RNA–Protein interactions for RNA: ENST00000375028.8

CCDC7-205, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 2

Gene CCDC7, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-205ENST00000375028 POTEDQ86YR6 584 aa8.69□□□□□ -1.02
CCDC7-205ENST00000375028 CHIC1Q5VXU3 224 aa7.52□□□□□ -1.21
CCDC7-205ENST00000375028 AEBP2Q6ZN18 517 aaPredicted RBP7.47□□□□□ -1.21
CCDC7-205ENST00000375028 SENP3Q9H4L4 574 aaPredicted RBP7.04□□□□□ -1.28
CCDC7-205ENST00000375028 RBAK-RBAKDNI3L0D1 243 aa7.01□□□□□ -1.29
CCDC7-205ENST00000375028 DNAJC5Q9H3Z4 198 aa6.82□□□□□ -1.32
CCDC7-205ENST00000375028 NISCHQ9Y2I1 1504 aa6.81□□□□□ -1.32
CCDC7-205ENST00000375028 MSH5O43196 834 aa6.74□□□□□ -1.33
CCDC7-205ENST00000375028 CCDC180Q9P1Z9 1646 aa6.71□□□□□ -1.34
CCDC7-205ENST00000375028 SHROOM4Q9ULL8 1493 aa6.63□□□□□ -1.35
CCDC7-205ENST00000375028 PHF23Q9BUL5 403 aaPredicted RBP6.53□□□□□ -1.36
CCDC7-205ENST00000375028 ABCC9O60706 1549 aa6.5□□□□□ -1.37
CCDC7-205ENST00000375028 CUX2O14529 1486 aa6.5□□□□□ -1.37
CCDC7-205ENST00000375028 RB1CC1Q8TDY2 1594 aa6.48□□□□□ -1.37
CCDC7-205ENST00000375028 POTEHQ6S545 545 aa6.47□□□□□ -1.37
CCDC7-205ENST00000375028 DNAJC5BQ9UF47 199 aa6.43□□□□□ -1.38
CCDC7-205ENST00000375028 NACADO15069 1562 aa6.35□□□□□ -1.39
CCDC7-205ENST00000375028 FOXD1Q16676 465 aa6.32□□□□□ -1.4
CCDC7-205ENST00000375028 MYO15BQ96JP2 1530 aa6.29□□□□□ -1.4
CCDC7-205ENST00000375028 UNC13AQ9UPW8 1703 aa6.18□□□□□ -1.42
CCDC7-205ENST00000375028 CECR2Q9BXF3 1484 aa6.15□□□□□ -1.43
CCDC7-205ENST00000375028 CC2D2AQ9P2K1 1620 aa6.14□□□□□ -1.43
CCDC7-205ENST00000375028 CACNB1Q02641 598 aaPredicted RBP6.12□□□□□ -1.43
CCDC7-205ENST00000375028 BICRAQ9NZM4 1560 aa6.1□□□□□ -1.43
CCDC7-205ENST00000375028 EIF4G1Q04637 1599 aaKnown RBP6.02□□□□□ -1.45
CCDC7-205ENST00000375028 PLSCR2Q9NRY7 297 aa5.99□□□□□ -1.45
CCDC7-205ENST00000375028 THOC2Q8NI27 1593 aaKnown RBP5.92□□□□□ -1.46
CCDC7-205ENST00000375028 ERCC6L2Q5T890 1561 aa5.89□□□□□ -1.47
CCDC7-205ENST00000375028 PABPN1Q86U42 306 aaKnown RBP eCLIP5.89□□□□□ -1.47
CCDC7-205ENST00000375028 DCAF1Q9Y4B6 1507 aa5.86□□□□□ -1.47
CCDC7-205ENST00000375028 BAZ1AQ9NRL2 1556 aaPredicted RBP5.85□□□□□ -1.47
CCDC7-205ENST00000375028 ERCC6Q03468 1493 aa5.84□□□□□ -1.47
CCDC7-205ENST00000375028 LAMC3Q9Y6N6 1575 aa5.81□□□□□ -1.48
CCDC7-205ENST00000375028 RIMBP3CA6NJZ7 1639 aa5.79□□□□□ -1.48
CCDC7-205ENST00000375028 RIMBP3BA6NNM3 1639 aa5.79□□□□□ -1.48
CCDC7-205ENST00000375028 RIMBP3Q9UFD9 1639 aa5.79□□□□□ -1.48
CCDC7-205ENST00000375028 HMGXB3Q12766 1538 aa5.77□□□□□ -1.49
CCDC7-205ENST00000375028 TRIM41Q8WV44 630 aa5.76□□□□□ -1.49
CCDC7-205ENST00000375028 SMARCA2P51531 1590 aa5.75□□□□□ -1.49
CCDC7-205ENST00000375028 PIAS4Q8N2W9 510 aaPredicted RBP5.74□□□□□ -1.49
CCDC7-205ENST00000375028 WDR62O43379 1518 aa5.73□□□□□ -1.49
CCDC7-205ENST00000375028 NCAPD3P42695 1498 aa5.71□□□□□ -1.5
CCDC7-205ENST00000375028 RSF1Q96T23 1441 aaPredicted RBP5.69□□□□□ -1.5
CCDC7-205ENST00000375028 ILDR1Q86SU0 546 aaPredicted RBP5.68□□□□□ -1.5
CCDC7-205ENST00000375028 ARHGEF11O15085 1522 aa5.65□□□□□ -1.5
CCDC7-205ENST00000375028 WDR97A6NE52 1622 aa5.64□□□□□ -1.51
CCDC7-205ENST00000375028 MRC2Q9UBG0 1479 aa5.63□□□□□ -1.51
CCDC7-205ENST00000375028 PDS5BQ9NTI5 1447 aa5.63□□□□□ -1.51
CCDC7-205ENST00000375028 OSCARQ8IYS5 282 aa5.63□□□□□ -1.51
CCDC7-205ENST00000375028 BAZ1BQ9UIG0 1483 aaKnown RBP5.63□□□□□ -1.51
CCDC7-205ENST00000375028 SOCS7O14512 581 aa5.61□□□□□ -1.51
CCDC7-205ENST00000375028 FBXO41Q8TF61 875 aa5.6□□□□□ -1.51
CCDC7-205ENST00000375028 KIF21AQ7Z4S6 1674 aa5.59□□□□□ -1.51
CCDC7-205ENST00000375028 PEG3Q9GZU2 1588 aa5.57□□□□□ -1.52
CCDC7-205ENST00000375028 LMTK3Q96Q04 1460 aa5.55□□□□□ -1.52
CCDC7-205ENST00000375028 ARAP1Q96P48 1450 aa5.51□□□□□ -1.53
CCDC7-205ENST00000375028 PRDM2Q13029 1718 aa5.5□□□□□ -1.53
CCDC7-205ENST00000375028 NESP48681 1621 aa5.49□□□□□ -1.53
CCDC7-205ENST00000375028 C1QBPQ07021 282 aaKnown RBP5.49□□□□□ -1.53
CCDC7-205ENST00000375028 KDM6BO15054 1643 aa5.48□□□□□ -1.53
CCDC7-205ENST00000375028 TOP2BQ02880 1626 aa5.48□□□□□ -1.53
CCDC7-205ENST00000375028 SCRIBQ14160 1630 aa5.48□□□□□ -1.53
CCDC7-205ENST00000375028 SPATA31D1Q6ZQQ2 1576 aa5.47□□□□□ -1.53
CCDC7-205ENST00000375028 CLASP1Q7Z460 1538 aa5.45□□□□□ -1.54
CCDC7-205ENST00000375028 IQSEC2Q5JU85 1478 aa5.45□□□□□ -1.54
CCDC7-205ENST00000375028 HECW2Q9P2P5 1572 aa5.44□□□□□ -1.54
CCDC7-205ENST00000375028 IFT140Q96RY7 1462 aa5.43□□□□□ -1.54
CCDC7-205ENST00000375028 ATAD2BQ9ULI0 1458 aa5.43□□□□□ -1.54
CCDC7-205ENST00000375028 KIF13AQ9H1H9 1805 aa5.42□□□□□ -1.54
CCDC7-205ENST00000375028 RNF39Q9H2S5 420 aa5.41□□□□□ -1.54
CCDC7-205ENST00000375028 ZCCHC6Q5VYS8 1495 aaKnown RBP5.41□□□□□ -1.54
CCDC7-205ENST00000375028 SYNJ1O43426 1573 aa5.41□□□□□ -1.54
CCDC7-205ENST00000375028 ABCC8Q09428 1581 aa5.41□□□□□ -1.54
CCDC7-205ENST00000375028 CEP164Q9UPV0 1460 aa5.41□□□□□ -1.54
CCDC7-205ENST00000375028 CHD1O14646 1710 aa5.4□□□□□ -1.55
CCDC7-205ENST00000375028 TRHP20396 242 aaPredicted RBP5.36□□□□□ -1.55
CCDC7-205ENST00000375028 MAPKBP1O60336 1514 aa5.36□□□□□ -1.55
CCDC7-205ENST00000375028 SMARCA4P51532 1647 aa5.36□□□□□ -1.55
CCDC7-205ENST00000375028 DMRT2Q9Y5R5 561 aa5.36□□□□□ -1.55
CCDC7-205ENST00000375028 CADPSQ9ULU8 1353 aa5.33□□□□□ -1.56
CCDC7-205ENST00000375028 EIF4G3O43432 1585 aaKnown RBP5.31□□□□□ -1.56
CCDC7-205ENST00000375028 GLI2P10070 1586 aa5.29□□□□□ -1.56
CCDC7-205ENST00000375028 KIAA0586Q9BVV6 1533 aa5.28□□□□□ -1.56
CCDC7-205ENST00000375028 ADGRL1O94910 1474 aa5.27□□□□□ -1.57
CCDC7-205ENST00000375028 MAGI1Q96QZ7 1491 aaPredicted RBP5.27□□□□□ -1.57
CCDC7-205ENST00000375028 ABCC10Q5T3U5 1492 aa5.27□□□□□ -1.57
CCDC7-205ENST00000375028 SHROOM2Q13796 1616 aa5.27□□□□□ -1.57
CCDC7-205ENST00000375028 SYNJ2O15056 1496 aa5.27□□□□□ -1.57
CCDC7-205ENST00000375028 DIP2BQ9P265 1576 aa5.26□□□□□ -1.57
CCDC7-205ENST00000375028 FANCD2Q9BXW9 1451 aa5.24□□□□□ -1.57
CCDC7-205ENST00000375028 SP7Q8TDD2 431 aaPredicted RBP5.24□□□□□ -1.57
CCDC7-205ENST00000375028 ZNF608Q9ULD9 1512 aaPredicted RBP5.23□□□□□ -1.57
CCDC7-205ENST00000375028 KDM4FA0A1W2PPD8 638 aa5.23□□□□□ -1.57
CCDC7-205ENST00000375028 GAPVD1Q14C86 1478 aa5.22□□□□□ -1.57
CCDC7-205ENST00000375028 DISP3Q9P2K9 1392 aa5.22□□□□□ -1.57
CCDC7-205ENST00000375028 CFTRP13569 1480 aa5.22□□□□□ -1.57
CCDC7-205ENST00000375028 TARBP1Q13395 1621 aaKnown RBP5.21□□□□□ -1.57
CCDC7-205ENST00000375028 CYB5RLQ6IPT4 315 aa5.2□□□□□ -1.58
CCDC7-205ENST00000375028 URB2Q14146 1524 aaKnown RBP5.2□□□□□ -1.58
CCDC7-205ENST00000375028 DNMBPQ6XZF7 1577 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms