RNA–Protein interactions for RNA: ENST00000374940.3

HLA-DQA2-210, Transcript of major histocompatibility complex, class II, DQ alpha 2, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA2, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2-210ENST00000374940 NISCHQ9Y2I1 1504 aa29.49■■■□□ 2.31
HLA-DQA2-210ENST00000374940 CCDC180Q9P1Z9 1646 aa26.13■■□□□ 1.77
HLA-DQA2-210ENST00000374940 ABCC9O60706 1549 aa25.43■■□□□ 1.66
HLA-DQA2-210ENST00000374940 DCAF8L2P0C7V8 631 aa24.6■■□□□ 1.53
HLA-DQA2-210ENST00000374940 ZCCHC6Q5VYS8 1495 aaKnown RBP24.59■■□□□ 1.53
HLA-DQA2-210ENST00000374940 NACADO15069 1562 aa24.55■■□□□ 1.52
HLA-DQA2-210ENST00000374940 RB1CC1Q8TDY2 1594 aa24.54■■□□□ 1.52
HLA-DQA2-210ENST00000374940 MYO15BQ96JP2 1530 aa24.47■■□□□ 1.51
HLA-DQA2-210ENST00000374940 DCAF1Q9Y4B6 1507 aa24.42■■□□□ 1.5
HLA-DQA2-210ENST00000374940 UNC13AQ9UPW8 1703 aa23.91■■□□□ 1.42
HLA-DQA2-210ENST00000374940 SCRIBQ14160 1630 aa23.85■■□□□ 1.41
HLA-DQA2-210ENST00000374940 PABPN1Q86U42 306 aaKnown RBP eCLIP23.79■■□□□ 1.4
HLA-DQA2-210ENST00000374940 BICRAQ9NZM4 1560 aa23.76■■□□□ 1.39
HLA-DQA2-210ENST00000374940 SHROOM4Q9ULL8 1493 aa23.57■■□□□ 1.36
HLA-DQA2-210ENST00000374940 DNAJC5BQ9UF47 199 aa23.19■■□□□ 1.3
HLA-DQA2-210ENST00000374940 EIF4G1Q04637 1599 aaKnown RBP23.14■■□□□ 1.29
HLA-DQA2-210ENST00000374940 CC2D2AQ9P2K1 1620 aa23■■□□□ 1.27
HLA-DQA2-210ENST00000374940 CECR2Q9BXF3 1484 aa22.95■■□□□ 1.26
HLA-DQA2-210ENST00000374940 BAZ1AQ9NRL2 1556 aaPredicted RBP22.85■■□□□ 1.25
HLA-DQA2-210ENST00000374940 SMARCA4P51532 1647 aa22.83■■□□□ 1.25
HLA-DQA2-210ENST00000374940 AEBP2Q6ZN18 517 aaPredicted RBP22.77■■□□□ 1.24
HLA-DQA2-210ENST00000374940 MROH2BQ7Z745 1585 aa22.71■■□□□ 1.23
HLA-DQA2-210ENST00000374940 ATAD2BQ9ULI0 1458 aa22.69■■□□□ 1.22
HLA-DQA2-210ENST00000374940 SMARCA2P51531 1590 aa22.67■■□□□ 1.22
HLA-DQA2-210ENST00000374940 NCAPD3P42695 1498 aa22.66■■□□□ 1.22
HLA-DQA2-210ENST00000374940 PEG3Q9GZU2 1588 aa22.62■■□□□ 1.21
HLA-DQA2-210ENST00000374940 HMGXB3Q12766 1538 aa22.55■■□□□ 1.2
HLA-DQA2-210ENST00000374940 RSF1Q96T23 1441 aaPredicted RBP22.52■■□□□ 1.2
HLA-DQA2-210ENST00000374940 BAZ1BQ9UIG0 1483 aaKnown RBP22.51■■□□□ 1.19
HLA-DQA2-210ENST00000374940 WIZO95785 1651 aa22.46■■□□□ 1.19
HLA-DQA2-210ENST00000374940 TOP2AP11388 1531 aaKnown RBP22.26■■□□□ 1.15
HLA-DQA2-210ENST00000374940 SUPT5HO00267 1087 aaKnown RBP22.08■■□□□ 1.13
HLA-DQA2-210ENST00000374940 NESP48681 1621 aa22.03■■□□□ 1.12
HLA-DQA2-210ENST00000374940 LAMC3Q9Y6N6 1575 aa22.03■■□□□ 1.12
HLA-DQA2-210ENST00000374940 CADPSQ9ULU8 1353 aa22.02■■□□□ 1.12
HLA-DQA2-210ENST00000374940 CCDC88BA6NC98 1476 aa22■■□□□ 1.11
HLA-DQA2-210ENST00000374940 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
HLA-DQA2-210ENST00000374940 ERCC6Q03468 1493 aa21.92■■□□□ 1.1
HLA-DQA2-210ENST00000374940 CFTRP13569 1480 aa21.91■■□□□ 1.1
HLA-DQA2-210ENST00000374940 PDS5BQ9NTI5 1447 aa21.9■■□□□ 1.1
HLA-DQA2-210ENST00000374940 KIF21AQ7Z4S6 1674 aa21.76■■□□□ 1.07
HLA-DQA2-210ENST00000374940 FANCD2Q9BXW9 1451 aa21.75■■□□□ 1.07
HLA-DQA2-210ENST00000374940 CEP164Q9UPV0 1460 aa21.7■■□□□ 1.06
HLA-DQA2-210ENST00000374940 PRDM2Q13029 1718 aa21.69■■□□□ 1.06
HLA-DQA2-210ENST00000374940 THOC2Q8NI27 1593 aaKnown RBP21.66■■□□□ 1.06
HLA-DQA2-210ENST00000374940 MRC2Q9UBG0 1479 aa21.64■■□□□ 1.06
HLA-DQA2-210ENST00000374940 CUX2O14529 1486 aa21.64■■□□□ 1.05
HLA-DQA2-210ENST00000374940 WDR62O43379 1518 aa21.56■■□□□ 1.04
HLA-DQA2-210ENST00000374940 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
HLA-DQA2-210ENST00000374940 ABCC8Q09428 1581 aa21.45■■□□□ 1.02
HLA-DQA2-210ENST00000374940 TOPBP1Q92547 1522 aa21.41■■□□□ 1.02
HLA-DQA2-210ENST00000374940 DNMBPQ6XZF7 1577 aa21.4■■□□□ 1.02
HLA-DQA2-210ENST00000374940 CUX1P39880 1505 aa21.29■■□□□ 1
HLA-DQA2-210ENST00000374940 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
HLA-DQA2-210ENST00000374940 WRNQ14191 1432 aaPredicted RBP eCLIP21.24■□□□□ 0.99
HLA-DQA2-210ENST00000374940 POLA1P09884 1462 aaPredicted RBP21.24■□□□□ 0.99
HLA-DQA2-210ENST00000374940 FGD5Q6ZNL6 1462 aa21.21■□□□□ 0.99
HLA-DQA2-210ENST00000374940 SOGA1O94964 1423 aa21.18■□□□□ 0.98
HLA-DQA2-210ENST00000374940 TOP2BQ02880 1626 aa21.16■□□□□ 0.98
HLA-DQA2-210ENST00000374940 TARBP1Q13395 1621 aaKnown RBP21.16■□□□□ 0.98
HLA-DQA2-210ENST00000374940 SYNJ1O43426 1573 aa21.15■□□□□ 0.98
HLA-DQA2-210ENST00000374940 BIVM-ERCC5R4GMW8 1640 aa21.15■□□□□ 0.98
HLA-DQA2-210ENST00000374940 RAD54L2Q9Y4B4 1467 aa21.15■□□□□ 0.98
HLA-DQA2-210ENST00000374940 ZNF608Q9ULD9 1512 aaPredicted RBP21.12■□□□□ 0.97
HLA-DQA2-210ENST00000374940 AQRO60306 1485 aaKnown RBP eCLIP21.04■□□□□ 0.96
HLA-DQA2-210ENST00000374940 EIF4G3O43432 1585 aaKnown RBP21.04■□□□□ 0.96
HLA-DQA2-210ENST00000374940 ABCA10Q8WWZ4 1543 aa21.03■□□□□ 0.96
HLA-DQA2-210ENST00000374940 TDRD9Q8NDG6 1382 aaKnown RBP21.03■□□□□ 0.96
HLA-DQA2-210ENST00000374940 WDR97A6NE52 1622 aa21.02■□□□□ 0.96
HLA-DQA2-210ENST00000374940 GAPVD1Q14C86 1478 aa20.92■□□□□ 0.94
HLA-DQA2-210ENST00000374940 GRIN2BQ13224 1484 aa20.91■□□□□ 0.94
HLA-DQA2-210ENST00000374940 ABCA5Q8WWZ7 1642 aa20.9■□□□□ 0.94
HLA-DQA2-210ENST00000374940 TRIM41Q8WV44 630 aa20.87■□□□□ 0.93
HLA-DQA2-210ENST00000374940 SNAPC4Q5SXM2 1469 aa20.84■□□□□ 0.93
HLA-DQA2-210ENST00000374940 MAGI1Q96QZ7 1491 aaPredicted RBP20.84■□□□□ 0.93
HLA-DQA2-210ENST00000374940 PBRM1Q86U86 1689 aa20.82■□□□□ 0.92
HLA-DQA2-210ENST00000374940 KIF27Q86VH2 1401 aa20.8■□□□□ 0.92
HLA-DQA2-210ENST00000374940 DNAJC5Q9H3Z4 198 aa20.8■□□□□ 0.92
HLA-DQA2-210ENST00000374940 OSCARQ8IYS5 282 aa20.78■□□□□ 0.92
HLA-DQA2-210ENST00000374940 FBLN2P98095 1184 aa20.78■□□□□ 0.92
HLA-DQA2-210ENST00000374940 ERICH3Q5RHP9 1530 aa20.77■□□□□ 0.92
HLA-DQA2-210ENST00000374940 CHMP7Q8WUX9 453 aaPredicted RBP20.75■□□□□ 0.91
HLA-DQA2-210ENST00000374940 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
HLA-DQA2-210ENST00000374940 CHD1O14646 1710 aa20.71■□□□□ 0.91
HLA-DQA2-210ENST00000374940 FHAD1B1AJZ9 1412 aa20.7■□□□□ 0.9
HLA-DQA2-210ENST00000374940 IGF1RP08069 1367 aa20.69■□□□□ 0.9
HLA-DQA2-210ENST00000374940 ADAMTS12P58397 1594 aa20.69■□□□□ 0.9
HLA-DQA2-210ENST00000374940 GRIN2AQ12879 1464 aa20.63■□□□□ 0.89
HLA-DQA2-210ENST00000374940 RUSC2Q8N2Y8 1516 aa20.62■□□□□ 0.89
HLA-DQA2-210ENST00000374940 CUL7Q14999 1698 aa20.6■□□□□ 0.89
HLA-DQA2-210ENST00000374940 CARMIL1Q5VZK9 1371 aa20.57■□□□□ 0.88
HLA-DQA2-210ENST00000374940 NUP160Q12769 1436 aa20.53■□□□□ 0.88
HLA-DQA2-210ENST00000374940 CLASP1Q7Z460 1538 aa20.53■□□□□ 0.88
HLA-DQA2-210ENST00000374940 EEA1Q15075 1411 aa20.51■□□□□ 0.87
HLA-DQA2-210ENST00000374940 CEP170Q5SW79 1584 aa20.5■□□□□ 0.87
HLA-DQA2-210ENST00000374940 CSRNP3Q8WYN3 585 aa20.47■□□□□ 0.87
HLA-DQA2-210ENST00000374940 RAPGEF2Q9Y4G8 1499 aa20.47■□□□□ 0.87
HLA-DQA2-210ENST00000374940 PRXQ9BXM0 1461 aa20.42■□□□□ 0.86
HLA-DQA2-210ENST00000374940 ARHGEF11O15085 1522 aa20.42■□□□□ 0.86
HLA-DQA2-210ENST00000374940 FAM9AQ8IZU1 332 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms