RNA–Protein interactions for RNA: ENST00000374461.1

SVEP1-201, Transcript of sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SVEP1, Length 3,257 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVEP1-201ENST00000374461 NISCHQ9Y2I1 1504 aa26.19■■□□□ 1.78
SVEP1-201ENST00000374461 DCAF8L2P0C7V8 631 aa22.46■■□□□ 1.19
SVEP1-201ENST00000374461 CCDC180Q9P1Z9 1646 aa22.45■■□□□ 1.18
SVEP1-201ENST00000374461 SHROOM4Q9ULL8 1493 aa22.13■■□□□ 1.13
SVEP1-201ENST00000374461 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
SVEP1-201ENST00000374461 ABCC9O60706 1549 aa21.83■■□□□ 1.08
SVEP1-201ENST00000374461 SUPT5HO00267 1087 aaKnown RBP21.4■■□□□ 1.02
SVEP1-201ENST00000374461 DCAF1Q9Y4B6 1507 aa21.35■■□□□ 1.01
SVEP1-201ENST00000374461 SCRIBQ14160 1630 aa21.16■□□□□ 0.98
SVEP1-201ENST00000374461 NACADO15069 1562 aa21.06■□□□□ 0.96
SVEP1-201ENST00000374461 MYO15BQ96JP2 1530 aa21■□□□□ 0.95
SVEP1-201ENST00000374461 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
SVEP1-201ENST00000374461 PABPN1Q86U42 306 aaKnown RBP eCLIP20.84■□□□□ 0.93
SVEP1-201ENST00000374461 CECR2Q9BXF3 1484 aa20.58■□□□□ 0.88
SVEP1-201ENST00000374461 RSF1Q96T23 1441 aaPredicted RBP20.5■□□□□ 0.87
SVEP1-201ENST00000374461 UNC13AQ9UPW8 1703 aa20.41■□□□□ 0.86
SVEP1-201ENST00000374461 MROH2BQ7Z745 1585 aa20.37■□□□□ 0.85
SVEP1-201ENST00000374461 BICRAQ9NZM4 1560 aa20.3■□□□□ 0.84
SVEP1-201ENST00000374461 CHIC1Q5VXU3 224 aa20.23■□□□□ 0.83
SVEP1-201ENST00000374461 BAZ1AQ9NRL2 1556 aaPredicted RBP20.18■□□□□ 0.82
SVEP1-201ENST00000374461 WIZO95785 1651 aa20.18■□□□□ 0.82
SVEP1-201ENST00000374461 SMARCA4P51532 1647 aa20.07■□□□□ 0.8
SVEP1-201ENST00000374461 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
SVEP1-201ENST00000374461 FAM9AQ8IZU1 332 aaPredicted RBP19.85■□□□□ 0.77
SVEP1-201ENST00000374461 ATAD2BQ9ULI0 1458 aa19.82■□□□□ 0.76
SVEP1-201ENST00000374461 EHMT2Q96KQ7 1210 aa19.82■□□□□ 0.76
SVEP1-201ENST00000374461 TOP2AP11388 1531 aaKnown RBP19.82■□□□□ 0.76
SVEP1-201ENST00000374461 CCDC88BA6NC98 1476 aa19.81■□□□□ 0.76
SVEP1-201ENST00000374461 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
SVEP1-201ENST00000374461 EIF4G1Q04637 1599 aaKnown RBP19.76■□□□□ 0.75
SVEP1-201ENST00000374461 LOC105371045A0A1W2PR82 267 aa19.73■□□□□ 0.75
SVEP1-201ENST00000374461 SMARCA2P51531 1590 aa19.69■□□□□ 0.74
SVEP1-201ENST00000374461 PCGF6Q9BYE7 350 aa19.67■□□□□ 0.74
SVEP1-201ENST00000374461 PEG3Q9GZU2 1588 aa19.62■□□□□ 0.73
SVEP1-201ENST00000374461 ABCC8Q09428 1581 aa19.54■□□□□ 0.72
SVEP1-201ENST00000374461 NCAPD3P42695 1498 aa19.54■□□□□ 0.72
SVEP1-201ENST00000374461 CC2D2AQ9P2K1 1620 aa19.48■□□□□ 0.71
SVEP1-201ENST00000374461 PPARGC1BQ86YN6 1023 aaKnown RBP19.46■□□□□ 0.71
SVEP1-201ENST00000374461 DNAJC5BQ9UF47 199 aa19.44■□□□□ 0.7
SVEP1-201ENST00000374461 HMGXB3Q12766 1538 aa19.39■□□□□ 0.7
SVEP1-201ENST00000374461 WRNQ14191 1432 aaPredicted RBP eCLIP19.34■□□□□ 0.69
SVEP1-201ENST00000374461 SOGA1O94964 1423 aa19.26■□□□□ 0.67
SVEP1-201ENST00000374461 CADPSQ9ULU8 1353 aa19.21■□□□□ 0.66
SVEP1-201ENST00000374461 HRCP23327 699 aa19.2■□□□□ 0.66
SVEP1-201ENST00000374461 CFTRP13569 1480 aa19.18■□□□□ 0.66
SVEP1-201ENST00000374461 RUSC2Q8N2Y8 1516 aa19.17■□□□□ 0.66
SVEP1-201ENST00000374461 SYNJ1O43426 1573 aa19.16■□□□□ 0.66
SVEP1-201ENST00000374461 UBTFP17480 764 aaKnown RBP19.15■□□□□ 0.66
SVEP1-201ENST00000374461 NESP48681 1621 aa19.15■□□□□ 0.66
SVEP1-201ENST00000374461 CSRNP3Q8WYN3 585 aa19.14■□□□□ 0.65
SVEP1-201ENST00000374461 RANGAP1P46060 587 aaPredicted RBP19.13■□□□□ 0.65
SVEP1-201ENST00000374461 FANCD2Q9BXW9 1451 aa19.01■□□□□ 0.63
SVEP1-201ENST00000374461 CUX1P39880 1505 aa18.99■□□□□ 0.63
SVEP1-201ENST00000374461 TTBK1Q5TCY1 1321 aaPredicted RBP18.98■□□□□ 0.63
SVEP1-201ENST00000374461 TOP2BQ02880 1626 aa18.94■□□□□ 0.62
SVEP1-201ENST00000374461 EEA1Q15075 1411 aa18.9■□□□□ 0.62
SVEP1-201ENST00000374461 PDS5BQ9NTI5 1447 aa18.84■□□□□ 0.61
SVEP1-201ENST00000374461 CEP164Q9UPV0 1460 aa18.84■□□□□ 0.61
SVEP1-201ENST00000374461 FGD5Q6ZNL6 1462 aa18.84■□□□□ 0.61
SVEP1-201ENST00000374461 CUX2O14529 1486 aa18.83■□□□□ 0.61
SVEP1-201ENST00000374461 KIF27Q86VH2 1401 aa18.82■□□□□ 0.6
SVEP1-201ENST00000374461 RAD54L2Q9Y4B4 1467 aa18.8■□□□□ 0.6
SVEP1-201ENST00000374461 BIVM-ERCC5R4GMW8 1640 aa18.8■□□□□ 0.6
SVEP1-201ENST00000374461 GOLGA3Q08378 1498 aa18.8■□□□□ 0.6
SVEP1-201ENST00000374461 RAPGEF2Q9Y4G8 1499 aa18.79■□□□□ 0.6
SVEP1-201ENST00000374461 CEP162Q5TB80 1403 aa18.79■□□□□ 0.6
SVEP1-201ENST00000374461 LAMC3Q9Y6N6 1575 aa18.78■□□□□ 0.6
SVEP1-201ENST00000374461 TNIKQ9UKE5 1360 aa18.76■□□□□ 0.59
SVEP1-201ENST00000374461 TOPBP1Q92547 1522 aa18.75■□□□□ 0.59
SVEP1-201ENST00000374461 TDRD9Q8NDG6 1382 aaKnown RBP18.72■□□□□ 0.59
SVEP1-201ENST00000374461 PRDM2Q13029 1718 aa18.72■□□□□ 0.59
SVEP1-201ENST00000374461 URB2Q14146 1524 aaKnown RBP18.72■□□□□ 0.59
SVEP1-201ENST00000374461 POLA1P09884 1462 aaPredicted RBP18.71■□□□□ 0.59
SVEP1-201ENST00000374461 ERCC6Q03468 1493 aa18.69■□□□□ 0.58
SVEP1-201ENST00000374461 IGF1RP08069 1367 aa18.67■□□□□ 0.58
SVEP1-201ENST00000374461 DNMBPQ6XZF7 1577 aa18.67■□□□□ 0.58
SVEP1-201ENST00000374461 TRIM26Q12899 539 aaPredicted RBP18.66■□□□□ 0.58
SVEP1-201ENST00000374461 KIF21AQ7Z4S6 1674 aa18.64■□□□□ 0.57
SVEP1-201ENST00000374461 CLIP1P30622 1438 aa18.63■□□□□ 0.57
SVEP1-201ENST00000374461 CARMIL1Q5VZK9 1371 aa18.63■□□□□ 0.57
SVEP1-201ENST00000374461 PRXQ9BXM0 1461 aa18.6■□□□□ 0.57
SVEP1-201ENST00000374461 P3H3Q8IVL6 736 aa18.59■□□□□ 0.57
SVEP1-201ENST00000374461 KIF21BO75037 1637 aa18.59■□□□□ 0.57
SVEP1-201ENST00000374461 APLP2Q06481 763 aa18.56■□□□□ 0.56
SVEP1-201ENST00000374461 MRC2Q9UBG0 1479 aa18.53■□□□□ 0.56
SVEP1-201ENST00000374461 ABCA10Q8WWZ4 1543 aa18.52■□□□□ 0.56
SVEP1-201ENST00000374461 ATP1B4Q9UN42 357 aaPredicted RBP18.52■□□□□ 0.56
SVEP1-201ENST00000374461 AQRO60306 1485 aaKnown RBP eCLIP18.51■□□□□ 0.55
SVEP1-201ENST00000374461 FBLN2P98095 1184 aa18.48■□□□□ 0.55
SVEP1-201ENST00000374461 GAPVD1Q14C86 1478 aa18.48■□□□□ 0.55
SVEP1-201ENST00000374461 ERICH3Q5RHP9 1530 aa18.45■□□□□ 0.54
SVEP1-201ENST00000374461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.43■□□□□ 0.54
SVEP1-201ENST00000374461 ZNF608Q9ULD9 1512 aaPredicted RBP18.41■□□□□ 0.54
SVEP1-201ENST00000374461 VPS8Q8N3P4 1428 aa18.37■□□□□ 0.53
SVEP1-201ENST00000374461 ARAP1Q96P48 1450 aa18.35■□□□□ 0.53
SVEP1-201ENST00000374461 CCER1Q8TC90 406 aaPredicted RBP18.34■□□□□ 0.53
SVEP1-201ENST00000374461 TARBP1Q13395 1621 aaKnown RBP18.32■□□□□ 0.52
SVEP1-201ENST00000374461 ARHGAP35Q9NRY4 1499 aa18.31■□□□□ 0.52
SVEP1-201ENST00000374461 WDR62O43379 1518 aa18.3■□□□□ 0.52
SVEP1-201ENST00000374461 CHMP7Q8WUX9 453 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms