RNA–Protein interactions for RNA: ENST00000376092.7

LST1-207, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-207ENST00000376092 NISCHQ9Y2I1 1504 aa11.22□□□□□ -0.61
LST1-207ENST00000376092 AEBP2Q6ZN18 517 aaPredicted RBP10.42□□□□□ -0.74
LST1-207ENST00000376092 CHIC1Q5VXU3 224 aa10.15□□□□□ -0.78
LST1-207ENST00000376092 CCDC180Q9P1Z9 1646 aa9.7□□□□□ -0.86
LST1-207ENST00000376092 ZCCHC6Q5VYS8 1495 aaKnown RBP9.51□□□□□ -0.89
LST1-207ENST00000376092 SHROOM4Q9ULL8 1493 aa9.38□□□□□ -0.91
LST1-207ENST00000376092 DCAF1Q9Y4B6 1507 aa9.27□□□□□ -0.93
LST1-207ENST00000376092 SUPT5HO00267 1087 aaKnown RBP9.11□□□□□ -0.95
LST1-207ENST00000376092 DCAF8L2P0C7V8 631 aa9.1□□□□□ -0.95
LST1-207ENST00000376092 MYO15BQ96JP2 1530 aa9.03□□□□□ -0.96
LST1-207ENST00000376092 ABCC9O60706 1549 aa9□□□□□ -0.97
LST1-207ENST00000376092 SCRIBQ14160 1630 aa8.98□□□□□ -0.97
LST1-207ENST00000376092 PHF23Q9BUL5 403 aaPredicted RBP8.91□□□□□ -0.98
LST1-207ENST00000376092 NACADO15069 1562 aa8.9□□□□□ -0.98
LST1-207ENST00000376092 SENP3Q9H4L4 574 aaPredicted RBP8.88□□□□□ -0.99
LST1-207ENST00000376092 RSF1Q96T23 1441 aaPredicted RBP8.81□□□□□ -1
LST1-207ENST00000376092 RB1CC1Q8TDY2 1594 aa8.78□□□□□ -1
LST1-207ENST00000376092 CECR2Q9BXF3 1484 aa8.71□□□□□ -1.01
LST1-207ENST00000376092 MROH2BQ7Z745 1585 aa8.71□□□□□ -1.02
LST1-207ENST00000376092 UNC13AQ9UPW8 1703 aa8.71□□□□□ -1.02
LST1-207ENST00000376092 BAZ1AQ9NRL2 1556 aaPredicted RBP8.68□□□□□ -1.02
LST1-207ENST00000376092 WIZO95785 1651 aa8.68□□□□□ -1.02
LST1-207ENST00000376092 EIF4G1Q04637 1599 aaKnown RBP8.62□□□□□ -1.03
LST1-207ENST00000376092 SMARCA4P51532 1647 aa8.61□□□□□ -1.03
LST1-207ENST00000376092 TOP2AP11388 1531 aaKnown RBP8.58□□□□□ -1.04
LST1-207ENST00000376092 BICRAQ9NZM4 1560 aa8.54□□□□□ -1.04
LST1-207ENST00000376092 LOC105371045A0A1W2PR82 267 aa8.54□□□□□ -1.04
LST1-207ENST00000376092 SMARCA2P51531 1590 aa8.52□□□□□ -1.04
LST1-207ENST00000376092 TRIM41Q8WV44 630 aa8.52□□□□□ -1.05
LST1-207ENST00000376092 HRCP23327 699 aa8.48□□□□□ -1.05
LST1-207ENST00000376092 CCDC88BA6NC98 1476 aa8.46□□□□□ -1.05
LST1-207ENST00000376092 PCGF6Q9BYE7 350 aa8.46□□□□□ -1.06
LST1-207ENST00000376092 PEG3Q9GZU2 1588 aa8.46□□□□□ -1.06
LST1-207ENST00000376092 ABCC8Q09428 1581 aa8.43□□□□□ -1.06
LST1-207ENST00000376092 FAM9AQ8IZU1 332 aaPredicted RBP8.41□□□□□ -1.06
LST1-207ENST00000376092 PABPN1Q86U42 306 aaKnown RBP eCLIP8.39□□□□□ -1.07
LST1-207ENST00000376092 TRIM26Q12899 539 aaPredicted RBP8.37□□□□□ -1.07
LST1-207ENST00000376092 ATAD2BQ9ULI0 1458 aa8.34□□□□□ -1.07
LST1-207ENST00000376092 BAZ1BQ9UIG0 1483 aaKnown RBP8.32□□□□□ -1.08
LST1-207ENST00000376092 EHMT2Q96KQ7 1210 aa8.31□□□□□ -1.08
LST1-207ENST00000376092 SYNJ1O43426 1573 aa8.31□□□□□ -1.08
LST1-207ENST00000376092 EEA1Q15075 1411 aa8.3□□□□□ -1.08
LST1-207ENST00000376092 SOGA1O94964 1423 aa8.29□□□□□ -1.08
LST1-207ENST00000376092 WRNQ14191 1432 aaPredicted RBP eCLIP8.29□□□□□ -1.08
LST1-207ENST00000376092 PPARGC1BQ86YN6 1023 aaKnown RBP8.28□□□□□ -1.08
LST1-207ENST00000376092 RUSC2Q8N2Y8 1516 aa8.26□□□□□ -1.09
LST1-207ENST00000376092 HMGXB3Q12766 1538 aa8.25□□□□□ -1.09
LST1-207ENST00000376092 KIF21BO75037 1637 aa8.25□□□□□ -1.09
LST1-207ENST00000376092 CEP162Q5TB80 1403 aa8.24□□□□□ -1.09
LST1-207ENST00000376092 BIVM-ERCC5R4GMW8 1640 aa8.24□□□□□ -1.09
LST1-207ENST00000376092 GOLGA3Q08378 1498 aa8.24□□□□□ -1.09
LST1-207ENST00000376092 TNIKQ9UKE5 1360 aa8.23□□□□□ -1.09
LST1-207ENST00000376092 FOXD1Q16676 465 aa8.23□□□□□ -1.09
LST1-207ENST00000376092 PLPPR3Q6T4P5 718 aa8.23□□□□□ -1.09
LST1-207ENST00000376092 TOP2BQ02880 1626 aa8.21□□□□□ -1.09
LST1-207ENST00000376092 NCAPD3P42695 1498 aa8.19□□□□□ -1.1
LST1-207ENST00000376092 CSRNP3Q8WYN3 585 aa8.19□□□□□ -1.1
LST1-207ENST00000376092 PRDM2Q13029 1718 aa8.19□□□□□ -1.1
LST1-207ENST00000376092 CEP164Q9UPV0 1460 aa8.19□□□□□ -1.1
LST1-207ENST00000376092 ZEB1P37275 1124 aaPredicted RBP8.18□□□□□ -1.1
LST1-207ENST00000376092 CUX1P39880 1505 aa8.13□□□□□ -1.11
LST1-207ENST00000376092 RAPGEF2Q9Y4G8 1499 aa8.12□□□□□ -1.11
LST1-207ENST00000376092 UBTFP17480 764 aaKnown RBP8.11□□□□□ -1.11
LST1-207ENST00000376092 ERICH3Q5RHP9 1530 aa8.11□□□□□ -1.11
LST1-207ENST00000376092 CFTRP13569 1480 aa8.11□□□□□ -1.11
LST1-207ENST00000376092 CLIP1P30622 1438 aa8.1□□□□□ -1.11
LST1-207ENST00000376092 PRXQ9BXM0 1461 aa8.07□□□□□ -1.12
LST1-207ENST00000376092 VPS8Q8N3P4 1428 aa8.07□□□□□ -1.12
LST1-207ENST00000376092 CC2D2AQ9P2K1 1620 aa8.06□□□□□ -1.12
LST1-207ENST00000376092 TTBK1Q5TCY1 1321 aaPredicted RBP8.03□□□□□ -1.12
LST1-207ENST00000376092 ARAP1Q96P48 1450 aa8.03□□□□□ -1.12
LST1-207ENST00000376092 KIF27Q86VH2 1401 aa8.03□□□□□ -1.12
LST1-207ENST00000376092 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.02□□□□□ -1.13
LST1-207ENST00000376092 CCER1Q8TC90 406 aaPredicted RBP8.01□□□□□ -1.13
LST1-207ENST00000376092 CADPSQ9ULU8 1353 aa7.99□□□□□ -1.13
LST1-207ENST00000376092 FGD5Q6ZNL6 1462 aa7.99□□□□□ -1.13
LST1-207ENST00000376092 CUX2O14529 1486 aa7.97□□□□□ -1.13
LST1-207ENST00000376092 DNMBPQ6XZF7 1577 aa7.97□□□□□ -1.13
LST1-207ENST00000376092 FANCD2Q9BXW9 1451 aa7.94□□□□□ -1.14
LST1-207ENST00000376092 ARHGAP35Q9NRY4 1499 aa7.94□□□□□ -1.14
LST1-207ENST00000376092 WDR97A6NE52 1622 aa7.93□□□□□ -1.14
LST1-207ENST00000376092 RANGAP1P46060 587 aaPredicted RBP7.93□□□□□ -1.14
LST1-207ENST00000376092 APLP2Q06481 763 aa7.92□□□□□ -1.14
LST1-207ENST00000376092 IGF1RP08069 1367 aa7.91□□□□□ -1.14
LST1-207ENST00000376092 TOPBP1Q92547 1522 aa7.91□□□□□ -1.14
LST1-207ENST00000376092 LAMC3Q9Y6N6 1575 aa7.91□□□□□ -1.14
LST1-207ENST00000376092 CUL7Q14999 1698 aa7.91□□□□□ -1.14
LST1-207ENST00000376092 CFAP43Q8NDM7 1665 aa7.91□□□□□ -1.14
LST1-207ENST00000376092 CTTNBP2Q8WZ74 1663 aa7.9□□□□□ -1.14
LST1-207ENST00000376092 NESP48681 1621 aa7.9□□□□□ -1.14
LST1-207ENST00000376092 ABCA10Q8WWZ4 1543 aa7.9□□□□□ -1.14
LST1-207ENST00000376092 TIAM1Q13009 1591 aa7.89□□□□□ -1.15
LST1-207ENST00000376092 POLA1P09884 1462 aaPredicted RBP7.88□□□□□ -1.15
LST1-207ENST00000376092 CARMIL1Q5VZK9 1371 aa7.88□□□□□ -1.15
LST1-207ENST00000376092 HNRNPUL2Q1KMD3 747 aaKnown RBP7.88□□□□□ -1.15
LST1-207ENST00000376092 PCF11O94913 1555 aaKnown RBP7.88□□□□□ -1.15
LST1-207ENST00000376092 MAP3K1Q13233 1512 aa7.88□□□□□ -1.15
LST1-207ENST00000376092 RRBP1Q9P2E9 1410 aaKnown RBP7.87□□□□□ -1.15
LST1-207ENST00000376092 PPP6R1Q9UPN7 881 aa7.87□□□□□ -1.15
LST1-207ENST00000376092 RAD54L2Q9Y4B4 1467 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms