aa25.44■■□□□ 1.66
PRICKLE3-201ENST00000376310 CCDC88BA6NC98 1476 aa25.43■■□□□ 1.66
PRICKLE3-201ENST00000376310 ERCC6Q03468 1493 aa25.35■■□□□ 1.65
PRICKLE3-201ENST00000376310 PDS5BQ9NTI5 1447 aa25.32■■□□□ 1.64
PRICKLE3-201ENST00000376310 CFTRP13569 1480 aa25.32■■□□□ 1.64
PRICKLE3-201ENST00000376310 KIF21AQ7Z4S6 1674 aa25.18■■□□□ 1.62
PRICKLE3-201ENST00000376310 PRDM2Q13029 1718 aa25.14■■□□□ 1.61
PRICKLE3-201ENST00000376310 FANCD2Q9BXW9 1451 aa25.14■■□□□ 1.61
PRICKLE3-201ENST00000376310 CEP164Q9UPV0 1460 aa25.1■■□□□ 1.61
PRICKLE3-201ENST00000376310 THOC2Q8NI27 1593 aaKnown RBP25.04■■□□□ 1.6
PRICKLE3-201ENST00000376310 MRC2Q9UBG0 1479 aa25.02■■□□□ 1.6
PRICKLE3-201ENST00000376310 CUX2O14529 1486 aa25.02■■□□□ 1.6
PRICKLE3-201ENST00000376310 WDR62O43379 1518 aa24.91■■□□□ 1.58
PRICKLE3-201ENST00000376310 URB2Q14146 1524 aaKnown RBP24.85■■□□□ 1.57
PRICKLE3-201ENST00000376310 ABCC8Q09428 1581 aa24.82■■□□□ 1.56
PRICKLE3-201ENST00000376310 TOPBP1Q92547 1522 aa24.75■■□□□ 1.55
PRICKLE3-201ENST00000376310 DNMBPQ6XZF7 1577 aa24.75■■□□□ 1.55
PRICKLE3-201ENST00000376310 CUX1P39880 1505 aa24.61■■□□□ 1.53
PRICKLE3-201ENST00000376310 IFT140Q96RY7 1462 aa24.58■■□□□ 1.52
PRICKLE3-201ENST00000376310 WRNQ14191 1432 aaPredicted RBP eCLIP24.57■■□□□ 1.52
PRICKLE3-201ENST00000376310 POLA1P09884 1462 aaPredicted RBP24.54■■□□□ 1.52
PRICKLE3-201ENST00000376310 FGD5Q6ZNL6 1462 aa24.52■■□□□ 1.52
PRICKLE3-201ENST00000376310 SOGA1O94964 1423 aa24.49■■□□□ 1.51
PRICKLE3-201ENST00000376310 TOP2BQ02880 1626 aa24.48■■□□□ 1.51
PRICKLE3-201ENST00000376310 BIVM-ERCC5R4GMW8 1640 aa24.47■■□□□ 1.51
PRICKLE3-201ENST00000376310 TARBP1Q13395 1621 aaKnown RBP24.46■■□□□ 1.51
PRICKLE3-201ENST00000376310 SYNJ1O43426 1573 aa24.45■■□□□ 1.5
PRICKLE3-201ENST00000376310 RAD54L2Q9Y4B4 1467 aa24.44■■□□□ 1.5
PRICKLE3-201ENST00000376310 ZNF608Q9ULD9 1512 aaPredicted RBP24.4■■□□□ 1.5
PRICKLE3-201ENST00000376310 EIF4G3O43432 1585 aaKnown RBP24.33■■□□□ 1.48
PRICKLE3-201ENST00000376310 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
PRICKLE3-201ENST00000376310 AQRO60306 1485 aaKnown RBP eCLIP24.31■■□□□ 1.481e-6■■■■□ 24.8
PRICKLE3-201ENST00000376310 TDRD9Q8NDG6 1382 aaKnown RBP24.3■■□□□ 1.48
PRICKLE3-201ENST00000376310 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
PRICKLE3-201ENST00000376310 GAPVD1Q14C86 1478 aa24.19■■□□□ 1.46
PRICKLE3-201ENST00000376310 GRIN2BQ13224 1484 aa24.18■■□□□ 1.46
PRICKLE3-201ENST00000376310 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
PRICKLE3-201ENST00000376310 TRIM41Q8WV44 630 aa24.16■■□□□ 1.46
PRICKLE3-201ENST00000376310 PBRM1Q86U86 1689 aa24.12■■□□□ 1.45
PRICKLE3-201ENST00000376310 SNAPC4Q5SXM2 1469 aa24.09■■□□□ 1.45
PRICKLE3-201ENST00000376310 MAGI1Q96QZ7 1491 aaPredicted RBP24.08■■□□□ 1.45
PRICKLE3-201ENST00000376310 KIF27Q86VH2 1401 aa24.06■■□□□ 1.44
PRICKLE3-201ENST00000376310 OSCARQ8IYS5 282 aa24.05■■□□□ 1.44
PRICKLE3-201ENST00000376310 FBLN2P98095 1184 aa24.03■■□□□ 1.44
PRICKLE3-201ENST00000376310 DNAJC5Q9H3Z4 198 aa24.03■■□□□ 1.44
PRICKLE3-201ENST00000376310 ERICH3Q5RHP9 1530 aa24.03■■□□□ 1.44
PRICKLE3-201ENST00000376310 CHMP7Q8WUX9 453 aaPredicted RBP24.01■■□□□ 1.43
PRICKLE3-201ENST00000376310 SYNJ2O15056 1496 aa23.99■■□□□ 1.43
PRICKLE3-201ENST00000376310 CHD1O14646 1710 aa23.98■■□□□ 1.43
PRICKLE3-201ENST00000376310 CHIC1Q5VXU3 224 aa23.94■■□□□ 1.42
PRICKLE3-201ENST00000376310 FHAD1B1AJZ9 1412 aa23.93■■□□□ 1.42
PRICKLE3-201ENST00000376310 ADAMTS12P58397 1594 aa23.92■■□□□ 1.42
PRICKLE3-201ENST00000376310 IGF1RP08069 1367 aa23.91■■□□□ 1.42
PRICKLE3-201ENST00000376310 CUL7Q14999 1698 aa23.86■■□□□ 1.41
PRICKLE3-201ENST00000376310 GRIN2AQ12879 1464 aa23.84■■□□□ 1.41
PRICKLE3-201ENST00000376310 RUSC2Q8N2Y8 1516 aa23.84■■□□□ 1.41
PRICKLE3-201ENST00000376310 CARMIL1Q5VZK9 1371 aa23.79■■□□□ 1.4
PRICKLE3-201ENST00000376310 EEA1Q15075 1411 aa23.74■■□□□ 1.39
PRICKLE3-201ENST00000376310 CLASP1Q7Z460 1538 aa23.73■■□□□ 1.39
PRICKLE3-201ENST00000376310 NUP160Q12769 1436 aa23.72■■□□□ 1.39
PRICKLE3-201ENST00000376310 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
PRICKLE3-201ENST00000376310 CSRNP3Q8WYN3 585 aa23.68■■□□□ 1.38
PRICKLE3-201ENST00000376310 RAPGEF2Q9Y4G8 1499 aa23.68■■□□□ 1.38
PRICKLE3-201ENST00000376310 FAM9AQ8IZU1 332 aaPredicted RBP23.62■■□□□ 1.37
PRICKLE3-201ENST00000376310 PRXQ9BXM0 1461 aa23.6■■□□□ 1.37
PRICKLE3-201ENST00000376310 ARHGEF11O15085 1522 aa23.59■■□□□ 1.37
PRICKLE3-201ENST00000376310 RIMBP3CA6NJZ7 1639 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms