RNA–Protein interactions for RNA: ENST00000374454.1

PDZD11-202, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PDZD11, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-202ENST00000374454 NISCHQ9Y2I1 1504 aa23.62■■□□□ 1.37
PDZD11-202ENST00000374454 CCDC180Q9P1Z9 1646 aa20.83■□□□□ 0.93
PDZD11-202ENST00000374454 ABCC9O60706 1549 aa20.14■□□□□ 0.81
PDZD11-202ENST00000374454 ZCCHC6Q5VYS8 1495 aaKnown RBP19.72■□□□□ 0.75
PDZD11-202ENST00000374454 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
PDZD11-202ENST00000374454 MYO15BQ96JP2 1530 aa19.59■□□□□ 0.73
PDZD11-202ENST00000374454 DCAF1Q9Y4B6 1507 aa19.59■□□□□ 0.73
PDZD11-202ENST00000374454 NACADO15069 1562 aa19.57■□□□□ 0.72
PDZD11-202ENST00000374454 RB1CC1Q8TDY2 1594 aa19.51■□□□□ 0.71
PDZD11-202ENST00000374454 SCRIBQ14160 1630 aa19■□□□□ 0.63
PDZD11-202ENST00000374454 UNC13AQ9UPW8 1703 aa18.98■□□□□ 0.63
PDZD11-202ENST00000374454 PABPN1Q86U42 306 aaKnown RBP eCLIP18.91■□□□□ 0.62
PDZD11-202ENST00000374454 BICRAQ9NZM4 1560 aa18.9■□□□□ 0.62
PDZD11-202ENST00000374454 SHROOM4Q9ULL8 1493 aa18.78■□□□□ 0.6
PDZD11-202ENST00000374454 EIF4G1Q04637 1599 aaKnown RBP18.38■□□□□ 0.53
PDZD11-202ENST00000374454 CECR2Q9BXF3 1484 aa18.35■□□□□ 0.53
PDZD11-202ENST00000374454 DNAJC5BQ9UF47 199 aa18.31■□□□□ 0.52
PDZD11-202ENST00000374454 BAZ1AQ9NRL2 1556 aaPredicted RBP18.28■□□□□ 0.52
PDZD11-202ENST00000374454 SMARCA4P51532 1647 aa18.23■□□□□ 0.51
PDZD11-202ENST00000374454 CC2D2AQ9P2K1 1620 aa18.23■□□□□ 0.51
PDZD11-202ENST00000374454 MROH2BQ7Z745 1585 aa18.19■□□□□ 0.5
PDZD11-202ENST00000374454 ATAD2BQ9ULI0 1458 aa18.12■□□□□ 0.49
PDZD11-202ENST00000374454 RSF1Q96T23 1441 aaPredicted RBP18.11■□□□□ 0.49
PDZD11-202ENST00000374454 NCAPD3P42695 1498 aa18.1■□□□□ 0.49
PDZD11-202ENST00000374454 SMARCA2P51531 1590 aa18.09■□□□□ 0.49
PDZD11-202ENST00000374454 PEG3Q9GZU2 1588 aa18.09■□□□□ 0.49
PDZD11-202ENST00000374454 HMGXB3Q12766 1538 aa17.98■□□□□ 0.47
PDZD11-202ENST00000374454 WIZO95785 1651 aa17.96■□□□□ 0.47
PDZD11-202ENST00000374454 BAZ1BQ9UIG0 1483 aaKnown RBP17.95■□□□□ 0.46
PDZD11-202ENST00000374454 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
PDZD11-202ENST00000374454 SUPT5HO00267 1087 aaKnown RBP17.82■□□□□ 0.44
PDZD11-202ENST00000374454 CCDC88BA6NC98 1476 aa17.64■□□□□ 0.41
PDZD11-202ENST00000374454 CADPSQ9ULU8 1353 aa17.58■□□□□ 0.4
PDZD11-202ENST00000374454 LAMC3Q9Y6N6 1575 aa17.53■□□□□ 0.4
PDZD11-202ENST00000374454 CFTRP13569 1480 aa17.51■□□□□ 0.39
PDZD11-202ENST00000374454 NESP48681 1621 aa17.5■□□□□ 0.39
PDZD11-202ENST00000374454 PDS5BQ9NTI5 1447 aa17.45■□□□□ 0.38
PDZD11-202ENST00000374454 ERCC6Q03468 1493 aa17.35■□□□□ 0.37
PDZD11-202ENST00000374454 FANCD2Q9BXW9 1451 aa17.33■□□□□ 0.37
PDZD11-202ENST00000374454 PRDM2Q13029 1718 aa17.28■□□□□ 0.36
PDZD11-202ENST00000374454 CEP164Q9UPV0 1460 aa17.28■□□□□ 0.36
PDZD11-202ENST00000374454 KIF21AQ7Z4S6 1674 aa17.25■□□□□ 0.35
PDZD11-202ENST00000374454 MRC2Q9UBG0 1479 aa17.21■□□□□ 0.35
PDZD11-202ENST00000374454 THOC2Q8NI27 1593 aaKnown RBP17.16■□□□□ 0.34
PDZD11-202ENST00000374454 ABCC8Q09428 1581 aa17.15■□□□□ 0.34
PDZD11-202ENST00000374454 WDR62O43379 1518 aa17.14■□□□□ 0.33
PDZD11-202ENST00000374454 URB2Q14146 1524 aaKnown RBP17.13■□□□□ 0.33
PDZD11-202ENST00000374454 CUX2O14529 1486 aa17.11■□□□□ 0.33
PDZD11-202ENST00000374454 TOPBP1Q92547 1522 aa17.08■□□□□ 0.32
PDZD11-202ENST00000374454 DNMBPQ6XZF7 1577 aa17.07■□□□□ 0.32
PDZD11-202ENST00000374454 WRNQ14191 1432 aaPredicted RBP eCLIP17.05■□□□□ 0.32
PDZD11-202ENST00000374454 CUX1P39880 1505 aa17.04■□□□□ 0.32
PDZD11-202ENST00000374454 TOP2BQ02880 1626 aa16.96■□□□□ 0.31
PDZD11-202ENST00000374454 POLA1P09884 1462 aaPredicted RBP16.95■□□□□ 0.3
PDZD11-202ENST00000374454 SYNJ1O43426 1573 aa16.94■□□□□ 0.3
PDZD11-202ENST00000374454 FGD5Q6ZNL6 1462 aa16.94■□□□□ 0.3
PDZD11-202ENST00000374454 BIVM-ERCC5R4GMW8 1640 aa16.94■□□□□ 0.3
PDZD11-202ENST00000374454 IFT140Q96RY7 1462 aa16.93■□□□□ 0.3
PDZD11-202ENST00000374454 SOGA1O94964 1423 aa16.93■□□□□ 0.3
PDZD11-202ENST00000374454 RAD54L2Q9Y4B4 1467 aa16.87■□□□□ 0.29
PDZD11-202ENST00000374454 TARBP1Q13395 1621 aaKnown RBP16.86■□□□□ 0.29
PDZD11-202ENST00000374454 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
PDZD11-202ENST00000374454 CHIC1Q5VXU3 224 aa16.83■□□□□ 0.28
PDZD11-202ENST00000374454 ABCA10Q8WWZ4 1543 aa16.82■□□□□ 0.28
PDZD11-202ENST00000374454 ZNF608Q9ULD9 1512 aaPredicted RBP16.8■□□□□ 0.28
PDZD11-202ENST00000374454 TDRD9Q8NDG6 1382 aaKnown RBP16.78■□□□□ 0.28
PDZD11-202ENST00000374454 WDR97A6NE52 1622 aa16.78■□□□□ 0.28
PDZD11-202ENST00000374454 AQRO60306 1485 aaKnown RBP eCLIP16.76■□□□□ 0.27
PDZD11-202ENST00000374454 GAPVD1Q14C86 1478 aa16.72■□□□□ 0.27
PDZD11-202ENST00000374454 EIF4G3O43432 1585 aaKnown RBP16.71■□□□□ 0.27
PDZD11-202ENST00000374454 KIF27Q86VH2 1401 aa16.7■□□□□ 0.26
PDZD11-202ENST00000374454 GRIN2BQ13224 1484 aa16.68■□□□□ 0.26
PDZD11-202ENST00000374454 ABCA5Q8WWZ7 1642 aa16.68■□□□□ 0.26
PDZD11-202ENST00000374454 IGF1RP08069 1367 aa16.62■□□□□ 0.25
PDZD11-202ENST00000374454 ERICH3Q5RHP9 1530 aa16.61■□□□□ 0.25
PDZD11-202ENST00000374454 MAGI1Q96QZ7 1491 aaPredicted RBP16.61■□□□□ 0.25
PDZD11-202ENST00000374454 SNAPC4Q5SXM2 1469 aa16.59■□□□□ 0.25
PDZD11-202ENST00000374454 RUSC2Q8N2Y8 1516 aa16.59■□□□□ 0.25
PDZD11-202ENST00000374454 PBRM1Q86U86 1689 aa16.57■□□□□ 0.24
PDZD11-202ENST00000374454 EEA1Q15075 1411 aa16.57■□□□□ 0.24
PDZD11-202ENST00000374454 FHAD1B1AJZ9 1412 aa16.55■□□□□ 0.24
PDZD11-202ENST00000374454 CHMP7Q8WUX9 453 aaPredicted RBP16.54■□□□□ 0.24
PDZD11-202ENST00000374454 SYNJ2O15056 1496 aa16.54■□□□□ 0.24
PDZD11-202ENST00000374454 CSRNP3Q8WYN3 585 aa16.52■□□□□ 0.24
PDZD11-202ENST00000374454 CARMIL1Q5VZK9 1371 aa16.51■□□□□ 0.23
PDZD11-202ENST00000374454 FBLN2P98095 1184 aa16.51■□□□□ 0.23
PDZD11-202ENST00000374454 ADAMTS12P58397 1594 aa16.51■□□□□ 0.23
PDZD11-202ENST00000374454 OSCARQ8IYS5 282 aa16.49■□□□□ 0.23
PDZD11-202ENST00000374454 CUL7Q14999 1698 aa16.48■□□□□ 0.23
PDZD11-202ENST00000374454 FAM9AQ8IZU1 332 aaPredicted RBP16.45■□□□□ 0.22
PDZD11-202ENST00000374454 GRIN2AQ12879 1464 aa16.45■□□□□ 0.22
PDZD11-202ENST00000374454 PRXQ9BXM0 1461 aa16.44■□□□□ 0.22
PDZD11-202ENST00000374454 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
PDZD11-202ENST00000374454 CHD1O14646 1710 aa16.42■□□□□ 0.22
PDZD11-202ENST00000374454 NUP160Q12769 1436 aa16.39■□□□□ 0.21
PDZD11-202ENST00000374454 DNAJC5Q9H3Z4 198 aa16.33■□□□□ 0.2
PDZD11-202ENST00000374454 CEP170Q5SW79 1584 aa16.33■□□□□ 0.2
PDZD11-202ENST00000374454 KIF21BO75037 1637 aa16.31■□□□□ 0.2
PDZD11-202ENST00000374454 CLASP1Q7Z460 1538 aa16.31■□□□□ 0.2
PDZD11-202ENST00000374454 KIAA0586Q9BVV6 1533 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms