RNA–Protein interactions for RNA: ENST00000374738.3

PGAP1-202, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 5

Gene PGAP1, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-202ENST00000374738 NISCHQ9Y2I1 1504 aa52.66■■■■■ 6.02
PGAP1-202ENST00000374738 CCDC180Q9P1Z9 1646 aa46.62■■■■■ 5.05
PGAP1-202ENST00000374738 ABCC9O60706 1549 aa45.25■■■■■ 4.83
PGAP1-202ENST00000374738 ZCCHC6Q5VYS8 1495 aaKnown RBP43.92■■■■■ 4.62
PGAP1-202ENST00000374738 NACADO15069 1562 aa43.86■■■■■ 4.61
PGAP1-202ENST00000374738 MYO15BQ96JP2 1530 aa43.83■■■■■ 4.61
PGAP1-202ENST00000374738 DCAF8L2P0C7V8 631 aa43.77■■■■■ 4.6
PGAP1-202ENST00000374738 RB1CC1Q8TDY2 1594 aa43.76■■■■■ 4.6
PGAP1-202ENST00000374738 DCAF1Q9Y4B6 1507 aa43.71■■■■■ 4.59
PGAP1-202ENST00000374738 UNC13AQ9UPW8 1703 aa42.52■■■■■ 4.4
PGAP1-202ENST00000374738 SCRIBQ14160 1630 aa42.42■■■■■ 4.38
PGAP1-202ENST00000374738 BICRAQ9NZM4 1560 aa42.37■■■■■ 4.37
PGAP1-202ENST00000374738 PABPN1Q86U42 306 aaKnown RBP eCLIP42.37■■■■■ 4.37
PGAP1-202ENST00000374738 SHROOM4Q9ULL8 1493 aa42.18■■■■■ 4.34
PGAP1-202ENST00000374738 DNAJC5BQ9UF47 199 aa41.31■■■■■ 4.2
PGAP1-202ENST00000374738 EIF4G1Q04637 1599 aaKnown RBP41.25■■■■■ 4.19
PGAP1-202ENST00000374738 CC2D2AQ9P2K1 1620 aa40.95■■■■■ 4.15
PGAP1-202ENST00000374738 CECR2Q9BXF3 1484 aa40.91■■■■■ 4.14
PGAP1-202ENST00000374738 BAZ1AQ9NRL2 1556 aaPredicted RBP40.8■■■■■ 4.12
PGAP1-202ENST00000374738 SMARCA4P51532 1647 aa40.71■■■■■ 4.11
PGAP1-202ENST00000374738 NCAPD3P42695 1498 aa40.52■■■■■ 4.08
PGAP1-202ENST00000374738 MROH2BQ7Z745 1585 aa40.51■■■■■ 4.08
PGAP1-202ENST00000374738 ATAD2BQ9ULI0 1458 aa40.51■■■■■ 4.07
PGAP1-202ENST00000374738 SMARCA2P51531 1590 aa40.48■■■■■ 4.07
PGAP1-202ENST00000374738 PEG3Q9GZU2 1588 aa40.44■■■■■ 4.06
PGAP1-202ENST00000374738 HMGXB3Q12766 1538 aa40.26■■■■■ 4.04
PGAP1-202ENST00000374738 RSF1Q96T23 1441 aaPredicted RBP40.25■■■■■ 4.03
PGAP1-202ENST00000374738 BAZ1BQ9UIG0 1483 aaKnown RBP40.15■■■■■ 4.02
PGAP1-202ENST00000374738 WIZO95785 1651 aa40■■■■□ 3.99
PGAP1-202ENST00000374738 TOP2AP11388 1531 aaKnown RBP39.72■■■■□ 3.95
PGAP1-202ENST00000374738 SUPT5HO00267 1087 aaKnown RBP39.35■■■■□ 3.89
PGAP1-202ENST00000374738 CADPSQ9ULU8 1353 aa39.33■■■■□ 3.89
PGAP1-202ENST00000374738 LAMC3Q9Y6N6 1575 aa39.3■■■■□ 3.88
PGAP1-202ENST00000374738 CCDC88BA6NC98 1476 aa39.27■■■■□ 3.88
PGAP1-202ENST00000374738 NESP48681 1621 aa39.22■■■■□ 3.87
PGAP1-202ENST00000374738 CFTRP13569 1480 aa39.15■■■■□ 3.86
PGAP1-202ENST00000374738 PDS5BQ9NTI5 1447 aa39.11■■■■□ 3.85
PGAP1-202ENST00000374738 ERCC6Q03468 1493 aa39.02■■■■□ 3.84
PGAP1-202ENST00000374738 FANCD2Q9BXW9 1451 aa38.79■■■■□ 3.8
PGAP1-202ENST00000374738 CEP164Q9UPV0 1460 aa38.71■■■■□ 3.79
PGAP1-202ENST00000374738 KIF21AQ7Z4S6 1674 aa38.68■■■■□ 3.78
PGAP1-202ENST00000374738 PRDM2Q13029 1718 aa38.63■■■■□ 3.78
PGAP1-202ENST00000374738 CUX2O14529 1486 aa38.61■■■■□ 3.77
PGAP1-202ENST00000374738 MRC2Q9UBG0 1479 aa38.6■■■■□ 3.77
PGAP1-202ENST00000374738 THOC2Q8NI27 1593 aaKnown RBP38.57■■■■□ 3.77
PGAP1-202ENST00000374738 WDR62O43379 1518 aa38.46■■■■□ 3.75
PGAP1-202ENST00000374738 ABCC8Q09428 1581 aa38.36■■■■□ 3.73
PGAP1-202ENST00000374738 URB2Q14146 1524 aaKnown RBP38.35■■■■□ 3.73
PGAP1-202ENST00000374738 TOPBP1Q92547 1522 aa38.19■■■■□ 3.7
PGAP1-202ENST00000374738 DNMBPQ6XZF7 1577 aa38.17■■■■□ 3.7
PGAP1-202ENST00000374738 CUX1P39880 1505 aa37.98■■■■□ 3.67
PGAP1-202ENST00000374738 IFT140Q96RY7 1462 aa37.95■■■■□ 3.67
PGAP1-202ENST00000374738 WRNQ14191 1432 aaPredicted RBP eCLIP37.94■■■■□ 3.66
PGAP1-202ENST00000374738 POLA1P09884 1462 aaPredicted RBP37.89■■■■□ 3.66
PGAP1-202ENST00000374738 FGD5Q6ZNL6 1462 aa37.82■■■■□ 3.64
PGAP1-202ENST00000374738 SOGA1O94964 1423 aa37.8■■■■□ 3.64
PGAP1-202ENST00000374738 TOP2BQ02880 1626 aa37.77■■■■□ 3.64
PGAP1-202ENST00000374738 BIVM-ERCC5R4GMW8 1640 aa37.72■■■■□ 3.63
PGAP1-202ENST00000374738 TARBP1Q13395 1621 aaKnown RBP37.72■■■■□ 3.63
PGAP1-202ENST00000374738 SYNJ1O43426 1573 aa37.69■■■■□ 3.62
PGAP1-202ENST00000374738 RAD54L2Q9Y4B4 1467 aa37.67■■■■□ 3.62
PGAP1-202ENST00000374738 ZNF608Q9ULD9 1512 aaPredicted RBP37.62■■■■□ 3.61
PGAP1-202ENST00000374738 WDR97A6NE52 1622 aa37.58■■■■□ 3.61
PGAP1-202ENST00000374738 ABCA10Q8WWZ4 1543 aa37.56■■■■□ 3.6
PGAP1-202ENST00000374738 TDRD9Q8NDG6 1382 aaKnown RBP37.49■■■■□ 3.59
PGAP1-202ENST00000374738 AQRO60306 1485 aaKnown RBP eCLIP37.49■■■■□ 3.59
PGAP1-202ENST00000374738 EIF4G3O43432 1585 aaKnown RBP37.45■■■■□ 3.59
PGAP1-202ENST00000374738 GAPVD1Q14C86 1478 aa37.34■■■■□ 3.57
PGAP1-202ENST00000374738 GRIN2BQ13224 1484 aa37.33■■■■□ 3.57
PGAP1-202ENST00000374738 TRIM41Q8WV44 630 aa37.27■■■■□ 3.56
PGAP1-202ENST00000374738 ABCA5Q8WWZ7 1642 aa37.27■■■■□ 3.56
PGAP1-202ENST00000374738 MAGI1Q96QZ7 1491 aaPredicted RBP37.2■■■■□ 3.55
PGAP1-202ENST00000374738 KIF27Q86VH2 1401 aa37.16■■■■□ 3.54
PGAP1-202ENST00000374738 SNAPC4Q5SXM2 1469 aa37.13■■■■□ 3.54
PGAP1-202ENST00000374738 ERICH3Q5RHP9 1530 aa37.11■■■■□ 3.53
PGAP1-202ENST00000374738 OSCARQ8IYS5 282 aa37.11■■■■□ 3.53
PGAP1-202ENST00000374738 DNAJC5Q9H3Z4 198 aa37.09■■■■□ 3.53
PGAP1-202ENST00000374738 PBRM1Q86U86 1689 aa37.05■■■■□ 3.52
PGAP1-202ENST00000374738 SYNJ2O15056 1496 aa37.03■■■■□ 3.52
PGAP1-202ENST00000374738 CHIC1Q5VXU3 224 aa37.01■■■■□ 3.52
PGAP1-202ENST00000374738 CHMP7Q8WUX9 453 aaPredicted RBP37.01■■■■□ 3.52
PGAP1-202ENST00000374738 IGF1RP08069 1367 aa36.99■■■■□ 3.51
PGAP1-202ENST00000374738 FHAD1B1AJZ9 1412 aa36.98■■■■□ 3.51
PGAP1-202ENST00000374738 FBLN2P98095 1184 aa36.95■■■■□ 3.51
PGAP1-202ENST00000374738 ADAMTS12P58397 1594 aa36.88■■■■□ 3.49
PGAP1-202ENST00000374738 CHD1O14646 1710 aa36.82■■■■□ 3.49
PGAP1-202ENST00000374738 GRIN2AQ12879 1464 aa36.8■■■■□ 3.48
PGAP1-202ENST00000374738 CUL7Q14999 1698 aa36.76■■■■□ 3.47
PGAP1-202ENST00000374738 CARMIL1Q5VZK9 1371 aa36.76■■■■□ 3.47
PGAP1-202ENST00000374738 RUSC2Q8N2Y8 1516 aa36.75■■■■□ 3.47
PGAP1-202ENST00000374738 EEA1Q15075 1411 aa36.73■■■■□ 3.47
PGAP1-202ENST00000374738 NUP160Q12769 1436 aa36.68■■■■□ 3.46
PGAP1-202ENST00000374738 CLASP1Q7Z460 1538 aa36.61■■■■□ 3.45
PGAP1-202ENST00000374738 CSRNP3Q8WYN3 585 aa36.6■■■■□ 3.45
PGAP1-202ENST00000374738 RAPGEF2Q9Y4G8 1499 aa36.56■■■■□ 3.44
PGAP1-202ENST00000374738 PRXQ9BXM0 1461 aa36.52■■■■□ 3.44
PGAP1-202ENST00000374738 CEP170Q5SW79 1584 aa36.52■■■■□ 3.44
PGAP1-202ENST00000374738 KIAA0586Q9BVV6 1533 aa36.43■■■■□ 3.42
PGAP1-202ENST00000374738 ARHGEF11O15085 1522 aa36.36■■■■□ 3.41
PGAP1-202ENST00000374738 JPH4Q96JJ6 628 aa36.34■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms