RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 NISCHQ9Y2I1 1504 aa22.76■■□□□ 1.23
TMEM254-201ENST00000372273 CCDC180Q9P1Z9 1646 aa19.99■□□□□ 0.79
TMEM254-201ENST00000372273 ABCC9O60706 1549 aa19.77■□□□□ 0.76
TMEM254-201ENST00000372273 DCAF8L2P0C7V8 631 aa19.28■□□□□ 0.68
TMEM254-201ENST00000372273 ZCCHC6Q5VYS8 1495 aaKnown RBP18.96■□□□□ 0.63
TMEM254-201ENST00000372273 RB1CC1Q8TDY2 1594 aa18.86■□□□□ 0.61
TMEM254-201ENST00000372273 NACADO15069 1562 aa18.84■□□□□ 0.61
TMEM254-201ENST00000372273 MYO15BQ96JP2 1530 aa18.7■□□□□ 0.58
TMEM254-201ENST00000372273 DCAF1Q9Y4B6 1507 aa18.69■□□□□ 0.58
TMEM254-201ENST00000372273 PABPN1Q86U42 306 aaKnown RBP eCLIP18.62■□□□□ 0.57
TMEM254-201ENST00000372273 SCRIBQ14160 1630 aa18.49■□□□□ 0.55
TMEM254-201ENST00000372273 UNC13AQ9UPW8 1703 aa18.44■□□□□ 0.54
TMEM254-201ENST00000372273 BICRAQ9NZM4 1560 aa18.37■□□□□ 0.53
TMEM254-201ENST00000372273 SHROOM4Q9ULL8 1493 aa18.34■□□□□ 0.53
TMEM254-201ENST00000372273 DNAJC5BQ9UF47 199 aa18.18■□□□□ 0.5
TMEM254-201ENST00000372273 EIF4G1Q04637 1599 aaKnown RBP17.87■□□□□ 0.45
TMEM254-201ENST00000372273 CECR2Q9BXF3 1484 aa17.86■□□□□ 0.45
TMEM254-201ENST00000372273 CC2D2AQ9P2K1 1620 aa17.79■□□□□ 0.44
TMEM254-201ENST00000372273 MROH2BQ7Z745 1585 aa17.62■□□□□ 0.41
TMEM254-201ENST00000372273 SMARCA4P51532 1647 aa17.6■□□□□ 0.41
TMEM254-201ENST00000372273 BAZ1AQ9NRL2 1556 aaPredicted RBP17.58■□□□□ 0.41
TMEM254-201ENST00000372273 ATAD2BQ9ULI0 1458 aa17.54■□□□□ 0.4
TMEM254-201ENST00000372273 NCAPD3P42695 1498 aa17.47■□□□□ 0.39
TMEM254-201ENST00000372273 RSF1Q96T23 1441 aaPredicted RBP17.47■□□□□ 0.39
TMEM254-201ENST00000372273 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
TMEM254-201ENST00000372273 WIZO95785 1651 aa17.41■□□□□ 0.38
TMEM254-201ENST00000372273 BAZ1BQ9UIG0 1483 aaKnown RBP17.39■□□□□ 0.37
TMEM254-201ENST00000372273 PEG3Q9GZU2 1588 aa17.36■□□□□ 0.37
TMEM254-201ENST00000372273 HMGXB3Q12766 1538 aa17.32■□□□□ 0.36
TMEM254-201ENST00000372273 SUPT5HO00267 1087 aaKnown RBP17.31■□□□□ 0.36
TMEM254-201ENST00000372273 NESP48681 1621 aa17.17■□□□□ 0.34
TMEM254-201ENST00000372273 TOP2AP11388 1531 aaKnown RBP17.14■□□□□ 0.33
TMEM254-201ENST00000372273 CCDC88BA6NC98 1476 aa17.06■□□□□ 0.32
TMEM254-201ENST00000372273 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.32
TMEM254-201ENST00000372273 ERCC6Q03468 1493 aa16.97■□□□□ 0.31
TMEM254-201ENST00000372273 LAMC3Q9Y6N6 1575 aa16.92■□□□□ 0.3
TMEM254-201ENST00000372273 CFTRP13569 1480 aa16.92■□□□□ 0.3
TMEM254-201ENST00000372273 PDS5BQ9NTI5 1447 aa16.88■□□□□ 0.29
TMEM254-201ENST00000372273 FANCD2Q9BXW9 1451 aa16.82■□□□□ 0.28
TMEM254-201ENST00000372273 KIF21AQ7Z4S6 1674 aa16.81■□□□□ 0.28
TMEM254-201ENST00000372273 CEP164Q9UPV0 1460 aa16.75■□□□□ 0.27
TMEM254-201ENST00000372273 THOC2Q8NI27 1593 aaKnown RBP16.7■□□□□ 0.26
TMEM254-201ENST00000372273 MRC2Q9UBG0 1479 aa16.69■□□□□ 0.26
TMEM254-201ENST00000372273 URB2Q14146 1524 aaKnown RBP16.67■□□□□ 0.26
TMEM254-201ENST00000372273 CUX2O14529 1486 aa16.62■□□□□ 0.25
TMEM254-201ENST00000372273 WDR62O43379 1518 aa16.6■□□□□ 0.25
TMEM254-201ENST00000372273 PRDM2Q13029 1718 aa16.58■□□□□ 0.24
TMEM254-201ENST00000372273 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
TMEM254-201ENST00000372273 ABCC8Q09428 1581 aa16.51■□□□□ 0.23
TMEM254-201ENST00000372273 CUX1P39880 1505 aa16.5■□□□□ 0.23
TMEM254-201ENST00000372273 DNMBPQ6XZF7 1577 aa16.47■□□□□ 0.23
TMEM254-201ENST00000372273 RAD54L2Q9Y4B4 1467 aa16.45■□□□□ 0.22
TMEM254-201ENST00000372273 POLA1P09884 1462 aaPredicted RBP16.44■□□□□ 0.22
TMEM254-201ENST00000372273 WRNQ14191 1432 aaPredicted RBP eCLIP16.44■□□□□ 0.22
TMEM254-201ENST00000372273 ZNF608Q9ULD9 1512 aaPredicted RBP16.43■□□□□ 0.22
TMEM254-201ENST00000372273 FGD5Q6ZNL6 1462 aa16.42■□□□□ 0.22
TMEM254-201ENST00000372273 SOGA1O94964 1423 aa16.4■□□□□ 0.22
TMEM254-201ENST00000372273 SYNJ1O43426 1573 aa16.39■□□□□ 0.21
TMEM254-201ENST00000372273 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
TMEM254-201ENST00000372273 AQRO60306 1485 aaKnown RBP eCLIP16.38■□□□□ 0.21
TMEM254-201ENST00000372273 IFT140Q96RY7 1462 aa16.36■□□□□ 0.21
TMEM254-201ENST00000372273 TARBP1Q13395 1621 aaKnown RBP16.32■□□□□ 0.2
TMEM254-201ENST00000372273 TOP2BQ02880 1626 aa16.31■□□□□ 0.2
TMEM254-201ENST00000372273 BIVM-ERCC5R4GMW8 1640 aa16.25■□□□□ 0.19
TMEM254-201ENST00000372273 EIF4G3O43432 1585 aaKnown RBP16.25■□□□□ 0.19
TMEM254-201ENST00000372273 TRIM41Q8WV44 630 aa16.24■□□□□ 0.19
TMEM254-201ENST00000372273 FBLN2P98095 1184 aa16.23■□□□□ 0.19
TMEM254-201ENST00000372273 ABCA10Q8WWZ4 1543 aa16.21■□□□□ 0.19
TMEM254-201ENST00000372273 GAPVD1Q14C86 1478 aa16.18■□□□□ 0.18
TMEM254-201ENST00000372273 DNAJC5Q9H3Z4 198 aa16.15■□□□□ 0.18
TMEM254-201ENST00000372273 SNAPC4Q5SXM2 1469 aa16.14■□□□□ 0.17
TMEM254-201ENST00000372273 WDR97A6NE52 1622 aa16.14■□□□□ 0.17
TMEM254-201ENST00000372273 CHIC1Q5VXU3 224 aa16.14■□□□□ 0.17
TMEM254-201ENST00000372273 GRIN2BQ13224 1484 aa16.13■□□□□ 0.17
TMEM254-201ENST00000372273 OSCARQ8IYS5 282 aa16.12■□□□□ 0.17
TMEM254-201ENST00000372273 CHMP7Q8WUX9 453 aaPredicted RBP16.11■□□□□ 0.17
TMEM254-201ENST00000372273 RUSC2Q8N2Y8 1516 aa16.1■□□□□ 0.17
TMEM254-201ENST00000372273 ABCA5Q8WWZ7 1642 aa16.1■□□□□ 0.17
TMEM254-201ENST00000372273 IGF1RP08069 1367 aa16.06■□□□□ 0.16
TMEM254-201ENST00000372273 KIF27Q86VH2 1401 aa16.05■□□□□ 0.16
TMEM254-201ENST00000372273 FAM9AQ8IZU1 332 aaPredicted RBP16.04■□□□□ 0.16
TMEM254-201ENST00000372273 MAGI1Q96QZ7 1491 aaPredicted RBP16.03■□□□□ 0.16
TMEM254-201ENST00000372273 PBRM1Q86U86 1689 aa16.02■□□□□ 0.16
TMEM254-201ENST00000372273 SYNJ2O15056 1496 aa16.01■□□□□ 0.15
TMEM254-201ENST00000372273 CHD1O14646 1710 aa15.99■□□□□ 0.15
TMEM254-201ENST00000372273 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
TMEM254-201ENST00000372273 FHAD1B1AJZ9 1412 aa15.97■□□□□ 0.15
TMEM254-201ENST00000372273 ADAMTS12P58397 1594 aa15.95■□□□□ 0.14
TMEM254-201ENST00000372273 EHMT2Q96KQ7 1210 aa15.95■□□□□ 0.14
TMEM254-201ENST00000372273 CARMIL1Q5VZK9 1371 aa15.94■□□□□ 0.14
TMEM254-201ENST00000372273 GRIN2AQ12879 1464 aa15.93■□□□□ 0.14
TMEM254-201ENST00000372273 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
TMEM254-201ENST00000372273 CEP170Q5SW79 1584 aa15.86■□□□□ 0.13
TMEM254-201ENST00000372273 NUP160Q12769 1436 aa15.84■□□□□ 0.13
TMEM254-201ENST00000372273 CLASP1Q7Z460 1538 aa15.82■□□□□ 0.12
TMEM254-201ENST00000372273 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
TMEM254-201ENST00000372273 CUL7Q14999 1698 aa15.8■□□□□ 0.12
TMEM254-201ENST00000372273 ARHGEF11O15085 1522 aa15.8■□□□□ 0.12
TMEM254-201ENST00000372273 RAPGEF2Q9Y4G8 1499 aa15.8■□□□□ 0.12
TMEM254-201ENST00000372273 JPH4Q96JJ6 628 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms